RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 C5orf63A6NC05 138 aa8.7□□□□□ -1.02
RAB5B-206ENST00000549505 CNOT4O95628 575 aaKnown RBP8.7□□□□□ -1.02
RAB5B-206ENST00000549505 ABOP16442 354 aa8.7□□□□□ -1.02
RAB5B-206ENST00000549505 PTGFRP43088 359 aa8.7□□□□□ -1.02
RAB5B-206ENST00000549505 UBE2MP61081 183 aaKnown RBP8.7□□□□□ -1.02
RAB5B-206ENST00000549505 ANGPTL5Q86XS5 388 aa8.7□□□□□ -1.02
RAB5B-206ENST00000549505 PXT1Q8NFP0 134 aa8.7□□□□□ -1.02
RAB5B-206ENST00000549505 OR56B1Q8NGI3 324 aa8.7□□□□□ -1.02
RAB5B-206ENST00000549505 ROBO4Q8WZ75 1007 aa8.7□□□□□ -1.02
RAB5B-206ENST00000549505 GCDHQ92947 438 aaPredicted RBP8.7□□□□□ -1.02
RAB5B-206ENST00000549505 SOX7Q9BT81 388 aa8.7□□□□□ -1.02
RAB5B-206ENST00000549505 ZNF436Q9C0F3 470 aaPredicted RBP8.7□□□□□ -1.02
RAB5B-206ENST00000549505 TRAV6A0A075B6T7 132 aa8.7□□□□□ -1.02
RAB5B-206ENST00000549505 VSIG10L2P0DP72 767 aa8.7□□□□□ -1.02
RAB5B-206ENST00000549505 EIF1AXP47813 144 aaKnown RBP8.7□□□□□ -1.02
RAB5B-206ENST00000549505 CD83Q01151 205 aa8.7□□□□□ -1.02
RAB5B-206ENST00000549505 Q5BKY6 102 aa8.7□□□□□ -1.02
RAB5B-206ENST00000549505 SKA3Q8IX90 412 aa8.7□□□□□ -1.02
RAB5B-206ENST00000549505 SAXO1Q8IYX7 474 aa8.7□□□□□ -1.02
RAB5B-206ENST00000549505 TMEM178AQ8NBL3 297 aa8.7□□□□□ -1.02
RAB5B-206ENST00000549505 STEAP2Q8NFT2 490 aa8.7□□□□□ -1.02
RAB5B-206ENST00000549505 OR13C9Q8NGT0 318 aa8.7□□□□□ -1.02
RAB5B-206ENST00000549505 PHF21AQ96BD5 680 aa8.7□□□□□ -1.02
RAB5B-206ENST00000549505 MRPS24Q96EL2 167 aaKnown RBP8.7□□□□□ -1.02
RAB5B-206ENST00000549505 KCNK15Q9H427 330 aa8.7□□□□□ -1.02
RAB5B-206ENST00000549505 MCTS1Q9ULC4 181 aaKnown RBP8.7□□□□□ -1.02
RAB5B-206ENST00000549505 SSUH2Q9Y2M2 353 aa8.7□□□□□ -1.02
RAB5B-206ENST00000549505 PTPRBP23467 1997 aa8.7□□□□□ -1.02
RAB5B-206ENST00000549505 RRP8O43159 456 aaKnown RBP8.69□□□□□ -1.02
RAB5B-206ENST00000549505 HIST1H1DP16402 221 aaKnown RBP8.69□□□□□ -1.02
RAB5B-206ENST00000549505 ITGA3P26006 1051 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 STARP49675 285 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 TNFSF10P50591 281 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 PRKXP51817 358 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 OC90Q02509 493 aaPredicted RBP8.69□□□□□ -1.02
RAB5B-206ENST00000549505 GUCA2AQ02747 115 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 KISS1Q15726 138 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 SRSF7Q16629 238 aaKnown RBP eCLIP8.69□□□□□ -1.02
RAB5B-206ENST00000549505 LUZP2Q86TE4 346 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 ASCC1Q8N9N2 400 aaKnown RBP8.69□□□□□ -1.02
RAB5B-206ENST00000549505 ZSCAN4Q8NAM6 433 aaPredicted RBP8.69□□□□□ -1.02
RAB5B-206ENST00000549505 UXS1Q8NBZ7 420 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 SEMA6DQ8NFY4 1073 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 ZNF845Q96IR2 970 aaPredicted RBP8.69□□□□□ -1.02
RAB5B-206ENST00000549505 ZNF75AQ96N20 296 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 DECR2Q9NUI1 292 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 ING4Q9UNL4 249 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 KCNK7Q9Y2U2 307 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 SYNGR4O95473 234 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 CD3DP04234 171 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 ZNF32P17041 273 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 MAGEA5P43359 124 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 VEGFCP49767 419 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 P2RX3P56373 397 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 TMEM50BP56557 158 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 CEACAM16Q2WEN9 425 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 SNAI3Q3KNW1 292 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 CDNFQ49AH0 187 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 GLIPR1L1Q6UWM5 242 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 Q6ZTK2 550 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 MRGPRFQ96AM1 343 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 MS4A3Q96HJ5 214 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 PRRT1Q99946 306 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 NOSIPQ9Y314 301 aaKnown RBP8.69□□□□□ -1.02
RAB5B-206ENST00000549505 TNRC6AQ8NDV7 1962 aaKnown RBP8.69□□□□□ -1.02
RAB5B-206ENST00000549505 FAM90A10PA6NDY2 464 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 FAM90A18PA6NE21 464 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 FAM90A16PA6NEW6 464 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 FAM90A20PA6NIJ5 464 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 FAM90A8PA6NJQ4 464 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 FAM90A7PA6NKC0 464 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 FAM90A22PA8MWA6 464 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 FAM90A12PA8MX19 464 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 FAM90A5PA8MXJ8 464 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 FAM90A23PA8MXZ1 464 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 PYCARD-AS1I3L0S3 204 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 TSPAN4O14817 238 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 ARPC1BO15143 372 aaKnown RBP8.69□□□□□ -1.02
RAB5B-206ENST00000549505 TRAPPC6AO75865 159 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 CELA3AP09093 270 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 FAM90A15PP0C7V4 464 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 FAM90A13PP0C7W8 464 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 FAM90A14PP0C7W9 464 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 FAM90A24PP0C7X0 464 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 PTHLHP12272 177 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 HOXB1P14653 301 aaPredicted RBP8.69□□□□□ -1.02
RAB5B-206ENST00000549505 RAD52P43351 418 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 RAP2BP61225 183 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 SLC10A1Q14973 349 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 NHLRC3Q5JS37 347 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 PLAC9Q5JTB6 97 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 CLVS2Q5SYC1 327 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 TSPO2Q5TGU0 170 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 SFRP4Q6FHJ7 346 aaPredicted RBP8.69□□□□□ -1.02
RAB5B-206ENST00000549505 IGFL3Q6UXB1 125 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 LHFPL2Q6ZUX7 228 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.69□□□□□ -1.02
RAB5B-206ENST00000549505 FJX1Q86VR8 437 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 OR4D10Q8NGI6 311 aa8.69□□□□□ -1.02
RAB5B-206ENST00000549505 OR13C8Q8NGS7 320 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms