RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 PARPBPQ9NWS1 579 aa17.29■□□□□ 0.36
CTDSP2-204ENST00000548823 CLCF1Q9UBD9 225 aa17.29■□□□□ 0.36
CTDSP2-204ENST00000548823 CKLFQ9UBR5 152 aa17.29■□□□□ 0.36
CTDSP2-204ENST00000548823 hCG_2014768A0A024R1R8 64 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 ACSM4P0C7M7 580 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 CCKARP32238 428 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 NTF4P34130 210 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 BCAP31P51572 246 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 PITPNAQ00169 270 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 ODF4Q2M2E3 257 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 PLXDC2Q6UX71 529 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 ZNF611Q8N823 705 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 LGALS14Q8TCE9 139 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 RAB40AQ8WXH6 277 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 ZC3HAV1LQ96H79 300 aaKnown RBP17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 BCO1Q9HAY6 547 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 ELOVL5Q9NYP7 299 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 C16orf97H3BN30 126 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 CTDSPLO15194 276 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 RER1O15258 196 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 UBL3O95164 117 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 CRHP06850 196 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 CCL1P22362 96 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 OTX1P32242 354 aaPredicted RBP17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 SRYQ05066 204 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 RNPS1Q15287 305 aaKnown RBP17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 HES5Q5TA89 166 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 ZNF474Q6S9Z5 364 aaPredicted RBP17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 GDPD3Q7L5L3 318 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 CCDC54Q8NEL0 328 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 OR13C3Q8NGS6 347 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 STARD4Q96DR4 205 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 GP6Q9HCN6 339 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 ZNF275Q9NSD4 429 aaPredicted RBP17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 TMEM38BQ9NVV0 291 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 STEAP1Q9UHE8 339 aa17.28■□□□□ 0.36
CTDSP2-204ENST00000548823 FUOMA2VDF0 154 aa17.27■□□□□ 0.35
CTDSP2-204ENST00000548823 PFDN1O60925 122 aa17.27■□□□□ 0.35
CTDSP2-204ENST00000548823 MNDAP41218 407 aa17.27■□□□□ 0.35
CTDSP2-204ENST00000548823 ECH1Q13011 328 aa17.27■□□□□ 0.35
CTDSP2-204ENST00000548823 BEX5Q5H9J7 111 aa17.27■□□□□ 0.35
CTDSP2-204ENST00000548823 ELFN2Q5R3F8 820 aa17.27■□□□□ 0.35
CTDSP2-204ENST00000548823 TRIQKQ629K1 86 aa17.27■□□□□ 0.35
CTDSP2-204ENST00000548823 ASPHD2Q6ICH7 369 aa17.27■□□□□ 0.35
CTDSP2-204ENST00000548823 FAM166AQ6J272 317 aa17.27■□□□□ 0.35
CTDSP2-204ENST00000548823 ABHD3Q8WU67 409 aa17.27■□□□□ 0.35
CTDSP2-204ENST00000548823 LIN7BQ9HAP6 207 aa17.27■□□□□ 0.35
CTDSP2-204ENST00000548823 NOSIPQ9Y314 301 aaKnown RBP17.27■□□□□ 0.35
CTDSP2-204ENST00000548823 RPL36A-HNRNPH2H7BZ11 118 aa17.26■□□□□ 0.35
CTDSP2-204ENST00000548823 P2RY10O00398 339 aa17.26■□□□□ 0.35
CTDSP2-204ENST00000548823 SLC17A2O00624 439 aa17.26■□□□□ 0.35
CTDSP2-204ENST00000548823 HS3ST1O14792 307 aa17.26■□□□□ 0.35
CTDSP2-204ENST00000548823 SULT1B1O43704 296 aa17.26■□□□□ 0.35
CTDSP2-204ENST00000548823 MAS1P04201 325 aa17.26■□□□□ 0.35
CTDSP2-204ENST00000548823 RANBP1P43487 201 aa17.26■□□□□ 0.35
CTDSP2-204ENST00000548823 CCDC92Q53HC0 331 aaPredicted RBP17.26■□□□□ 0.35
CTDSP2-204ENST00000548823 GLT8D1Q68CQ7 371 aa17.26■□□□□ 0.35
CTDSP2-204ENST00000548823 C22orf34Q6ZV56 151 aa17.26■□□□□ 0.35
CTDSP2-204ENST00000548823 PRSS45Q7RTY3 260 aa17.26■□□□□ 0.35
CTDSP2-204ENST00000548823 NKAIN3Q8N8D7 197 aa17.26■□□□□ 0.35
CTDSP2-204ENST00000548823 C19orf18Q8NEA5 215 aa17.26■□□□□ 0.35
CTDSP2-204ENST00000548823 FOXRED1Q96CU9 486 aaPredicted RBP17.26■□□□□ 0.35
CTDSP2-204ENST00000548823 HDHD2Q9H0R4 259 aa17.26■□□□□ 0.35
CTDSP2-204ENST00000548823 SLCO5A1Q9H2Y9 848 aa17.26■□□□□ 0.35
CTDSP2-204ENST00000548823 CRLF2Q9HC73 371 aa17.26■□□□□ 0.35
CTDSP2-204ENST00000548823 GPR35Q9HC97 309 aa17.26■□□□□ 0.35
CTDSP2-204ENST00000548823 MALT1Q9UDY8 824 aa17.26■□□□□ 0.35
CTDSP2-204ENST00000548823 OR5V1Q9UGF6 321 aa17.26■□□□□ 0.35
CTDSP2-204ENST00000548823 A0A0G2JMP0 313 aa17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 A0A0X1KG70 313 aa17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 A0A1B0GTI1 187 aa17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 A0A1B0GVI7 797 aa17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 SYT7O43581 403 aa17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 GSTZ1O43708 216 aaPredicted RBP17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 MRPL33O75394 65 aaKnown RBP17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 CX3CR1P49238 355 aa17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 MMP15P51511 669 aa17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 CAPZA1P52907 286 aa17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 ZNF121P58317 390 aaPredicted RBP17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 SCRN3Q0VDG4 424 aa17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 RAB35Q15286 201 aa17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 C11orf91Q3C1V1 193 aa17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 VWA1Q6PCB0 445 aa17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 Q6ZSR3 168 aa17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 CMTM4Q8IZR5 234 aa17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 ZNF283Q8N7M2 679 aa17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 OR4M2Q8NGB6 313 aa17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 C15orf40Q8WUR7 153 aa17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 FOXB1Q99853 325 aa17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 BEX2Q9BXY8 128 aa17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 SLC22A4Q9H015 551 aa17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 SLC17A5Q9NRA2 495 aa17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 TMEM160Q9NX00 188 aa17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 LAMP3Q9UQV4 416 aa17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 ZNF175Q9Y473 711 aa17.25■□□□□ 0.35
CTDSP2-204ENST00000548823 A0A0B4J203 849 aa17.24■□□□□ 0.35
CTDSP2-204ENST00000548823 A0A0U1RQV5 110 aa17.24■□□□□ 0.35
CTDSP2-204ENST00000548823 LOC390937A0A1W2PQ73 354 aa17.24■□□□□ 0.35
CTDSP2-204ENST00000548823 OVOL3O00110 214 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms