RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 CST1P01037 141 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 P04436 131 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 BTCP35070 178 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 NPBWR2P48146 333 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 SPINT3P49223 89 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 ERVK-25P63136 954 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 DCDP81605 110 aaKnown RBP2.71□□□□□ -1.98
PTCH1-216ENST00000548379 ART3Q13508 389 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 IL18Q14116 193 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 KIAA0087Q14695 138 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 NCF4Q15080 339 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 KRTAP21-3Q3LHN1 58 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 HSP90AA4PQ58FG1 418 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 HENMT1Q5T8I9 393 aaKnown RBP2.71□□□□□ -1.98
PTCH1-216ENST00000548379 MLIPQ5VWP3 458 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 IGFL3Q6UXB1 125 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 Q6ZS92 163 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 COX15Q7KZN9 410 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 BZW1Q7L1Q6 419 aaKnown RBP2.71□□□□□ -1.98
PTCH1-216ENST00000548379 OFCC1Q8IZS5 231 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 KIR2DL5AQ8N109 375 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 TRAM1L1Q8N609 369 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 NPWQ8N729 165 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 Q8N7P7 452 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 ACOT4Q8N9L9 421 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 NPBQ8NG41 125 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 KIR2DL5BQ8NHK3 375 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 RNF138Q8WVD3 245 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 PIH1D2Q8WWB5 315 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 MCUR1Q96AQ8 359 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 CYYR1Q96J86 154 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 MS4A4EQ96PG1 132 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 LYSMD1Q96S90 227 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 SNRNP25Q9BV90 132 aaKnown RBP2.71□□□□□ -1.98
PTCH1-216ENST00000548379 MFFQ9GZY8 342 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 GBA3Q9H227 469 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 SRMSQ9H3Y6 488 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 NANOGQ9H9S0 305 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 CCL28Q9NRJ3 127 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 RBM22Q9NW64 420 aaKnown RBP eCLIP2.71□□□□□ -1.98
PTCH1-216ENST00000548379 SLC2A8Q9NY64 477 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 CALYQ9NYX4 217 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 KCNIP1Q9NZI2 227 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 XCL2Q9UBD3 114 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 RPS6KB2Q9UBS0 482 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 N6AMT1Q9Y5N5 214 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 HEBP2Q9Y5Z4 205 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 PLXND1Q9Y4D7 1925 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 SCN1AP35498 2009 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 EML5Q05BV3 1969 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 TRIP11Q15643 1979 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 SDK1Q7Z5N4 2213 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 ASCC3Q8N3C0 2202 aaKnown RBP2.7□□□□□ -1.98
PTCH1-216ENST00000548379 PLXNB3Q9ULL4 1909 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 CITO14578 2027 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 RBMY1BA6NDE4 496 aaKnown RBP2.7□□□□□ -1.98
PTCH1-216ENST00000548379 RBMY1EA6NEQ0 496 aaKnown RBP2.7□□□□□ -1.98
PTCH1-216ENST00000548379 C12orf71A8MTZ7 269 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 C2orf74A8MZ97 194 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 H0Y9J4 135 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 CCL21O00585 134 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 CDH16O75309 829 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 POP7O75817 140 aaKnown RBP2.7□□□□□ -1.98
PTCH1-216ENST00000548379 OR2B3O76000 313 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 MOSP00540 346 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 RBMY1DP0C7P1 496 aaKnown RBP2.7□□□□□ -1.98
PTCH1-216ENST00000548379 RBMY1A1P0DJD3 496 aaKnown RBP2.7□□□□□ -1.98
PTCH1-216ENST00000548379 RALBP11234 206 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 MIPP30301 263 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 FMO3P31513 532 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 PCK1P35558 622 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 FBXW4P57775 412 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 ARG2P78540 354 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 PIGHQ14442 188 aaPredicted RBP2.7□□□□□ -1.98
PTCH1-216ENST00000548379 XKR7Q5GH72 579 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 VAX1Q5SQQ9 334 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 RAET1LQ5VY80 246 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 RNASEKQ6P5S7 137 aaKnown RBP2.7□□□□□ -1.98
PTCH1-216ENST00000548379 C16orf87Q6PH81 154 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 XKRXQ6PP77 449 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 ZNF321PQ8N8H1 164 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 OR4E2Q8NGC2 313 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 TSEN15Q8WW01 171 aaKnown RBP2.7□□□□□ -1.98
PTCH1-216ENST00000548379 LCN9Q8WX39 176 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 LRRC45Q96CN5 670 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 LRRC58Q96CX6 371 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 DCUN1D1Q96GG9 259 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 CSPG4P5Q96PW8 444 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 OR8B4Q96RC9 309 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 SH3GL1Q99961 368 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 RASL11BQ9BPW5 248 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 KIR3DX1Q9H7L2 352 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 EML4Q9HC35 981 aaKnown RBP2.7□□□□□ -1.98
PTCH1-216ENST00000548379 MRM3Q9HC36 420 aaKnown RBP2.7□□□□□ -1.98
PTCH1-216ENST00000548379 CHMP5Q9NZZ3 219 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 SLC23A2Q9UGH3 650 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 NXT1Q9UKK6 140 aaKnown RBP2.7□□□□□ -1.98
PTCH1-216ENST00000548379 PSMD13Q9UNM6 376 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 BTRCQ9Y297 605 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms