RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 UFSP2Q9NUQ7 469 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 CLN6Q9NWW5 311 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 USE1Q9NZ43 259 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 ZNF816-ZNF321PA0A0X1KG74 233 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 hCG_1807616A0A1W2PRN6 198 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 C5orf63A6NC05 138 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 SAC3D1A6NKF1 404 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 SNTNA6NMZ2 147 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 MTRF1O75570 445 aaKnown RBP9.89□□□□□ -0.83
HDAC4-216ENST00000544989 GRPP07492 148 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 MRPL3P09001 348 aaKnown RBP9.89□□□□□ -0.83
HDAC4-216ENST00000544989 ZNF12P17014 697 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 FPR2P25090 351 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 ZFP36P26651 326 aaKnown RBP9.89□□□□□ -0.83
HDAC4-216ENST00000544989 EPHA2P29317 976 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 HTR1FP30939 366 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 CFHR2P36980 270 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 PITPNBP48739 271 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 ALDH3A2P51648 485 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 MPPED2Q15777 294 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 CD276Q5ZPR3 534 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 ZNF322Q6U7Q0 402 aaPredicted RBP9.89□□□□□ -0.83
HDAC4-216ENST00000544989 ZNF771Q7L3S4 317 aaPredicted RBP9.89□□□□□ -0.83
HDAC4-216ENST00000544989 KRT74Q7RTS7 529 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 SLC35F2Q8IXU6 374 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 OR8B12Q8NGG6 310 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 ZFAND2BQ8WV99 257 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 IL4I1Q96RQ9 567 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 MYCBPQ99417 103 aaPredicted RBP9.89□□□□□ -0.83
HDAC4-216ENST00000544989 SUCNR1Q9BXA5 334 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 C1orf123Q9NWV4 160 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 FAM206AQ9NX38 181 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 IMPAD1Q9NX62 359 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 ERVK-18Q9QC07 812 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 CLN8Q9UBY8 286 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 NUFIP1Q9UHK0 495 aaKnown RBP9.89□□□□□ -0.83
HDAC4-216ENST00000544989 IKZF2Q9UKS7 526 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 KLHDC2Q9Y2U9 406 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 INSIG2Q9Y5U4 225 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 AUP1Q9Y679 476 aa9.89□□□□□ -0.83
HDAC4-216ENST00000544989 IGHV3-64DA0A0J9YX35 117 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 OOEPA6NGQ2 149 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 ALPLP05186 524 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 OR2T7P0C7T2 308 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 MUC1P15941 1255 aaPredicted RBP9.88□□□□□ -0.83
HDAC4-216ENST00000544989 EPHA1P21709 976 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 ATP6V1E1P36543 226 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 CXCR4P61073 352 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 RIPPLY1Q0D2K3 151 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 ZNF154Q13106 437 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 MICBQ29980 383 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 ARMCX4Q5H9R4 360 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 MEDAGQ5VYS4 303 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 THAP5Q7Z6K1 395 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 COMMD2Q86X83 199 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 ZDHHC23Q8IYP9 409 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 SEMA6DQ8NFY4 1073 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 OR1M1Q8NGA1 313 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 OR10Z1Q8NGY1 313 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 OR2T27Q8NH04 317 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 C12orf43Q96C57 262 aaKnown RBP9.88□□□□□ -0.83
HDAC4-216ENST00000544989 PKP2Q99959 881 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 C9orf16Q9BUW7 83 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 PBOV1Q9GZY1 135 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 TLNRD1Q9H1K6 362 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 OCEL1Q9H607 264 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 ADGRL4Q9HBW9 690 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 ZNF319Q9P2F9 582 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.88□□□□□ -0.83
HDAC4-216ENST00000544989 RHBDD3Q9Y3P4 386 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 SNX5Q9Y5X3 404 aa9.88□□□□□ -0.83
HDAC4-216ENST00000544989 LOC105371242A0A075B767 164 aa9.87□□□□□ -0.83
HDAC4-216ENST00000544989 DHRS7CA6NNS2 312 aa9.87□□□□□ -0.83
HDAC4-216ENST00000544989 LOC110117498-PIK3R3F6TDL0 507 aa9.87□□□□□ -0.83
HDAC4-216ENST00000544989 SULT1C4O75897 302 aa9.87□□□□□ -0.83
HDAC4-216ENST00000544989 ZNF205O95201 554 aa9.87□□□□□ -0.83
HDAC4-216ENST00000544989 LHBP01229 141 aa9.87□□□□□ -0.83
HDAC4-216ENST00000544989 KRT8P05787 483 aa9.87□□□□□ -0.83
HDAC4-216ENST00000544989 LIPFP07098 398 aa9.87□□□□□ -0.83
HDAC4-216ENST00000544989 ADRA2CP18825 462 aa9.87□□□□□ -0.83
HDAC4-216ENST00000544989 ANOS1P23352 680 aa9.87□□□□□ -0.83
HDAC4-216ENST00000544989 PSMB10P40306 273 aa9.87□□□□□ -0.83
HDAC4-216ENST00000544989 HCCSP53701 268 aa9.87□□□□□ -0.83
HDAC4-216ENST00000544989 FAM76BQ5HYJ3 339 aa9.87□□□□□ -0.83
HDAC4-216ENST00000544989 SLC25A30Q5SVS4 291 aa9.87□□□□□ -0.83
HDAC4-216ENST00000544989 BCL2L15Q5TBC7 163 aa9.87□□□□□ -0.83
HDAC4-216ENST00000544989 TEX36Q5VZQ5 186 aa9.87□□□□□ -0.83
HDAC4-216ENST00000544989 BPIFB2Q8N4F0 458 aa9.87□□□□□ -0.83
HDAC4-216ENST00000544989 CCDC54Q8NEL0 328 aa9.87□□□□□ -0.83
HDAC4-216ENST00000544989 DEFB108BQ8NET1 73 aa9.87□□□□□ -0.83
HDAC4-216ENST00000544989 OR51G2Q8NGK0 314 aa9.87□□□□□ -0.83
HDAC4-216ENST00000544989 RAB40AQ8WXH6 277 aa9.87□□□□□ -0.83
HDAC4-216ENST00000544989 OR5P3Q8WZ94 311 aa9.87□□□□□ -0.83
HDAC4-216ENST00000544989 DVL3Q92997 716 aaPredicted RBP9.87□□□□□ -0.83
HDAC4-216ENST00000544989 ITPKCQ96DU7 683 aa9.87□□□□□ -0.83
HDAC4-216ENST00000544989 MRPL48Q96GC5 212 aaKnown RBP9.87□□□□□ -0.83
HDAC4-216ENST00000544989 HRASLS5Q96KN8 279 aa9.87□□□□□ -0.83
HDAC4-216ENST00000544989 ENPP5Q9UJA9 477 aa9.87□□□□□ -0.83
HDAC4-216ENST00000544989 COPS3Q9UNS2 423 aa9.87□□□□□ -0.83
HDAC4-216ENST00000544989 R4GMQ9 66 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms