RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 RANBP3LQ86VV4 465 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-220ENST00000544550 C19orf18Q8NEA5 215 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 SPATA4Q8NEY3 305 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 BBS10Q8TAM1 723 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 ACOT11Q8WXI4 607 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-220ENST00000544550 TNFRSF14Q92956 283 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 MYDGFQ969H8 173 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 TEX37Q96LM6 180 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 ZIM3Q96PE6 472 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 OR5M11Q96RB7 305 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 ZNF649Q9BS31 505 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 ELOVL1Q9BW60 279 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 HCAR1Q9BXC0 346 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 RMND5AQ9H871 391 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 MEAF6Q9HAF1 191 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 PLEKHA2Q9HB19 425 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 TAS2R5Q9NYW4 299 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 SLC13A4Q9UKG4 626 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 BAG5Q9UL15 447 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 PRPF19Q9UMS4 504 aaKnown RBP3.27□□□□□ -1.89
SNHG1-220ENST00000544550 TCF19Q9Y242 345 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 STARD10Q9Y365 291 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 TENM2Q9NT68 2774 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 HERC2O95714 4834 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 IGHV3-64DA0A0J9YX35 117 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 NPIPB13A6NJU9 1138 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 C5orf58C9J3I9 102 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 NPIPB4C9JG80 1138 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 E9PBE3 544 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 H0YAE9 185 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 BLOC1S5-TXNDC5H3BN57 136 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 CLIC1O00299 241 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 HDAC3O15379 428 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 PLIN3O60664 434 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 SLC2A10O95528 541 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 SERPINE1P05121 402 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 HNRNPCP07910 306 aaKnown RBP eCLIP3.26□□□□□ -1.89
SNHG1-220ENST00000544550 UMPSP11172 480 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 ETS2P15036 469 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 MUC1P15941 1255 aaPredicted RBP3.26□□□□□ -1.89
SNHG1-220ENST00000544550 MSR1P21757 451 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 AZGP1P25311 298 aaKnown RBP3.26□□□□□ -1.89
SNHG1-220ENST00000544550 HTR2AP28223 471 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 S100A3P33764 101 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 SERPINB5P36952 375 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 MYCNOSP40205 109 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 THBS3P49746 956 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 ERFP50548 548 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 DSTNP60981 165 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 VAMP2P63027 116 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 HOXA4Q00056 320 aaPredicted RBP3.26□□□□□ -1.89
SNHG1-220ENST00000544550 IL5RAQ01344 420 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 CD47Q08722 323 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 KLRD1Q13241 179 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 MAB21L1Q13394 359 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 OR1Q1Q15612 314 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 MAPK11Q15759 364 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 ZNF74Q16587 644 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 BEND6Q5SZJ8 279 aaPredicted RBP3.26□□□□□ -1.89
SNHG1-220ENST00000544550 PRAMEF6Q5VXH4 476 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 TEX36Q5VZQ5 186 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 C1orf94Q6P1W5 598 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 TTC33Q6PID6 262 aaPredicted RBP3.26□□□□□ -1.89
SNHG1-220ENST00000544550 COLCA1Q6ZS62 124 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 ZNF621Q6ZSS3 439 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 NANOGNBQ7Z5D8 188 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 SBSPONQ8IVN8 264 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 Q8N7P7 452 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 BOLLQ8N9W6 283 aaKnown RBP3.26□□□□□ -1.89
SNHG1-220ENST00000544550 BHLHE23Q8NDY6 225 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 OR52H1Q8NGJ2 320 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 RPS4Y2Q8TD47 263 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 GATAD1Q8WUU5 269 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 SLC38A5Q8WUX1 472 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 RORBQ92753 470 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 APOBEC3DQ96AK3 386 aaPredicted RBP3.26□□□□□ -1.89
SNHG1-220ENST00000544550 C12orf43Q96C57 262 aaKnown RBP3.26□□□□□ -1.89
SNHG1-220ENST00000544550 DAZAP1Q96EP5 407 aaKnown RBP3.26□□□□□ -1.89
SNHG1-220ENST00000544550 TMEM19Q96HH6 336 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 AKR1E2Q96JD6 320 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 RBP7Q96R05 134 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 ALG12Q9BV10 488 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 HEXA-AS1Q9H8Q6 139 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 BCL2L10Q9HD36 194 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 UFSP2Q9NUQ7 469 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 GIMAP2Q9UG22 337 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 ATPIF1Q9UII2 106 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 EMCNQ9ULC0 261 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 UGT2A1Q9Y4X1 527 aa3.26□□□□□ -1.89
SNHG1-220ENST00000544550 LYSTQ99698 3801 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 COL7A1Q02388 2944 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 hCG_1809904A0A1W2PP81 198 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 A0A1W2PPE2 198 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 A0A1W2PPH5 198 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 A0A1W2PQ09 198 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 A0A1W2PR64 198 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 hCG_1807616A0A1W2PRN6 198 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 A0A1W2PRV1 198 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 A6NDX4 124 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 PRORSD1PA6NEY8 169 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms