RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 BDH1Q02338 343 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 TBCEQ15813 527 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 KCTD21Q4G0X4 260 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 FAM209AQ5JX71 171 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 DMKNQ6E0U4 476 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 OR13C3Q8NGS6 347 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 OR8S1Q8NH09 359 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 TSEN15Q8WW01 171 aaKnown RBP12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 DVL3Q92997 716 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 SMIM19Q96E16 107 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 EGLN1Q9GZT9 426 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 SAP30LQ9HAJ7 183 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 BARX1Q9HBU1 254 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 NKIRAS2Q9NYR9 191 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ITGB1BP2Q9UKP3 347 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 APCP25054 2843 aa12.31□□□□□ -0.44
TNFRSF1A-216ENST00000543995 CHD3Q12873 2000 aaKnown RBP12.31□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ABCA12Q86UK0 2595 aa12.31□□□□□ -0.44
TNFRSF1A-216ENST00000543995 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF1A-216ENST00000543995 A6NIN4 97 aa12.31□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ANXA2P2A6NMY6 339 aa12.31□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ZNF850A8MQ14 1090 aa12.31□□□□□ -0.44
TNFRSF1A-216ENST00000543995 F5H5P2 479 aa12.31□□□□□ -0.44
TNFRSF1A-216ENST00000543995 SSX4O60224 188 aa12.31□□□□□ -0.44
TNFRSF1A-216ENST00000543995 GMDSO60547 372 aa12.31□□□□□ -0.44
TNFRSF1A-216ENST00000543995 LY6HO94772 140 aa12.31□□□□□ -0.44
TNFRSF1A-216ENST00000543995 F12P00748 615 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF1A-216ENST00000543995 IGHV4-39P01824 125 aa12.31□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ADH4P08319 380 aa12.31□□□□□ -0.44
TNFRSF1A-216ENST00000543995 EMX1Q04741 257 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ACSM1Q08AH1 577 aa12.31□□□□□ -0.44
TNFRSF1A-216ENST00000543995 PRDX4Q13162 271 aa12.31□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ZNF773Q6PK81 442 aa12.31□□□□□ -0.44
TNFRSF1A-216ENST00000543995 SPARTQ8N0X7 666 aa12.31□□□□□ -0.44
TNFRSF1A-216ENST00000543995 LRRC75A-AS1Q8N1F1 130 aa12.31□□□□□ -0.44
TNFRSF1A-216ENST00000543995 OR51A4Q8NGJ6 313 aa12.31□□□□□ -0.44
TNFRSF1A-216ENST00000543995 OR10AC1Q8NH08 325 aa12.31□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ACOT13Q9NPJ3 140 aa12.31□□□□□ -0.44
TNFRSF1A-216ENST00000543995 MPC1Q9Y5U8 109 aa12.31□□□□□ -0.44
TNFRSF1A-216ENST00000543995 SPG11Q96JI7 2443 aa12.3□□□□□ -0.44
TNFRSF1A-216ENST00000543995 DHRS7CA6NNS2 312 aa12.3□□□□□ -0.44
TNFRSF1A-216ENST00000543995 PLPP2O43688 288 aa12.3□□□□□ -0.44
TNFRSF1A-216ENST00000543995 LMX1BO60663 402 aa12.3□□□□□ -0.44
TNFRSF1A-216ENST00000543995 CST4P01036 141 aa12.3□□□□□ -0.44
TNFRSF1A-216ENST00000543995 HPXP02790 462 aa12.3□□□□□ -0.44
TNFRSF1A-216ENST00000543995 DAOP14920 347 aa12.3□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ZNF20P17024 532 aa12.3□□□□□ -0.44
TNFRSF1A-216ENST00000543995 SRP9P49458 86 aaKnown RBP12.3□□□□□ -0.44
TNFRSF1A-216ENST00000543995 DOC2BQ14184 412 aa12.3□□□□□ -0.44
TNFRSF1A-216ENST00000543995 TESK1Q15569 626 aa12.3□□□□□ -0.44
TNFRSF1A-216ENST00000543995 CEP78Q5JTW2 689 aa12.3□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ZBTB37Q5TC79 503 aa12.3□□□□□ -0.44
TNFRSF1A-216ENST00000543995 Q6ZSR3 168 aa12.3□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ZNF367Q7RTV3 350 aa12.3□□□□□ -0.44
TNFRSF1A-216ENST00000543995 RPS4Y2Q8TD47 263 aa12.3□□□□□ -0.44
TNFRSF1A-216ENST00000543995 GHSRQ92847 366 aa12.3□□□□□ -0.44
TNFRSF1A-216ENST00000543995 HIST1H2AAQ96QV6 131 aa12.3□□□□□ -0.44
TNFRSF1A-216ENST00000543995 OR2V2Q96R30 315 aa12.3□□□□□ -0.44
TNFRSF1A-216ENST00000543995 PPP1R3EQ9H7J1 279 aa12.3□□□□□ -0.44
TNFRSF1A-216ENST00000543995 IL19Q9UHD0 177 aa12.3□□□□□ -0.44
TNFRSF1A-216ENST00000543995 DHDHQ9UQ10 334 aa12.3□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ZNF281Q9Y2X9 895 aa12.3□□□□□ -0.44
TNFRSF1A-216ENST00000543995 CSMD2Q7Z408 3487 aa12.29□□□□□ -0.44
TNFRSF1A-216ENST00000543995 IGHV3-64DA0A0J9YX35 117 aa12.29□□□□□ -0.44
TNFRSF1A-216ENST00000543995 CDC14BO60729 498 aa12.29□□□□□ -0.44
TNFRSF1A-216ENST00000543995 NCR1O76036 304 aa12.29□□□□□ -0.44
TNFRSF1A-216ENST00000543995 NRASP01111 189 aa12.29□□□□□ -0.44
TNFRSF1A-216ENST00000543995 CD55P08174 381 aa12.29□□□□□ -0.44
TNFRSF1A-216ENST00000543995 TNFRSF1AP19438 455 aa12.29□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ART1P52961 327 aa12.29□□□□□ -0.44
TNFRSF1A-216ENST00000543995 MZT1Q08AG7 82 aa12.29□□□□□ -0.44
TNFRSF1A-216ENST00000543995 CARTPTQ16568 116 aa12.29□□□□□ -0.44
TNFRSF1A-216ENST00000543995 CLVS2Q5SYC1 327 aa12.29□□□□□ -0.44
TNFRSF1A-216ENST00000543995 PLCXD3Q63HM9 321 aa12.29□□□□□ -0.44
TNFRSF1A-216ENST00000543995 MOB3CQ70IA8 216 aa12.29□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ZDHHC23Q8IYP9 409 aa12.29□□□□□ -0.44
TNFRSF1A-216ENST00000543995 SPERTQ8NA61 448 aa12.29□□□□□ -0.44
TNFRSF1A-216ENST00000543995 GPR148Q8TDV2 347 aa12.29□□□□□ -0.44
TNFRSF1A-216ENST00000543995 UBASH3BQ8TF42 649 aa12.29□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ITLN1Q8WWA0 313 aa12.29□□□□□ -0.44
TNFRSF1A-216ENST00000543995 UFD1Q92890 307 aa12.29□□□□□ -0.44
TNFRSF1A-216ENST00000543995 C10orf35Q96D05 121 aa12.29□□□□□ -0.44
TNFRSF1A-216ENST00000543995 MGLLQ99685 303 aa12.29□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ABCB9Q9NP78 766 aa12.29□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ANKRD17O75179 2603 aaKnown RBP12.29□□□□□ -0.44
TNFRSF1A-216ENST00000543995 A0A1B0GWJ7 208 aa12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ANKRD61A6NGH8 418 aa12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 TRIM64A6NGJ6 449 aa12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 CYSRT1A8MQ03 144 aa12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 SERPINA3P01011 423 aa12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 OCM2P0CE71 109 aa12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 SOX2P48431 317 aa12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 MLLT11Q13015 90 aaPredicted RBP12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 SPRNQ5BIV9 151 aa12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 YIF1BQ5BJH7 314 aa12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 DMRTC1Q5HYR2 192 aa12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 LIPKQ5VXJ0 399 aa12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 KCTD8Q6ZWB6 473 aa12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 TSPAN14Q8NG11 270 aa12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 OR13C5Q8NGS8 318 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms