RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 DNAJC27Q9NZQ0 273 aa9.81□□□□□ -0.84
GABPB1-206ENST00000543881 ERVK-18Q9QC07 812 aa9.81□□□□□ -0.84
GABPB1-206ENST00000543881 PRPF19Q9UMS4 504 aaKnown RBP9.81□□□□□ -0.84
GABPB1-206ENST00000543881 RNF114Q9Y508 228 aa9.81□□□□□ -0.84
GABPB1-206ENST00000543881 IGHV3OR15-7A0A075B7D8 119 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 TRAV38-1A0A0B4J264 116 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 hCG_38984A0A1B0GV85 526 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 A0A1B0GW55 424 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 A6NLC8 198 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 H3BN98 237 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 GLCEO94923 617 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 TSPAN15O95858 294 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 FAM107AO95990 144 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 CST1P01037 141 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 ANXA2P07355 339 aaKnown RBP9.8□□□□□ -0.84
GABPB1-206ENST00000543881 DUX4L2P0CJ85 424 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 DUX4L3P0CJ86 424 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 DUX4L4P0CJ87 422 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 DUX4L5P0CJ88 424 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 DUX4L6P0CJ89 424 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 DUX4L7P0CJ90 424 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 CFHR2P36980 270 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 DDOSTP39656 456 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 OPRL1P41146 370 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 SLC15A1P46059 708 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 BLVRAP53004 296 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 ZNF121P58317 390 aaPredicted RBP9.8□□□□□ -0.84
GABPB1-206ENST00000543881 CSNK2BP67870 215 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 PDCD1Q15116 288 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 KCNJ8Q15842 424 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 TEX36Q5VZQ5 186 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 DUX4L9Q6RFH8 374 aaPredicted RBP9.8□□□□□ -0.84
GABPB1-206ENST00000543881 Q6YL49 198 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 FAM57BQ71RH2 274 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 HS3ST5Q8IZT8 346 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 TEX47Q8TBZ9 253 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 GIPC3Q8TF64 312 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 CANT1Q8WVQ1 401 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 OTULINQ96BN8 352 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 OR51V1Q9H2C8 321 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 TOR3AQ9H497 397 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 NOX4Q9NPH5 578 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 DUX4Q9UBX2 424 aa9.8□□□□□ -0.84
GABPB1-206ENST00000543881 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.79□□□□□ -0.84
GABPB1-206ENST00000543881 hCG_1807616A0A1W2PRN6 198 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 ARRDC5A6NEK1 342 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 ANKRD30BLA7E2S9 258 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 ZNF879B4DU55 563 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.79□□□□□ -0.84
GABPB1-206ENST00000543881 CALRP27797 417 aaKnown RBP9.79□□□□□ -0.84
GABPB1-206ENST00000543881 HSD11B1P28845 292 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 GSK3AP49840 483 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 GINS1Q14691 196 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 TIGD6Q17RP2 521 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 CD276Q5ZPR3 534 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 CCDC197Q8NCU1 140 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 OR1M1Q8NGA1 313 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 OR8S1Q8NH09 359 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 FAM110DQ8TAY7 271 aaPredicted RBP9.79□□□□□ -0.84
GABPB1-206ENST00000543881 SEH1LQ96EE3 360 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 LRGUKQ96M69 825 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 THTPAQ9BU02 230 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 SIRPDQ9H106 197 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 BRD7Q9NPI1 651 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 C14orf119Q9NWQ9 140 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 KLHDC2Q9Y2U9 406 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 RHBDD3Q9Y3P4 386 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 CENPVL3A0A0U1RRI6 287 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 P2RY10O00398 339 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 DVL1O14640 695 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 NDUFA2O43678 99 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 SELENOFO60613 162 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 CLPXO76031 633 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 TOX4O94842 621 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 LIPFP07098 398 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 MELTFP08582 738 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 AMY2BP19961 511 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 PRKACGP22612 351 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 POU1F1P28069 291 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 MZT1Q08AG7 82 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 GK3PQ14409 553 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 GFOD2Q3B7J2 385 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 GPR157Q5UAW9 335 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 PLBD1Q6P4A8 553 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 WDR82Q6UXN9 313 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 BTN2A1Q7KYR7 527 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 TMEM86BQ8N661 226 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 LINC01006Q8NI28 216 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 LRRC29Q8WV35 223 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 WDFY2Q96P53 400 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 FGF23Q9GZV9 251 aaPredicted RBP9.79□□□□□ -0.84
GABPB1-206ENST00000543881 C1orf21Q9H246 121 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 RNPEPL1Q9HAU8 725 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 TCF7L1Q9HCS4 588 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 TRIM36Q9NQ86 728 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.79□□□□□ -0.84
GABPB1-206ENST00000543881 KAAG1Q9UBP8 84 aa9.79□□□□□ -0.84
GABPB1-206ENST00000543881 APOC1P02654 83 aa9.78□□□□□ -0.84
GABPB1-206ENST00000543881 H2BFMP0C1H6 154 aa9.78□□□□□ -0.84
GABPB1-206ENST00000543881 ACKR3P25106 362 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms