RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 MBD3L2Q8NHZ7 208 aaPredicted RBP8.13□□□□□ -1.11
GNE-206ENST00000543356 NANOS1Q8WY41 292 aaKnown RBP8.13□□□□□ -1.11
GNE-206ENST00000543356 BCL2L2Q92843 193 aaPredicted RBP8.13□□□□□ -1.11
GNE-206ENST00000543356 EXTL1Q92935 676 aa8.13□□□□□ -1.11
GNE-206ENST00000543356 SOX7Q9BT81 388 aa8.13□□□□□ -1.11
GNE-206ENST00000543356 BCL2L14Q9BZR8 327 aa8.13□□□□□ -1.11
GNE-206ENST00000543356 RGCCQ9H4X1 137 aa8.13□□□□□ -1.11
GNE-206ENST00000543356 PLEKHA1Q9HB21 404 aa8.13□□□□□ -1.11
GNE-206ENST00000543356 TMEM138Q9NPI0 162 aa8.13□□□□□ -1.11
GNE-206ENST00000543356 TBC1D24Q9ULP9 559 aa8.13□□□□□ -1.11
GNE-206ENST00000543356 RHBDD3Q9Y3P4 386 aa8.13□□□□□ -1.11
GNE-206ENST00000543356 LOC100289279A0A1B0GTE1 492 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 HMX3A6NHT5 357 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 ST8SIA5O15466 376 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 SULT1B1O43704 296 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 WDR1O75083 606 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 HTR2CP28335 458 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 MNDAP41218 407 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 ART1P52961 327 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 SNRPD2P62316 118 aaKnown RBP8.12□□□□□ -1.11
GNE-206ENST00000543356 S100A12P80511 92 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 SPOCK1Q08629 439 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 GFOD2Q3B7J2 385 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 ZNF585AQ6P3V2 769 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 CPEB3Q8NE35 698 aaKnown RBP8.12□□□□□ -1.11
GNE-206ENST00000543356 SGK3Q96BR1 496 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 SORCS2Q96PQ0 1159 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 C1QTNF5Q9BXJ0 243 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 METTL17Q9H7H0 456 aaPredicted RBP8.12□□□□□ -1.11
GNE-206ENST00000543356 CTDSPLO15194 276 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 HLA-HP01893 362 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 ALDOBP05062 364 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 ADRB1P08588 477 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 KIR2DL2P43627 348 aaPredicted RBP8.12□□□□□ -1.11
GNE-206ENST00000543356 ASAH1Q13510 395 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 TRIQKQ629K1 86 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 Q6ZT83 130 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 GCNT2Q8N0V5 402 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 OR13C9Q8NGT0 318 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 SYNPRQ8TBG9 265 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 ZFAND1Q8TCF1 268 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 DEDD2Q8WXF8 326 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 PP6455Q8WZ26 134 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 FAM3DQ96BQ1 224 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 HAVCR1Q96D42 359 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 BOD1Q96IK1 185 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 C12orf57Q99622 126 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 TINAGL1Q9GZM7 467 aaPredicted RBP8.12□□□□□ -1.11
GNE-206ENST00000543356 NOX3Q9HBY0 568 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 RAXQ9Y2V3 346 aa8.12□□□□□ -1.11
GNE-206ENST00000543356 ZNF503-AS2A6NEH8 195 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 LCATP04180 440 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 CRHP06850 196 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 ABOP16442 354 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 POU3F4P49335 361 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 MADCAM1Q13477 382 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 EIF2S3LQ2VIR3 472 aaKnown RBP8.11□□□□□ -1.11
GNE-206ENST00000543356 GLYATL3Q5SZD4 288 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 C1orf185Q5T7R7 199 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 HACD4Q5VWC8 232 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 COLCA1Q6ZS62 124 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 OR5AS1Q8N127 324 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 Q8NA96 180 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 S100A16Q96FQ6 103 aaKnown RBP8.11□□□□□ -1.11
GNE-206ENST00000543356 REEP6Q96HR9 211 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 NEDD4LQ96PU5 975 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 IFT46Q9NQC8 304 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 B3GNT2Q9NY97 397 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 CGGBP1Q9UFW8 167 aaPredicted RBP8.11□□□□□ -1.11
GNE-206ENST00000543356 FRYQ5TBA9 3013 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 DNAJC13O75165 2243 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 CACNA1CQ13936 2221 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 FIGNL2A6NMB9 653 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 XRCC2O43543 280 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 GSTZ1O43708 216 aaPredicted RBP8.11□□□□□ -1.11
GNE-206ENST00000543356 CD79AP11912 226 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 COX5AP20674 150 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 IGHV1-2P23083 117 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 MMP15P51511 669 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 TDGF1P3P51864 188 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 RAB1AP62820 205 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 TGFBR3Q03167 851 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 BTN1A1Q13410 526 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 HIKESHIQ53FT3 197 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 JAGN1Q8N5M9 183 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 CNEP1R1Q8N9A8 125 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 C1orf162Q8NEQ5 155 aaPredicted RBP8.11□□□□□ -1.11
GNE-206ENST00000543356 OR51D1Q8NGF3 324 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 OR52N4Q8NGI2 321 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 FAM57AQ8TBR7 257 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 AKAP1Q92667 903 aaKnown RBP eCLIP8.11□□□□□ -1.11
GNE-206ENST00000543356 SPSB4Q96A44 273 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 PTX4Q96A99 478 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 ABHD1Q96SE0 405 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 CHST5Q9GZS9 411 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 SAV1Q9H4B6 383 aaPredicted RBP8.11□□□□□ -1.11
GNE-206ENST00000543356 PLSCR4Q9NRQ2 329 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 LUZP4Q9P127 313 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 TUBD1Q9UJT1 453 aa8.11□□□□□ -1.11
GNE-206ENST00000543356 AUP1Q9Y679 476 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms