RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 IFNL4K9M1U5 179 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 IGHV1-46P01743 117 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 CSF3P09919 207 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 NAT2P11245 290 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 ANOS1P23352 680 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 CDKN1AP38936 164 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 PTH2RP49190 550 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 SRP9P49458 86 aaKnown RBP10.37□□□□□ -0.75
DDX55-210ENST00000543016 GTF2A1P52655 376 aaPredicted RBP10.37□□□□□ -0.75
DDX55-210ENST00000543016 ATP5J2P56134 94 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 DSCR9P59020 149 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 MLLT11Q13015 90 aaPredicted RBP10.37□□□□□ -0.75
DDX55-210ENST00000543016 YIF1BQ5BJH7 314 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 TMEM255AQ5JRV8 349 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 SPARTQ8N0X7 666 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 OR5AS1Q8N127 324 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 MS4A15Q8N5U1 240 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 GPR148Q8TDV2 347 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 PP6455Q8WZ26 134 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 SGCDQ92629 289 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 ERGIC1Q969X5 290 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 ELMOD3Q96FG2 381 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 HIST1H2AAQ96QV6 131 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 ZNF696Q9H7X3 374 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 PLEKHA1Q9HB21 404 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 NEK6Q9HC98 313 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 MSL2Q9HCI7 577 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 ACOT13Q9NPJ3 140 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 C14orf119Q9NWQ9 140 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 PIGLQ9Y2B2 252 aa10.37□□□□□ -0.75
DDX55-210ENST00000543016 POLQO75417 2590 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 CELSR2Q9HCU4 2923 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 ANKRD17O75179 2603 aaKnown RBP10.36□□□□□ -0.75
DDX55-210ENST00000543016 A0A087WXM4 84 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 SPRY3O43610 288 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 GATBO75879 557 aaKnown RBP10.36□□□□□ -0.75
DDX55-210ENST00000543016 CD2P06729 351 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 CELP19835 753 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 CA6P23280 308 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 ACKR3P25106 362 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 PSMA1P25786 263 aaKnown RBP10.36□□□□□ -0.75
DDX55-210ENST00000543016 CD200P41217 278 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 TNFAIP6P98066 277 aaPredicted RBP10.36□□□□□ -0.75
DDX55-210ENST00000543016 EMX1Q04741 257 aaPredicted RBP10.36□□□□□ -0.75
DDX55-210ENST00000543016 TNK1Q13470 666 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 TPBGQ13641 420 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 OR8G1Q15617 311 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 TRAM1Q15629 374 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 CLVS2Q5SYC1 327 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 SHEQ5VZ18 495 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 TMEM42Q69YG0 159 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 Q6ZR03 302 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 BHLHE23Q8NDY6 225 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 OR2Z1Q8NG97 314 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 GHSRQ92847 366 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 UFD1Q92890 307 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 OR5M11Q96RB7 305 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 MGLLQ99685 303 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 MICU1Q9BPX6 476 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 PAPOLGQ9BWT3 736 aaKnown RBP10.36□□□□□ -0.75
DDX55-210ENST00000543016 CXXC4Q9H2H0 198 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 VCX3AQ9NNX9 186 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 DLL4Q9NR61 685 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 ZNF275Q9NSD4 429 aaPredicted RBP10.36□□□□□ -0.75
DDX55-210ENST00000543016 RHBDD3Q9Y3P4 386 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 APCP25054 2843 aa10.36□□□□□ -0.75
DDX55-210ENST00000543016 ITPR2Q14571 2701 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 NBPF19A0A087WUL8 3843 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 OR5B21A6NL26 309 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 TMEM210A6NLX4 147 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 TPD52L2O43399 206 aaKnown RBP10.35□□□□□ -0.75
DDX55-210ENST00000543016 ALX3O95076 343 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 PTBP3O95758 552 aaKnown RBP10.35□□□□□ -0.75
DDX55-210ENST00000543016 LALBAP00709 142 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 NRASP01111 189 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 GATA4P43694 442 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 SLC3A1Q07837 685 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 ODF4Q2M2E3 257 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 UBE2UQ5VVX9 321 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 CRYBG3Q68DQ2 2970 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 XAF1Q6GPH4 301 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 UTS2BQ765I0 119 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 ZDHHC23Q8IYP9 409 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 RDH10Q8IZV5 341 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 TSPAN14Q8NG11 270 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 OR5A2Q8NGI9 324 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 OR13C3Q8NGS6 347 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 OR8S1Q8NH09 359 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 UBASH3BQ8TF42 649 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 PIGCQ92535 297 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 RDH5Q92781 318 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 SORCS2Q96PQ0 1159 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 PDCD1LG2Q9BQ51 273 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 ADAT1Q9BUB4 502 aaKnown RBP10.35□□□□□ -0.75
DDX55-210ENST00000543016 RTL8AQ9BWD3 113 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 CHST5Q9GZS9 411 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 SAP30LQ9HAJ7 183 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 DHDHQ9UQ10 334 aa10.35□□□□□ -0.75
DDX55-210ENST00000543016 SIRT4Q9Y6E7 314 aaPredicted RBP10.35□□□□□ -0.75
DDX55-210ENST00000543016 HRNRQ86YZ3 2850 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms