RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 IGHV7-81A0A0B4J1V7 117 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 ZNF816-ZNF321PA0A0X1KG74 233 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 A0A1B0GU03 582 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 EFCAB10A6NFE3 127 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 CCDC160A6NGH7 325 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 FAM25AB3EWG3 89 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 FAM25CB3EWG5 89 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 FAM25GB3EWG6 89 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 H3BSA7 217 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 CCRL2O00421 344 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 GYG2O15488 501 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 DENRO43583 198 aaKnown RBP3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 FKBP6O75344 327 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 PSIP1O75475 530 aaKnown RBP3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 DUSP14O95147 198 aaKnown RBP3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 VAPBO95292 243 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 TTC4O95801 387 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 CFC1BP0CG36 223 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 CFC1P0CG37 223 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 PGAM2P15259 253 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 ZNF250P15622 560 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 NQO2P16083 231 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 IL12BP29460 328 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 COILP38432 576 aaPredicted RBP3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 GLP1RP43220 463 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 GPR6P46095 362 aaPredicted RBP3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 CCR8P51685 355 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 SUB1P53999 127 aaKnown RBP eCLIP3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 UCNP55089 124 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 CLDN6P56747 220 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 SELENOTP62341 195 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 ASAH1Q13510 395 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 RUNX3Q13761 415 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 GGTLC2Q14390 218 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 TMED2Q15363 201 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 SHHQ15465 462 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 ATP6AP1Q15904 470 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 LRRC26Q2I0M4 334 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 OR2B11Q5JQS5 317 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 ZNF613Q6PF04 617 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 UNQ9370/PRO34162Q6UXP9 181 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 C2orf66Q6UXQ4 117 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 TMPRSS11AQ6ZMR5 421 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 LINC00299Q6ZSB3 139 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 ZNF621Q6ZSS3 439 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 LINC00336Q6ZUF6 198 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 H2AFVQ71UI9 128 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 PRSS41Q7RTY9 318 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 OR2W3Q7Z3T1 314 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 TMEM135Q86UB9 458 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 LRRC6Q86X45 466 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 HIPK1Q86Z02 1210 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 SYS1Q8N2H4 156 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 C6orf223Q8N319 242 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 DNAAF3Q8N9W5 541 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 CCDC71LQ8N9Z2 235 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 ZNF740Q8NDX6 193 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 OR10G3Q8NGC4 313 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 OR51F2Q8NH61 342 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 ACER1Q8TDN7 264 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 TFGQ92734 400 aaPredicted RBP3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 TAMM41Q96BW9 452 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 FRMD8P1Q9BZ68 369 aaPredicted RBP3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 C20orf85Q9H1P6 137 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 OR51J1Q9H342 316 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 ANKHQ9HCJ1 492 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 FBXO6Q9NRD1 293 aaPredicted RBP3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 NKIRAS1Q9NYS0 192 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 CALYQ9NYX4 217 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 PCYOX1Q9UHG3 505 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 KLHL21Q9UJP4 597 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 POFUT2Q9Y2G5 429 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 STYXL1Q9Y6J8 313 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 TPRP12270 2363 aaKnown RBP3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 CFAP54Q96N23 3096 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 ZSWIM8A7E2V4 1837 aa3.03□□□□□ -1.93
SFSWAP-211ENST00000542813 GVINP1Q7Z2Y8 2422 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 COL4A1P02462 1669 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 NRCAMQ92823 1304 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 KIR2DL5BA0A0G2JN68 375 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 KIR2DL5BA0A0G2JPC4 375 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 ARGFXA6NJG6 315 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 F6UB75 175 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 EDIL3O43854 480 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 TBL1XO60907 577 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 NOS1APO75052 506 aaPredicted RBP3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 MPDU1O75352 247 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 MYO1DO94832 1006 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 TNFAIP8O95379 198 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 APOC1P02654 83 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 IL6P05231 212 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 CALB1P05937 261 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 CT45A6P0DMU7 189 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 CT45A5P0DMU8 189 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 CT45A7P0DMV0 189 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 PSMC3P17980 439 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 HTR2CP28335 458 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 RPA3P35244 121 aaPredicted RBP3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 BTDP43251 543 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms