RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 OR4C46A6NHA9 309 aa13.92□□□□□ -0.18
HMGA2-210ENST00000541363 DRGXA6NNA5 263 aa13.92□□□□□ -0.18
HMGA2-210ENST00000541363 M0QZQ0 153 aa13.92□□□□□ -0.18
HMGA2-210ENST00000541363 M0R082 166 aa13.92□□□□□ -0.18
HMGA2-210ENST00000541363 ZNF737O75373 536 aa13.92□□□□□ -0.18
HMGA2-210ENST00000541363 DGCR2P98153 550 aa13.92□□□□□ -0.18
HMGA2-210ENST00000541363 GAMTQ14353 236 aa13.92□□□□□ -0.18
HMGA2-210ENST00000541363 ZC3H3Q8IXZ2 948 aaKnown RBP13.92□□□□□ -0.18
HMGA2-210ENST00000541363 OR10A7Q8NGE5 316 aa13.92□□□□□ -0.18
HMGA2-210ENST00000541363 OR52L2PQ8NGH6 319 aa13.92□□□□□ -0.18
HMGA2-210ENST00000541363 ZNF346Q9UL40 294 aaKnown RBP13.92□□□□□ -0.18
HMGA2-210ENST00000541363 NUMBLQ9Y6R0 609 aa13.92□□□□□ -0.18
HMGA2-210ENST00000541363 PDE4DIPQ5VU43 2346 aa13.92□□□□□ -0.18
HMGA2-210ENST00000541363 CST5P28325 142 aaPredicted RBP13.92□□□□□ -0.18
HMGA2-210ENST00000541363 LIPNQ5VXI9 398 aa13.92□□□□□ -0.18
HMGA2-210ENST00000541363 SLC48A1Q6P1K1 146 aa13.92□□□□□ -0.18
HMGA2-210ENST00000541363 POM121Q96HA1 1249 aa13.92□□□□□ -0.18
HMGA2-210ENST00000541363 S1PR5Q9H228 398 aa13.92□□□□□ -0.18
HMGA2-210ENST00000541363 UQCC1Q9NVA1 299 aa13.92□□□□□ -0.18
HMGA2-210ENST00000541363 TCTN1Q2MV58 587 aa13.92□□□□□ -0.18
HMGA2-210ENST00000541363 MS4A8Q9BY19 250 aa13.92□□□□□ -0.18
HMGA2-210ENST00000541363 TXNRD2Q9NNW7 524 aa13.92□□□□□ -0.18
HMGA2-210ENST00000541363 TMEM238LA0A1B0GVL6 79 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 A6NJY4 79 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 RHBDL1O75783 438 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 FNDC7Q5VTL7 733 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 OR2A2Q6IF42 318 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.91□□□□□ -0.18
HMGA2-210ENST00000541363 TEAD3Q99594 435 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 HSD17B10Q99714 261 aaKnown RBP13.91□□□□□ -0.18
HMGA2-210ENST00000541363 TMEM9BQ9NQ34 198 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 FGF21Q9NSA1 209 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 USP3Q9Y6I4 520 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 BTLAQ7Z6A9 289 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 SIRT6Q8N6T7 355 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 OR6S1Q8NH40 331 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 ZIC5Q96T25 663 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 MYOZ1Q9NP98 299 aaPredicted RBP13.91□□□□□ -0.18
HMGA2-210ENST00000541363 ANXA10Q9UJ72 324 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 CTSLP07711 333 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 BPIFA4PQ86YQ2 179 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 FAM131CQ96AQ9 280 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 SPNS1Q9H2V7 528 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 UBE2L6O14933 153 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 CLDN20P56880 219 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 RIGQ13278 110 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 ELAVL1Q15717 326 aaKnown RBP13.91□□□□□ -0.18
HMGA2-210ENST00000541363 PLA1AQ53H76 456 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 SLC36A1Q7Z2H8 476 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 SARAFQ96BY9 339 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 PBOV1Q9GZY1 135 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 SLC22A20A6NK97 555 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 MGPP08493 103 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 COX6CP09669 75 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 CAMPP49913 170 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 TP53INP2Q8IXH6 220 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 PIGAP37287 484 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 TTC9BQ8N6N2 239 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 RPEQ96AT9 228 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 OXGR1Q96P68 337 aa13.91□□□□□ -0.18
HMGA2-210ENST00000541363 PI3P19957 117 aa13.9□□□□□ -0.18
HMGA2-210ENST00000541363 CD82P27701 267 aa13.9□□□□□ -0.18
HMGA2-210ENST00000541363 ARRB2P32121 409 aa13.9□□□□□ -0.18
HMGA2-210ENST00000541363 CSNK1EP49674 416 aaKnown RBP13.9□□□□□ -0.18
HMGA2-210ENST00000541363 FUT6P51993 359 aa13.9□□□□□ -0.18
HMGA2-210ENST00000541363 TCTAP57738 103 aa13.9□□□□□ -0.18
HMGA2-210ENST00000541363 CST9Q5W186 159 aa13.9□□□□□ -0.18
HMGA2-210ENST00000541363 ADAMTSL4Q6UY14 1074 aa13.9□□□□□ -0.18
HMGA2-210ENST00000541363 FGF13Q92913 245 aa13.9□□□□□ -0.18
HMGA2-210ENST00000541363 OR1B1Q8NGR6 318 aa13.9□□□□□ -0.18
HMGA2-210ENST00000541363 MARCH5Q9NX47 278 aa13.9□□□□□ -0.18
HMGA2-210ENST00000541363 NRG2O14511 850 aaPredicted RBP13.9□□□□□ -0.18
HMGA2-210ENST00000541363 HIST1H1CP16403 213 aaKnown RBP13.9□□□□□ -0.18
HMGA2-210ENST00000541363 SELENBP1Q13228 472 aa13.9□□□□□ -0.18
HMGA2-210ENST00000541363 PDPNQ86YL7 162 aa13.9□□□□□ -0.18
HMGA2-210ENST00000541363 LSMEM1Q8N8F7 131 aa13.9□□□□□ -0.18
HMGA2-210ENST00000541363 ATOH8Q96SQ7 321 aa13.9□□□□□ -0.18
HMGA2-210ENST00000541363 PCM1Q15154 2024 aa13.9□□□□□ -0.18
HMGA2-210ENST00000541363 SCN9AQ15858 1988 aa13.9□□□□□ -0.18
HMGA2-210ENST00000541363 INSM1Q01101 510 aaPredicted RBP13.9□□□□□ -0.18
HMGA2-210ENST00000541363 TMEM251Q8N6I4 163 aa13.9□□□□□ -0.18
HMGA2-210ENST00000541363 ISL2Q96A47 359 aa13.9□□□□□ -0.18
HMGA2-210ENST00000541363 T-ENOLP0DO92 83 aa13.9□□□□□ -0.18
HMGA2-210ENST00000541363 PRRX1P54821 245 aa13.9□□□□□ -0.18
HMGA2-210ENST00000541363 LIM2P55344 173 aa13.9□□□□□ -0.18
HMGA2-210ENST00000541363 ZNF426Q9BUY5 554 aa13.9□□□□□ -0.18
HMGA2-210ENST00000541363 C7orf72A4D263 438 aa13.89□□□□□ -0.19
HMGA2-210ENST00000541363 LMX1BO60663 402 aa13.89□□□□□ -0.19
HMGA2-210ENST00000541363 CSF2RBP32927 897 aa13.89□□□□□ -0.19
HMGA2-210ENST00000541363 SHBQ15464 509 aa13.89□□□□□ -0.19
HMGA2-210ENST00000541363 RPS19BP1Q86WX3 136 aaKnown RBP13.89□□□□□ -0.19
HMGA2-210ENST00000541363 IL17BQ9UHF5 180 aa13.89□□□□□ -0.19
HMGA2-210ENST00000541363 GNG10P50151 68 aa13.89□□□□□ -0.19
HMGA2-210ENST00000541363 IZUMO4Q1ZYL8 232 aa13.89□□□□□ -0.19
HMGA2-210ENST00000541363 ANAPC16Q96DE5 110 aa13.89□□□□□ -0.19
HMGA2-210ENST00000541363 SH2D2AQ9NP31 389 aa13.89□□□□□ -0.19
HMGA2-210ENST00000541363 UBE2MP61081 183 aaKnown RBP13.89□□□□□ -0.19
HMGA2-210ENST00000541363 FLVCR2Q9UPI3 526 aa13.89□□□□□ -0.19
HMGA2-210ENST00000541363 TRGV8A0A0C4DH27 118 aa13.89□□□□□ -0.19
HMGA2-210ENST00000541363 H3BP45 60 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms