RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 LOC100289279A0A1B0GTE1 492 aa12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 SHISA8B8ZZ34 492 aa12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 H3BML4 177 aa12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 NKX2-8O15522 239 aa12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 SNAPINO95295 136 aa12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 DDAH2O95865 285 aa12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 H2AFB1P0C5Y9 115 aa12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 SELLP14151 372 aa12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 ABCD3P28288 659 aa12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 SLC37A1P57057 533 aa12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 AIMP2Q13155 320 aaKnown RBP12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 DHRS7BQ6IAN0 325 aaPredicted RBP12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 C11orf87Q6NUJ2 197 aa12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 FIP1L1Q6UN15 594 aaKnown RBP12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 ANKRD37Q7Z713 158 aa12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 C9orf40Q8IXQ3 194 aa12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 BPIFB2Q8N4F0 458 aa12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 LRRC75AQ8NAA5 344 aa12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 INTS12Q96CB8 462 aaKnown RBP12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 AKR1E2Q96JD6 320 aa12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 CMTM3Q96MX0 182 aa12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 ZNF587Q96SQ5 575 aaPredicted RBP12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 ABHD6Q9BV23 337 aa12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 GPN3Q9UHW5 284 aaPredicted RBP12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 C9JQL5 133 aa12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 P2RY10O00398 339 aa12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 MUC1P15941 1255 aaPredicted RBP12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 ZNF823P16415 610 aa12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 CASRP41180 1078 aa12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 DHRS2Q13268 280 aa12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 TMEM225Q6GV28 225 aa12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 MAMDC2Q7Z304 686 aaPredicted RBP12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 DMRTC2Q8IXT2 367 aaPredicted RBP12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 GVQW1Q8N7I0 195 aa12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 TAS2R8Q9NYW2 309 aa12.7□□□□□ -0.38
SFSWAP-210ENST00000541286 COLCA2A8K830 154 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 ZNF736B4DX44 427 aaPredicted RBP12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 BCL2L11O43521 198 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 FBXO24O75426 580 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 CLN5O75503 358 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 YIF1AO95070 293 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 NME2P22392 152 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 PRKXP51817 358 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 HSD17B7P56937 341 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 CARFQ8N187 725 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 EXD3Q8N9H8 876 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 C15orf40Q8WUR7 153 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 DCUN1D4Q92564 292 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 C5orf34Q96MH7 638 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 OR8B4Q96RC9 309 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 ASCL3Q9NQ33 180 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 MED29Q9NX70 200 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 ZNF407Q9C0G0 2248 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 PRSS37A4D1T9 235 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 CXADRP78310 365 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 INPP5JQ15735 1006 aaPredicted RBP12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 OR2B11Q5JQS5 317 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 ZNF679Q8IYX0 411 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 STOML3Q8TAV4 291 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 CYYR1Q96J86 154 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 IP6K3Q96PC2 410 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 SLC6A7Q99884 636 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 TCFL5Q9UL49 500 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 LRP12Q9Y561 859 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 CACNA1BQ00975 2339 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 B4E171 279 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 DKK1O94907 266 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 CSRP1P21291 193 aaKnown RBP12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 TSPAN7P41732 249 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 FBXW4P57775 412 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 DCXRQ7Z4W1 244 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 KCNRGQ8N5I3 272 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 OR6N1Q8NGY5 312 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 ZNF721Q8TF20 911 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 NUDCD2Q8WVJ2 157 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 GPX7Q96SL4 187 aaPredicted RBP12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 MRI1Q9BV20 369 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 MFRPQ9BY79 579 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 SPRY4Q9C004 299 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 TGIF2Q9GZN2 237 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 MRPL22Q9NWU5 206 aaKnown RBP12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 TNFSF18Q9UNG2 199 aa12.69□□□□□ -0.38
SFSWAP-210ENST00000541286 TMED7-TICAM2A0A0A6YYA0 188 aa12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 A0A0D9SG52 128 aa12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 M0R036 132 aa12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 SLC17A2O00624 439 aa12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 IL33O95760 270 aa12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 IFNA4P05014 189 aa12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 SFTA3P0C7M3 94 aa12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 PPICP45877 212 aa12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 Q0VFX4 171 aa12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 C21orf62-AS1Q17RA5 79 aa12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 MICBQ29980 383 aa12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 TMEM164Q5U3C3 297 aa12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 KCTD18Q6PI47 426 aaPredicted RBP12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 APCDD1LQ8NCL9 501 aa12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 ZBTB8AQ96BR9 441 aa12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 MVB12AQ96EY5 273 aa12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 POTEKPQ9BYX7 375 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms