RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 CCDC58Q4VC31 144 aa13.15□□□□□ -0.3
DDB1-218ENST00000540784 RPL22L1Q6P5R6 122 aaKnown RBP13.15□□□□□ -0.3
DDB1-218ENST00000540784 ZNF676Q8N7Q3 588 aa13.15□□□□□ -0.3
DDB1-218ENST00000540784 NANOGP1Q8N7R0 232 aa13.15□□□□□ -0.3
DDB1-218ENST00000540784 CCDC54Q8NEL0 328 aa13.15□□□□□ -0.3
DDB1-218ENST00000540784 WFDC11Q8NEX6 87 aa13.15□□□□□ -0.3
DDB1-218ENST00000540784 OR14K1Q8NGZ2 314 aa13.15□□□□□ -0.3
DDB1-218ENST00000540784 FAM168AQ92567 244 aa13.15□□□□□ -0.3
DDB1-218ENST00000540784 HIST1H2AAQ96QV6 131 aa13.15□□□□□ -0.3
DDB1-218ENST00000540784 OR2V2Q96R30 315 aa13.15□□□□□ -0.3
DDB1-218ENST00000540784 CDCA4Q9BXL8 241 aa13.15□□□□□ -0.3
DDB1-218ENST00000540784 DLL4Q9NR61 685 aa13.15□□□□□ -0.3
DDB1-218ENST00000540784 PAK1IP1Q9NWT1 392 aaPredicted RBP13.15□□□□□ -0.3
DDB1-218ENST00000540784 BLOC1S6Q9UL45 172 aa13.15□□□□□ -0.3
DDB1-218ENST00000540784 PIGLQ9Y2B2 252 aa13.15□□□□□ -0.3
DDB1-218ENST00000540784 MPC1Q9Y5U8 109 aa13.15□□□□□ -0.3
DDB1-218ENST00000540784 TEX15Q9BXT5 2789 aa13.15□□□□□ -0.31
DDB1-218ENST00000540784 ZNF816-ZNF321PA0A0X1KG74 233 aa13.14□□□□□ -0.31
DDB1-218ENST00000540784 OR4C45A6NMZ5 311 aa13.14□□□□□ -0.31
DDB1-218ENST00000540784 ZNF850A8MQ14 1090 aa13.14□□□□□ -0.31
DDB1-218ENST00000540784 MYL12BO14950 172 aa13.14□□□□□ -0.31
DDB1-218ENST00000540784 RGS10O43665 173 aa13.14□□□□□ -0.31
DDB1-218ENST00000540784 CCL1P22362 96 aa13.14□□□□□ -0.31
DDB1-218ENST00000540784 EEF1B2P24534 225 aaKnown RBP13.14□□□□□ -0.31
DDB1-218ENST00000540784 GTF2A1P52655 376 aaPredicted RBP13.14□□□□□ -0.31
DDB1-218ENST00000540784 TMEM33P57088 247 aa13.14□□□□□ -0.31
DDB1-218ENST00000540784 HFEQ30201 348 aa13.14□□□□□ -0.31
DDB1-218ENST00000540784 SPRNQ5BIV9 151 aa13.14□□□□□ -0.31
DDB1-218ENST00000540784 ZBTB37Q5TC79 503 aa13.14□□□□□ -0.31
DDB1-218ENST00000540784 SPNS3Q6ZMD2 512 aa13.14□□□□□ -0.31
DDB1-218ENST00000540784 DNM1P46Q6ZS02 220 aa13.14□□□□□ -0.31
DDB1-218ENST00000540784 Q6ZSR3 168 aa13.14□□□□□ -0.31
DDB1-218ENST00000540784 OR8S1Q8NH09 359 aa13.14□□□□□ -0.31
DDB1-218ENST00000540784 OR5AK2Q8NH90 309 aa13.14□□□□□ -0.31
DDB1-218ENST00000540784 C10orf105Q8TEF2 133 aa13.14□□□□□ -0.31
DDB1-218ENST00000540784 ITLN1Q8WWA0 313 aa13.14□□□□□ -0.31
DDB1-218ENST00000540784 CCL17Q92583 94 aa13.14□□□□□ -0.31
DDB1-218ENST00000540784 SGCDQ92629 289 aa13.14□□□□□ -0.31
DDB1-218ENST00000540784 MEGF10Q96KG7 1140 aa13.14□□□□□ -0.31
DDB1-218ENST00000540784 ADAT1Q9BUB4 502 aaKnown RBP13.14□□□□□ -0.31
DDB1-218ENST00000540784 PAPOLGQ9BWT3 736 aaKnown RBP13.14□□□□□ -0.31
DDB1-218ENST00000540784 YTHDF1Q9BYJ9 559 aaKnown RBP13.14□□□□□ -0.31
DDB1-218ENST00000540784 CCDC90BQ9GZT6 254 aa13.14□□□□□ -0.31
DDB1-218ENST00000540784 ABCB9Q9NP78 766 aa13.14□□□□□ -0.31
DDB1-218ENST00000540784 C14orf119Q9NWQ9 140 aa13.14□□□□□ -0.31
DDB1-218ENST00000540784 TREM2Q9NZC2 230 aa13.14□□□□□ -0.31
DDB1-218ENST00000540784 ENPP5Q9UJA9 477 aa13.14□□□□□ -0.31
DDB1-218ENST00000540784 V9GYS6 101 aa13.14□□□□□ -0.31
DDB1-218ENST00000540784 CSMD1Q96PZ7 3565 aa13.14□□□□□ -0.31
DDB1-218ENST00000540784 PRRC2AP48634 2157 aaKnown RBP13.14□□□□□ -0.31
DDB1-218ENST00000540784 ARID1AO14497 2285 aa13.13□□□□□ -0.31
DDB1-218ENST00000540784 TMEM212A6NML5 194 aa13.13□□□□□ -0.31
DDB1-218ENST00000540784 ANXA2P2A6NMY6 339 aa13.13□□□□□ -0.31
DDB1-218ENST00000540784 DHRS7CA6NNS2 312 aa13.13□□□□□ -0.31
DDB1-218ENST00000540784 H3BSH0 61 aa13.13□□□□□ -0.31
DDB1-218ENST00000540784 NDUFS8O00217 210 aa13.13□□□□□ -0.31
DDB1-218ENST00000540784 OGG1O15527 345 aa13.13□□□□□ -0.31
DDB1-218ENST00000540784 ACHEP22303 614 aa13.13□□□□□ -0.31
DDB1-218ENST00000540784 CD200P41217 278 aa13.13□□□□□ -0.31
DDB1-218ENST00000540784 WNT4P56705 351 aa13.13□□□□□ -0.31
DDB1-218ENST00000540784 PRDX4Q13162 271 aa13.13□□□□□ -0.31
DDB1-218ENST00000540784 MAB21L1Q13394 359 aa13.13□□□□□ -0.31
DDB1-218ENST00000540784 MOB3CQ70IA8 216 aa13.13□□□□□ -0.31
DDB1-218ENST00000540784 KRT74Q7RTS7 529 aa13.13□□□□□ -0.31
DDB1-218ENST00000540784 TGIF2LYQ8IUE0 185 aa13.13□□□□□ -0.31
DDB1-218ENST00000540784 CELF2-AS1Q8N7Q2 184 aa13.13□□□□□ -0.31
DDB1-218ENST00000540784 ZNF485Q8NCK3 441 aa13.13□□□□□ -0.31
DDB1-218ENST00000540784 YIPF5Q969M3 257 aa13.13□□□□□ -0.31
DDB1-218ENST00000540784 MICU1Q9BPX6 476 aa13.13□□□□□ -0.31
DDB1-218ENST00000540784 MND1Q9BWT6 205 aa13.13□□□□□ -0.31
DDB1-218ENST00000540784 COMMD4Q9H0A8 199 aa13.13□□□□□ -0.31
DDB1-218ENST00000540784 PPP1R3EQ9H7J1 279 aa13.13□□□□□ -0.31
DDB1-218ENST00000540784 CHODLQ9H9P2 273 aa13.13□□□□□ -0.31
DDB1-218ENST00000540784 TRIM36Q9NQ86 728 aa13.13□□□□□ -0.31
DDB1-218ENST00000540784 HHLA2Q9UM44 414 aa13.13□□□□□ -0.31
DDB1-218ENST00000540784 PPP1R3CQ9UQK1 317 aa13.13□□□□□ -0.31
DDB1-218ENST00000540784 LRRC42Q9Y546 428 aa13.13□□□□□ -0.31
DDB1-218ENST00000540784 CCDC168Q8NDH2 2452 aa13.12□□□□□ -0.31
DDB1-218ENST00000540784 IGHV4-30-2A0A087WSY4 118 aa13.12□□□□□ -0.31
DDB1-218ENST00000540784 IGHV3-64DA0A0J9YX35 117 aa13.12□□□□□ -0.31
DDB1-218ENST00000540784 A6NIN4 97 aa13.12□□□□□ -0.31
DDB1-218ENST00000540784 ZFPL1O95159 310 aa13.12□□□□□ -0.31
DDB1-218ENST00000540784 SERPINA3P01011 423 aa13.12□□□□□ -0.31
DDB1-218ENST00000540784 GRPP07492 148 aa13.12□□□□□ -0.31
DDB1-218ENST00000540784 FAHP16930 419 aa13.12□□□□□ -0.31
DDB1-218ENST00000540784 GIFP27352 417 aa13.12□□□□□ -0.31
DDB1-218ENST00000540784 CDH15P55291 814 aa13.12□□□□□ -0.31
DDB1-218ENST00000540784 ZDHHC23Q8IYP9 409 aa13.12□□□□□ -0.31
DDB1-218ENST00000540784 DVL3Q92997 716 aaPredicted RBP13.12□□□□□ -0.31
DDB1-218ENST00000540784 PIMREGQ9BSJ6 248 aa13.12□□□□□ -0.31
DDB1-218ENST00000540784 GCM1Q9NP62 436 aa13.12□□□□□ -0.31
DDB1-218ENST00000540784 LOC100289279A0A1B0GTE1 492 aa13.11□□□□□ -0.31
DDB1-218ENST00000540784 LOC107986453A0A1B0GWG9 222 aa13.11□□□□□ -0.31
DDB1-218ENST00000540784 TRIM64A6NGJ6 449 aa13.11□□□□□ -0.31
DDB1-218ENST00000540784 TRIM64BA6NI03 449 aa13.11□□□□□ -0.31
DDB1-218ENST00000540784 IFNL4K9M1U5 179 aa13.11□□□□□ -0.31
DDB1-218ENST00000540784 PPIHO43447 177 aaKnown RBP13.11□□□□□ -0.31
DDB1-218ENST00000540784 RP2O75695 350 aa13.11□□□□□ -0.31
DDB1-218ENST00000540784 LALBAP00709 142 aa13.11□□□□□ -0.31
DDB1-218ENST00000540784 NRASP01111 189 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms