RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 BOLLQ8N9W6 283 aaKnown RBP12.6□□□□□ -0.39
UBE3B-212ENST00000540230 SPERTQ8NA61 448 aa12.6□□□□□ -0.39
UBE3B-212ENST00000540230 CSNK2A3Q8NEV1 391 aa12.6□□□□□ -0.39
UBE3B-212ENST00000540230 OR11L1Q8NGX0 322 aa12.6□□□□□ -0.39
UBE3B-212ENST00000540230 OR8S1Q8NH09 359 aa12.6□□□□□ -0.39
UBE3B-212ENST00000540230 OR51E1Q8TCB6 317 aa12.6□□□□□ -0.39
UBE3B-212ENST00000540230 HPSE2Q8WWQ2 592 aa12.6□□□□□ -0.39
UBE3B-212ENST00000540230 ITPKCQ96DU7 683 aa12.6□□□□□ -0.39
UBE3B-212ENST00000540230 RNF7Q9UBF6 113 aa12.6□□□□□ -0.39
UBE3B-212ENST00000540230 NUFIP1Q9UHK0 495 aaKnown RBP12.6□□□□□ -0.39
UBE3B-212ENST00000540230 ORC6Q9Y5N6 252 aa12.6□□□□□ -0.39
UBE3B-212ENST00000540230 DOCK11Q5JSL3 2073 aa12.59□□□□□ -0.39
UBE3B-212ENST00000540230 A0A0G2JMP0 313 aa12.59□□□□□ -0.39
UBE3B-212ENST00000540230 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.59□□□□□ -0.39
UBE3B-212ENST00000540230 A0A0U1RQV5 110 aa12.59□□□□□ -0.39
UBE3B-212ENST00000540230 A0A0X1KG70 313 aa12.59□□□□□ -0.39
UBE3B-212ENST00000540230 A0A1W2PQL4 384 aaPredicted RBP12.59□□□□□ -0.39
UBE3B-212ENST00000540230 ZNF850A8MQ14 1090 aa12.59□□□□□ -0.39
UBE3B-212ENST00000540230 A8MXK9 166 aa12.59□□□□□ -0.39
UBE3B-212ENST00000540230 ENTPD6O75354 484 aa12.59□□□□□ -0.39
UBE3B-212ENST00000540230 FOXH1O75593 365 aa12.59□□□□□ -0.39
UBE3B-212ENST00000540230 TTRP02766 147 aa12.59□□□□□ -0.39
UBE3B-212ENST00000540230 RPS2P15880 293 aaKnown RBP12.59□□□□□ -0.39
UBE3B-212ENST00000540230 ADRA2CP18825 462 aa12.59□□□□□ -0.39
UBE3B-212ENST00000540230 THBS2P35442 1172 aa12.59□□□□□ -0.39
UBE3B-212ENST00000540230 PRDX4Q13162 271 aa12.59□□□□□ -0.39
UBE3B-212ENST00000540230 PLPP7Q8NBV4 271 aa12.59□□□□□ -0.39
UBE3B-212ENST00000540230 OR1M1Q8NGA1 313 aa12.59□□□□□ -0.39
UBE3B-212ENST00000540230 OR4M2Q8NGB6 313 aa12.59□□□□□ -0.39
UBE3B-212ENST00000540230 PIGCQ92535 297 aa12.59□□□□□ -0.39
UBE3B-212ENST00000540230 FAM71F1Q96KD3 344 aaPredicted RBP12.59□□□□□ -0.39
UBE3B-212ENST00000540230 MNTQ99583 582 aa12.59□□□□□ -0.39
UBE3B-212ENST00000540230 C9orf16Q9BUW7 83 aa12.59□□□□□ -0.39
UBE3B-212ENST00000540230 GPR84Q9NQS5 396 aa12.59□□□□□ -0.39
UBE3B-212ENST00000540230 IMPAD1Q9NX62 359 aa12.59□□□□□ -0.39
UBE3B-212ENST00000540230 OPN4Q9UHM6 478 aa12.59□□□□□ -0.39
UBE3B-212ENST00000540230 hCG_1807616A0A1W2PRN6 198 aa12.58□□□□□ -0.4
UBE3B-212ENST00000540230 ANKRD65E5RJM6 399 aa12.58□□□□□ -0.4
UBE3B-212ENST00000540230 PHYHO14832 338 aa12.58□□□□□ -0.4
UBE3B-212ENST00000540230 FSTL3O95633 263 aa12.58□□□□□ -0.4
UBE3B-212ENST00000540230 BAG2O95816 211 aa12.58□□□□□ -0.4
UBE3B-212ENST00000540230 GNALP38405 381 aa12.58□□□□□ -0.4
UBE3B-212ENST00000540230 EGR3Q06889 387 aa12.58□□□□□ -0.4
UBE3B-212ENST00000540230 ZNF829Q3KNS6 432 aaPredicted RBP12.58□□□□□ -0.4
UBE3B-212ENST00000540230 ZNF684Q5T5D7 378 aa12.58□□□□□ -0.4
UBE3B-212ENST00000540230 C10orf67Q8IYJ2 551 aa12.58□□□□□ -0.4
UBE3B-212ENST00000540230 OR10H4Q8NGA5 316 aa12.58□□□□□ -0.4
UBE3B-212ENST00000540230 C14orf119Q9NWQ9 140 aa12.58□□□□□ -0.4
UBE3B-212ENST00000540230 CTSZQ9UBR2 303 aa12.58□□□□□ -0.4
UBE3B-212ENST00000540230 ZNF391Q9UJN7 358 aa12.58□□□□□ -0.4
UBE3B-212ENST00000540230 GTF2A1LQ9UNN4 478 aa12.58□□□□□ -0.4
UBE3B-212ENST00000540230 POLR3KQ9Y2Y1 108 aaPredicted RBP12.58□□□□□ -0.4
UBE3B-212ENST00000540230 R4GMQ9 66 aa12.58□□□□□ -0.4
UBE3B-212ENST00000540230 ACOD1A6NK06 481 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 LOC110117498-PIK3R3F6TDL0 507 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 RPP14O95059 124 aaKnown RBP12.57□□□□□ -0.4
UBE3B-212ENST00000540230 CST4P01036 141 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 LHBP01229 141 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 OR2T7P0C7T2 308 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 GABRB1P18505 474 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 ELF3P78545 371 aaPredicted RBP12.57□□□□□ -0.4
UBE3B-212ENST00000540230 ZNF85Q03923 595 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 POU4F2Q12837 409 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 ESCO2Q56NI9 601 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 WDR82Q6UXN9 313 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 ZBTB49Q6ZSB9 765 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 COMMD2Q86X83 199 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 OR2T27Q8NH04 317 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 TRUB1Q8WWH5 349 aaKnown RBP12.57□□□□□ -0.4
UBE3B-212ENST00000540230 SEH1LQ96EE3 360 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 SSBP3Q9BWW4 388 aaPredicted RBP12.57□□□□□ -0.4
UBE3B-212ENST00000540230 SLC22A13Q9Y226 551 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 LRCH1Q9Y2L9 728 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 MPC1Q9Y5U8 109 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 COL6A5A8TX70 2615 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 IGHV3OR15-7A0A075B7D8 119 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 LGALS8O00214 317 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 DLGAP1O14490 977 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 CDIPTO14735 213 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 FCN3O75636 299 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 FAHP16930 419 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 PSMB10P40306 273 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 SNRPGP62308 76 aaKnown RBP12.57□□□□□ -0.4
UBE3B-212ENST00000540230 PAX2Q02962 417 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 CEP78Q5JTW2 689 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 LIPNQ5VXI9 398 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 ZNF841Q6ZN19 808 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 DCDC5Q6ZRR9 648 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 ENTHD1Q8IYW4 607 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 GALNT4Q8N4A0 578 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 YIPF7Q8N8F6 280 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 LRRC29Q8WV35 223 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 OR5P3Q8WZ94 311 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 RPL3LQ92901 407 aaKnown RBP12.57□□□□□ -0.4
UBE3B-212ENST00000540230 RFKQ969G6 155 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 NEIL1Q96FI4 390 aaPredicted RBP12.57□□□□□ -0.4
UBE3B-212ENST00000540230 TLNRD1Q9H1K6 362 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 C7orf69Q9H7B7 122 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 MIOXQ9UGB7 285 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 OR52A1Q9UKL2 312 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms