RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 SAT2Q96F10 170 aaPredicted RBP12.32□□□□□ -0.44
SCNN1A-215ENST00000540037 FAM71F1Q96KD3 344 aaPredicted RBP12.32□□□□□ -0.44
SCNN1A-215ENST00000540037 C2orf50Q96LR7 162 aa12.32□□□□□ -0.44
SCNN1A-215ENST00000540037 BCL2L14Q9BZR8 327 aa12.32□□□□□ -0.44
SCNN1A-215ENST00000540037 MIOXQ9UGB7 285 aa12.32□□□□□ -0.44
SCNN1A-215ENST00000540037 C5orf63A6NC05 138 aa12.32□□□□□ -0.44
SCNN1A-215ENST00000540037 ALG1L2C9J202 215 aa12.32□□□□□ -0.44
SCNN1A-215ENST00000540037 FTCDNL1E5RQL4 147 aa12.32□□□□□ -0.44
SCNN1A-215ENST00000540037 NPIPA5E9PKD4 350 aa12.32□□□□□ -0.44
SCNN1A-215ENST00000540037 C5orf67F2Z3F1 127 aa12.32□□□□□ -0.44
SCNN1A-215ENST00000540037 NQO2P16083 231 aa12.32□□□□□ -0.44
SCNN1A-215ENST00000540037 ZNF708P17019 499 aa12.32□□□□□ -0.44
SCNN1A-215ENST00000540037 AMY2BP19961 511 aa12.32□□□□□ -0.44
SCNN1A-215ENST00000540037 C1QL2Q7Z5L3 287 aa12.32□□□□□ -0.44
SCNN1A-215ENST00000540037 OR5AS1Q8N127 324 aa12.32□□□□□ -0.44
SCNN1A-215ENST00000540037 OR5H2Q8NGV7 314 aa12.32□□□□□ -0.44
SCNN1A-215ENST00000540037 DZANK1Q9NVP4 752 aa12.32□□□□□ -0.44
SCNN1A-215ENST00000540037 FBXL17Q9UF56 701 aa12.32□□□□□ -0.44
SCNN1A-215ENST00000540037 NPIPA1Q9UND3 350 aa12.32□□□□□ -0.44
SCNN1A-215ENST00000540037 ASXL3Q9C0F0 2248 aa12.32□□□□□ -0.44
SCNN1A-215ENST00000540037 H3BML4 177 aa12.31□□□□□ -0.44
SCNN1A-215ENST00000540037 UBE2CO00762 179 aa12.31□□□□□ -0.44
SCNN1A-215ENST00000540037 TSPAN2O60636 221 aa12.31□□□□□ -0.44
SCNN1A-215ENST00000540037 C1QL1O75973 258 aa12.31□□□□□ -0.44
SCNN1A-215ENST00000540037 SULT1A2P50226 295 aa12.31□□□□□ -0.44
SCNN1A-215ENST00000540037 IL15RAQ13261 267 aa12.31□□□□□ -0.44
SCNN1A-215ENST00000540037 RSPO4Q2I0M5 234 aaPredicted RBP12.31□□□□□ -0.44
SCNN1A-215ENST00000540037 SHISA6Q6ZSJ9 500 aa12.31□□□□□ -0.44
SCNN1A-215ENST00000540037 TMPRSS9Q7Z410 1059 aa12.31□□□□□ -0.44
SCNN1A-215ENST00000540037 ABHD12BQ7Z5M8 362 aaPredicted RBP12.31□□□□□ -0.44
SCNN1A-215ENST00000540037 KCNK17Q96T54 332 aa12.31□□□□□ -0.44
SCNN1A-215ENST00000540037 VDAC3Q9Y277 283 aa12.31□□□□□ -0.44
SCNN1A-215ENST00000540037 IGKV1D-8A0A087WSZ0 117 aa12.31□□□□□ -0.44
SCNN1A-215ENST00000540037 MFNGO00587 321 aa12.31□□□□□ -0.44
SCNN1A-215ENST00000540037 EIF1BO60739 113 aaKnown RBP12.31□□□□□ -0.44
SCNN1A-215ENST00000540037 FOLR2P14207 255 aa12.31□□□□□ -0.44
SCNN1A-215ENST00000540037 ACKR3P25106 362 aa12.31□□□□□ -0.44
SCNN1A-215ENST00000540037 EIF1P41567 113 aaKnown RBP12.31□□□□□ -0.44
SCNN1A-215ENST00000540037 MFAP5Q13361 173 aa12.31□□□□□ -0.44
SCNN1A-215ENST00000540037 FZD2Q14332 565 aa12.31□□□□□ -0.44
SCNN1A-215ENST00000540037 C15orf54Q8N8G6 183 aa12.31□□□□□ -0.44
SCNN1A-215ENST00000540037 ERGIC1Q969X5 290 aa12.31□□□□□ -0.44
SCNN1A-215ENST00000540037 CDC6Q99741 560 aa12.31□□□□□ -0.44
SCNN1A-215ENST00000540037 ZNF251Q9BRH9 671 aa12.31□□□□□ -0.44
SCNN1A-215ENST00000540037 EGLN1Q9GZT9 426 aa12.31□□□□□ -0.44
SCNN1A-215ENST00000540037 RAB33BQ9H082 229 aa12.31□□□□□ -0.44
SCNN1A-215ENST00000540037 EHFQ9NZC4 300 aa12.31□□□□□ -0.44
SCNN1A-215ENST00000540037 C7orf77A4D0Y5 90 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 M0R036 132 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 S100A9P06702 114 aaKnown RBP12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 ZNF20P17024 532 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 GABRA4P48169 554 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 PCK2Q16822 640 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 IAH1Q2TAA2 248 aaPredicted RBP12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 TMEM268Q5VZI3 342 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 LURAP1LQ8IV03 231 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 FAM24BQ8N5W8 94 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 ZNF248Q8NDW4 579 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 THAP3Q8WTV1 239 aaPredicted RBP12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 TCEAL3Q969E4 200 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 TMEM59Q9BXS4 323 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 TINAGQ9UJW2 476 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 LSM5Q9Y4Y9 91 aaKnown RBP12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 TIMM10BQ9Y5J6 103 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 SCGB1D2O95969 90 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 IGHMP01871 453 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 HCKP08631 526 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 SMIM6P0DI80 62 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 ZNF14P17017 642 aaPredicted RBP12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 ZNF17P17021 662 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 TBPP20226 339 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 RPL12P30050 165 aaKnown RBP12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 FCGR2CP31995 323 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 PTGER4P35408 488 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 OR3A2P47893 321 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 DVL1P1P54792 670 aaPredicted RBP12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 SNU13P55769 128 aaKnown RBP12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 TMEM33P57088 247 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 YPEL5P62699 121 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 CSNK2A1P68400 391 aaPredicted RBP12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 ACER2Q5QJU3 275 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 VAX1Q5SQQ9 334 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 HLA-DQA1Q5Y7H0 255 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 ADAM5Q6NVV9 412 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 KLHL24Q6TFL4 600 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 CSNK2A3Q8NEV1 391 aa12.3□□□□□ -0.44
SCNN1A-215ENST00000540037 IGHV3-20A0A0C4DH32 117 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 TCRBV21S2A2A0A5A6 115 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 TMEM150CB9EJG8 249 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 E9PLN8 166 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 IGHV4-34P06331 123 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 THEGLP0DJG4 465 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 GLI4P10075 376 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 FPR2P25090 351 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 BIDP55957 195 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 MIDNQ504T8 468 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 GRINAQ7Z429 371 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 PEG10Q86TG7 708 aaKnown RBP12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 ARRDC1Q8N5I2 433 aa12.29□□□□□ -0.44
SCNN1A-215ENST00000540037 SEMA6DQ8NFY4 1073 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms