RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 OR9Q1Q8NGQ5 310 aa9.45□□□□□ -0.9
CLSTN3-209ENST00000539982 OR2AE1Q8NHA4 323 aa9.45□□□□□ -0.9
CLSTN3-209ENST00000539982 H1FXQ92522 213 aaKnown RBP9.45□□□□□ -0.9
CLSTN3-209ENST00000539982 SPTSSAQ969W0 71 aa9.45□□□□□ -0.9
CLSTN3-209ENST00000539982 ZNF799Q96GE5 643 aa9.45□□□□□ -0.9
CLSTN3-209ENST00000539982 FAM46AQ96IP4 442 aaKnown RBP9.45□□□□□ -0.9
CLSTN3-209ENST00000539982 CITED2Q99967 270 aaPredicted RBP9.45□□□□□ -0.9
CLSTN3-209ENST00000539982 OCSTAMPQ9BR26 566 aa9.45□□□□□ -0.9
CLSTN3-209ENST00000539982 BBIP1A8MTZ0 92 aa9.44□□□□□ -0.9
CLSTN3-209ENST00000539982 B2RBV5 119 aa9.44□□□□□ -0.9
CLSTN3-209ENST00000539982 FXYD1O00168 92 aa9.44□□□□□ -0.9
CLSTN3-209ENST00000539982 CHST1O43916 411 aa9.44□□□□□ -0.9
CLSTN3-209ENST00000539982 NPPAP01160 153 aa9.44□□□□□ -0.9
CLSTN3-209ENST00000539982 FXYD6P3P58550 94 aa9.44□□□□□ -0.9
CLSTN3-209ENST00000539982 GLYATL3Q5SZD4 288 aa9.44□□□□□ -0.9
CLSTN3-209ENST00000539982 WDR82Q6UXN9 313 aa9.44□□□□□ -0.9
CLSTN3-209ENST00000539982 DPY19L4Q7Z388 723 aa9.44□□□□□ -0.9
CLSTN3-209ENST00000539982 VTCN1Q7Z7D3 282 aa9.44□□□□□ -0.9
CLSTN3-209ENST00000539982 Q8N2B8 174 aa9.44□□□□□ -0.9
CLSTN3-209ENST00000539982 LNX2Q8N448 690 aa9.44□□□□□ -0.9
CLSTN3-209ENST00000539982 OR1M1Q8NGA1 313 aa9.44□□□□□ -0.9
CLSTN3-209ENST00000539982 OR5T2Q8NGG2 359 aa9.44□□□□□ -0.9
CLSTN3-209ENST00000539982 OR8S1Q8NH09 359 aa9.44□□□□□ -0.9
CLSTN3-209ENST00000539982 PIFOQ8TCI5 191 aa9.44□□□□□ -0.9
CLSTN3-209ENST00000539982 WIPF2Q8TF74 440 aaPredicted RBP9.44□□□□□ -0.9
CLSTN3-209ENST00000539982 SLC7A6OSQ96CW6 309 aaPredicted RBP9.44□□□□□ -0.9
CLSTN3-209ENST00000539982 SEH1LQ96EE3 360 aa9.44□□□□□ -0.9
CLSTN3-209ENST00000539982 MAP6Q96JE9 813 aa9.44□□□□□ -0.9
CLSTN3-209ENST00000539982 NKX3-1Q99801 234 aaPredicted RBP9.44□□□□□ -0.9
CLSTN3-209ENST00000539982 DNTTIP1Q9H147 329 aa9.44□□□□□ -0.9
CLSTN3-209ENST00000539982 ANKRD19PQ9H560 264 aa9.44□□□□□ -0.9
CLSTN3-209ENST00000539982 ZNF702PQ9H963 129 aa9.44□□□□□ -0.9
CLSTN3-209ENST00000539982 HAO2Q9NYQ3 351 aa9.44□□□□□ -0.9
CLSTN3-209ENST00000539982 WI2-2373I1.2A0A1W2PRP0 233 aa9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 ANKRD30BLA7E2S9 258 aa9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 FAM220BPB1ANY3 271 aa9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 DNAJC8O75937 253 aaPredicted RBP9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 RENP00797 406 aa9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 SELLP14151 372 aa9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 ANOS1P23352 680 aa9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 OTX1P32242 354 aaPredicted RBP9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 MSX2P35548 267 aaPredicted RBP9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 DDOSTP39656 456 aa9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 GSK3BP49841 420 aa9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 MXRA7P84157 204 aa9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 CD69Q07108 199 aa9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 HABP2Q14520 560 aaPredicted RBP9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 STUMQ69YW2 141 aa9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 DRAM2Q6UX65 266 aa9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 ASRGL1Q7L266 308 aa9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 WDR86Q86TI4 376 aa9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 ZBTB46Q86UZ6 589 aa9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 OR2T12Q8NG77 320 aa9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 OR56B2PQ8NGI1 322 aa9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 OR5D13Q8NGL4 314 aa9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 DUS3LQ96G46 650 aaKnown RBP9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 MED30Q96HR3 178 aa9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 RSRC1Q96IZ7 334 aaKnown RBP9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 ERMAPQ96PL5 475 aaPredicted RBP9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 NMNAT3Q96T66 252 aa9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 BTBD10Q9BSF8 475 aa9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 C1orf21Q9H246 121 aa9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 OPA3Q9H6K4 179 aa9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 EFCAB1Q9HAE3 211 aa9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 SLC25A10Q9UBX3 287 aaPredicted RBP9.43□□□□□ -0.9
CLSTN3-209ENST00000539982 A0A1W2PQ09 198 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 UNC119BA6NIH7 251 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 ANKRD65E5RJM6 399 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 H0YAE9 185 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 CDIPTO14735 213 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 GYG2O15488 501 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 TIPRLO75663 272 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 HLA-DQA2P01906 255 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 PAX6P26367 422 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 POU1F1P28069 291 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 OMPP47874 163 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 NUDT2P50583 147 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 BMXP51813 675 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 CAV3P56539 151 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 CSNK2BP67870 215 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 DNAL1Q4LDG9 190 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 COQ5Q5HYK3 327 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 SMARCD3Q6STE5 483 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 ZNF788Q6ZQV5 615 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 RCN3Q96D15 328 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 DDOQ99489 341 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 B9D2Q9BPU9 175 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 CDCA4Q9BXL8 241 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 WNT10AQ9GZT5 417 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 RPRD1BQ9NQG5 326 aaKnown RBP9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 MRPL22Q9NWU5 206 aaKnown RBP9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 NDE1Q9NXR1 346 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 TAS2R1Q9NYW7 299 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 KCNG2Q9UJ96 466 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 ZNF391Q9UJN7 358 aa9.42□□□□□ -0.9
CLSTN3-209ENST00000539982 A0A1W2PRQ8 180 aa9.41□□□□□ -0.9
CLSTN3-209ENST00000539982 NKX6-3A6NJ46 265 aa9.41□□□□□ -0.9
CLSTN3-209ENST00000539982 MRASO14807 208 aa9.41□□□□□ -0.9
CLSTN3-209ENST00000539982 ARPC3O15145 178 aa9.41□□□□□ -0.9
CLSTN3-209ENST00000539982 XRCC2O43543 280 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms