RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 SPRED2Q7Z698 418 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 TMEM173Q86WV6 379 aaPredicted RBP5.47□□□□□ -1.53
SNHG1-211ENST00000539921 CPOQ8IVL8 374 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 DTWD2Q8NBA8 298 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 OR1K1Q8NGR3 316 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 OR11L1Q8NGX0 322 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 SLC38A5Q8WUX1 472 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 HMGB4Q8WW32 186 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 WFDC12Q8WWY7 111 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 ERGIC1Q969X5 290 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 MRPL24Q96A35 216 aaKnown RBP5.47□□□□□ -1.53
SNHG1-211ENST00000539921 MOAP1Q96BY2 351 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 REEP6Q96HR9 211 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 FAM46AQ96IP4 442 aaKnown RBP5.47□□□□□ -1.53
SNHG1-211ENST00000539921 EAF1Q96JC9 268 aaPredicted RBP5.47□□□□□ -1.53
SNHG1-211ENST00000539921 MS4A10Q96PG2 267 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 TBX15Q96SF7 602 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 CD180Q99467 661 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 ARHGDIGQ99819 225 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 C20orf24Q9BUV8 137 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 ELOVL1Q9BW60 279 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 GPR174Q9BXC1 333 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 SLC46A2Q9BY10 475 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 PKIBQ9C010 78 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 CST11Q9H112 138 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 TXNRD2Q9NNW7 524 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 TMEM9BQ9NQ34 198 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 P2RX2Q9UBL9 471 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 NAT8Q9UHE5 227 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 RAB22AQ9UL26 194 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 AK6Q9Y3D8 172 aaKnown RBP5.47□□□□□ -1.53
SNHG1-211ENST00000539921 INSL6Q9Y581 213 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 WSB1Q9Y6I7 421 aa5.47□□□□□ -1.53
SNHG1-211ENST00000539921 IGLV3-10A0A075B6K4 115 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 TRAV8-7A0A075B6U6 113 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 TRBV5-7A0A0A0MS05 114 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 NPIPA5A0A0B4J1W7 369 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 TRBV5-4A0A0C4DH59 114 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 A0A1W2PRS3 328 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 NKX2-6A6NCS4 301 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 ANKUB1A6NFN9 424 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 MSGN1A6NI15 193 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 RIIAD1A6NNX1 92 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 ZNF814B7Z6K7 855 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 NPIPA5E9PKD4 350 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 NPIPA3F8WFD2 350 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 SLC17A2O00624 439 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 GEMIN2O14893 280 aaKnown RBP5.46□□□□□ -1.54
SNHG1-211ENST00000539921 AGPAT2O15120 278 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 IRAK2O43187 625 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 FGF17O60258 216 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 B3GAT3O94766 335 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 SFT2D2O95562 160 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 B3GALT4O96024 378 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 MBPP02686 304 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-211ENST00000539921 PFN1P07737 140 aaKnown RBP5.46□□□□□ -1.54
SNHG1-211ENST00000539921 TACSTD2P09758 323 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 FURINP09958 794 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 C1QTNF9P0C862 333 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 EDNRAP25101 427 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 RPL12P30050 165 aaKnown RBP5.46□□□□□ -1.54
SNHG1-211ENST00000539921 GABRA3P34903 492 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 ECI1P42126 302 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 FRKP42685 505 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-211ENST00000539921 CYB561P49447 251 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 COMPP49747 757 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-211ENST00000539921 CNN1P51911 297 aaKnown RBP5.46□□□□□ -1.54
SNHG1-211ENST00000539921 RPS26P62854 115 aaKnown RBP5.46□□□□□ -1.54
SNHG1-211ENST00000539921 PITX1P78337 314 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-211ENST00000539921 BTG2P78543 158 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 RELBQ01201 579 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 ZNF92Q03936 586 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 TGM3Q08188 693 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 TUSC3Q13454 348 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 EXT1Q16394 746 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 C2orf76Q3KRA6 126 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 TMEM41BQ5BJD5 291 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 MS4A13Q5J8X5 152 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 SPATA46Q5T0L3 261 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 ARTNQ5T4W7 220 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 OR4A47Q6IF82 309 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 FAM151BQ6UXP7 276 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 NIT1Q86X76 327 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 TCTEX1D1Q8N7M0 179 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 ZNF615Q8N8J6 731 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 APCDD1LQ8NCL9 501 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 OR10H4Q8NGA5 316 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 OR10W1Q8NGF6 305 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 OR5A2Q8NGI9 324 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 ADAMTS15Q8TE58 950 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 OR5P2Q8WZ92 322 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 DIO2Q92813 273 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 BCL2L2Q92843 193 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-211ENST00000539921 SPSB1Q96BD6 273 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 PINX1Q96BK5 328 aaKnown RBP5.46□□□□□ -1.54
SNHG1-211ENST00000539921 FGGYQ96C11 551 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 SLAMF6Q96DU3 332 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 PELI1Q96FA3 418 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 SEC22AQ96IW7 307 aa5.46□□□□□ -1.54
SNHG1-211ENST00000539921 CAPNS2Q96L46 248 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms