RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 DYRK2Q92630 601 aa12.68□□□□□ -0.38
UBE3B-211ENST00000539843 DMRTB1Q96MA1 342 aa12.68□□□□□ -0.38
UBE3B-211ENST00000539843 HIST1H2AAQ96QV6 131 aa12.68□□□□□ -0.38
UBE3B-211ENST00000539843 TBX15Q96SF7 602 aa12.68□□□□□ -0.38
UBE3B-211ENST00000539843 NMNAT2Q9BZQ4 307 aa12.68□□□□□ -0.38
UBE3B-211ENST00000539843 DPAGT1Q9H3H5 408 aa12.68□□□□□ -0.38
UBE3B-211ENST00000539843 CNTD2Q9H8S5 307 aa12.68□□□□□ -0.38
UBE3B-211ENST00000539843 DNAJC27Q9NZQ0 273 aa12.68□□□□□ -0.38
UBE3B-211ENST00000539843 ONECUT1Q9UBC0 465 aa12.68□□□□□ -0.38
UBE3B-211ENST00000539843 CENPVL3A0A0U1RRI6 287 aa12.67□□□□□ -0.38
UBE3B-211ENST00000539843 M0QZ24 198 aa12.67□□□□□ -0.38
UBE3B-211ENST00000539843 TIMM23O14925 209 aa12.67□□□□□ -0.38
UBE3B-211ENST00000539843 NDUFA7O95182 113 aa12.67□□□□□ -0.38
UBE3B-211ENST00000539843 ZNF121P58317 390 aaPredicted RBP12.67□□□□□ -0.38
UBE3B-211ENST00000539843 ARF6P62330 175 aa12.67□□□□□ -0.38
UBE3B-211ENST00000539843 FAM3AP98173 230 aa12.67□□□□□ -0.38
UBE3B-211ENST00000539843 GUCA2AQ02747 115 aa12.67□□□□□ -0.38
UBE3B-211ENST00000539843 TRIM25Q14258 630 aaKnown RBP12.67□□□□□ -0.38
UBE3B-211ENST00000539843 CDONQ4KMG0 1287 aa12.67□□□□□ -0.38
UBE3B-211ENST00000539843 BRICD5Q6PL45 260 aa12.67□□□□□ -0.38
UBE3B-211ENST00000539843 KCTD8Q6ZWB6 473 aa12.67□□□□□ -0.38
UBE3B-211ENST00000539843 ZNF454Q8N9F8 522 aa12.67□□□□□ -0.38
UBE3B-211ENST00000539843 GIPC3Q8TF64 312 aa12.67□□□□□ -0.38
UBE3B-211ENST00000539843 NPRL2Q8WTW4 380 aa12.67□□□□□ -0.38
UBE3B-211ENST00000539843 RNF133Q8WVZ7 376 aa12.67□□□□□ -0.38
UBE3B-211ENST00000539843 ZNRF4Q8WWF5 429 aa12.67□□□□□ -0.38
UBE3B-211ENST00000539843 ABHD6Q9BV23 337 aa12.67□□□□□ -0.38
UBE3B-211ENST00000539843 CHIAQ9BZP6 476 aa12.67□□□□□ -0.38
UBE3B-211ENST00000539843 ZNF556Q9HAH1 456 aa12.67□□□□□ -0.38
UBE3B-211ENST00000539843 SMURF1Q9HCE7 757 aa12.67□□□□□ -0.38
UBE3B-211ENST00000539843 BRD7Q9NPI1 651 aa12.67□□□□□ -0.38
UBE3B-211ENST00000539843 RPUSD1Q9UJJ7 312 aaKnown RBP12.67□□□□□ -0.38
UBE3B-211ENST00000539843 ZNF391Q9UJN7 358 aa12.67□□□□□ -0.38
UBE3B-211ENST00000539843 MPC1Q9Y5U8 109 aa12.67□□□□□ -0.38
UBE3B-211ENST00000539843 SOX21Q9Y651 276 aaPredicted RBP12.67□□□□□ -0.38
UBE3B-211ENST00000539843 IGHV3OR15-7A0A075B7D8 119 aa12.66□□□□□ -0.38
UBE3B-211ENST00000539843 hCG_38984A0A1B0GV85 526 aa12.66□□□□□ -0.38
UBE3B-211ENST00000539843 CLPSL1A2RUU4 121 aa12.66□□□□□ -0.38
UBE3B-211ENST00000539843 TMEM210A6NLX4 147 aa12.66□□□□□ -0.38
UBE3B-211ENST00000539843 PRR23D1E9PI22 279 aaPredicted RBP12.66□□□□□ -0.38
UBE3B-211ENST00000539843 GLCEO94923 617 aa12.66□□□□□ -0.38
UBE3B-211ENST00000539843 LHBP01229 141 aa12.66□□□□□ -0.38
UBE3B-211ENST00000539843 LYNP07948 512 aa12.66□□□□□ -0.38
UBE3B-211ENST00000539843 PRR23D2P0DMB1 279 aaPredicted RBP12.66□□□□□ -0.38
UBE3B-211ENST00000539843 RAP2AP10114 183 aa12.66□□□□□ -0.38
UBE3B-211ENST00000539843 CLUP10909 449 aa12.66□□□□□ -0.38
UBE3B-211ENST00000539843 MMP9P14780 707 aa12.66□□□□□ -0.38
UBE3B-211ENST00000539843 GSK3AP49840 483 aa12.66□□□□□ -0.38
UBE3B-211ENST00000539843 PPP1R8Q12972 351 aaKnown RBP12.66□□□□□ -0.38
UBE3B-211ENST00000539843 GDPGP1Q6ZNW5 385 aa12.66□□□□□ -0.38
UBE3B-211ENST00000539843 PIGWQ7Z7B1 504 aa12.66□□□□□ -0.38
UBE3B-211ENST00000539843 TIGD4Q8IY51 512 aa12.66□□□□□ -0.38
UBE3B-211ENST00000539843 GALNT4Q8N4A0 578 aa12.66□□□□□ -0.38
UBE3B-211ENST00000539843 KIR3DL3Q8N743 410 aa12.66□□□□□ -0.38
UBE3B-211ENST00000539843 SGK3Q96BR1 496 aa12.66□□□□□ -0.38
UBE3B-211ENST00000539843 NSL1Q96IY1 281 aa12.66□□□□□ -0.38
UBE3B-211ENST00000539843 CCT8L2Q96SF2 557 aa12.66□□□□□ -0.38
UBE3B-211ENST00000539843 DNTTIP1Q9H147 329 aa12.66□□□□□ -0.38
UBE3B-211ENST00000539843 OR51V1Q9H2C8 321 aa12.66□□□□□ -0.38
UBE3B-211ENST00000539843 RASSF4Q9H2L5 321 aa12.66□□□□□ -0.38
UBE3B-211ENST00000539843 NIPAL2Q9H841 368 aa12.66□□□□□ -0.38
UBE3B-211ENST00000539843 DOCK11Q5JSL3 2073 aa12.65□□□□□ -0.38
UBE3B-211ENST00000539843 TCRBV5S2A0A599 114 aa12.65□□□□□ -0.38
UBE3B-211ENST00000539843 ARRDC5A6NEK1 342 aa12.65□□□□□ -0.38
UBE3B-211ENST00000539843 FAM183AA6NL82 134 aa12.65□□□□□ -0.38
UBE3B-211ENST00000539843 E2F6O75461 281 aa12.65□□□□□ -0.38
UBE3B-211ENST00000539843 PAHP00439 452 aa12.65□□□□□ -0.38
UBE3B-211ENST00000539843 CST1P01037 141 aa12.65□□□□□ -0.38
UBE3B-211ENST00000539843 HMGN1P05114 100 aa12.65□□□□□ -0.38
UBE3B-211ENST00000539843 FBP1P09467 338 aa12.65□□□□□ -0.38
UBE3B-211ENST00000539843 CALB2P22676 271 aa12.65□□□□□ -0.38
UBE3B-211ENST00000539843 POU1F1P28069 291 aa12.65□□□□□ -0.38
UBE3B-211ENST00000539843 RPS7P62081 194 aaKnown RBP12.65□□□□□ -0.38
UBE3B-211ENST00000539843 BLMHQ13867 455 aa12.65□□□□□ -0.38
UBE3B-211ENST00000539843 WDR38Q5JTN6 314 aa12.65□□□□□ -0.38
UBE3B-211ENST00000539843 WDR82Q6UXN9 313 aa12.65□□□□□ -0.38
UBE3B-211ENST00000539843 CD300LDQ6UXZ3 194 aa12.65□□□□□ -0.38
UBE3B-211ENST00000539843 VMO1Q7Z5L0 202 aa12.65□□□□□ -0.38
UBE3B-211ENST00000539843 LDLRAD3Q86YD5 345 aa12.65□□□□□ -0.38
UBE3B-211ENST00000539843 OR10Z1Q8NGY1 313 aa12.65□□□□□ -0.38
UBE3B-211ENST00000539843 FAM81AQ8TBF8 368 aa12.65□□□□□ -0.38
UBE3B-211ENST00000539843 THEM6Q8WUY1 208 aa12.65□□□□□ -0.38
UBE3B-211ENST00000539843 WFDC12Q8WWY7 111 aa12.65□□□□□ -0.38
UBE3B-211ENST00000539843 ASB9Q96DX5 294 aa12.65□□□□□ -0.38
UBE3B-211ENST00000539843 CCL13Q99616 98 aa12.65□□□□□ -0.38
UBE3B-211ENST00000539843 SIRPDQ9H106 197 aa12.65□□□□□ -0.38
UBE3B-211ENST00000539843 C1RLQ9NZP8 487 aa12.65□□□□□ -0.38
UBE3B-211ENST00000539843 CDIPTO14735 213 aa12.64□□□□□ -0.39
UBE3B-211ENST00000539843 PRODHO43272 600 aa12.64□□□□□ -0.39
UBE3B-211ENST00000539843 PSKH1P11801 424 aa12.64□□□□□ -0.39
UBE3B-211ENST00000539843 OPRL1P41146 370 aa12.64□□□□□ -0.39
UBE3B-211ENST00000539843 HOXA4Q00056 320 aaPredicted RBP12.64□□□□□ -0.39
UBE3B-211ENST00000539843 POU4F2Q12837 409 aa12.64□□□□□ -0.39
UBE3B-211ENST00000539843 IKZF1Q13422 519 aa12.64□□□□□ -0.39
UBE3B-211ENST00000539843 KLHL12Q53G59 568 aa12.64□□□□□ -0.39
UBE3B-211ENST00000539843 LINC01590Q5TEZ4 76 aa12.64□□□□□ -0.39
UBE3B-211ENST00000539843 H1FXQ92522 213 aaKnown RBP12.64□□□□□ -0.39
UBE3B-211ENST00000539843 UBE2FQ969M7 185 aa12.64□□□□□ -0.39
UBE3B-211ENST00000539843 CCDC124Q96CT7 223 aaKnown RBP12.64□□□□□ -0.39
UBE3B-211ENST00000539843 MED30Q96HR3 178 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms