RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 EMX1Q04741 257 aaPredicted RBP13.25□□□□□ -0.29
DDB1-216ENST00000539739 ADIPOQQ15848 244 aa13.25□□□□□ -0.29
DDB1-216ENST00000539739 ZNF181Q2M3W8 571 aa13.25□□□□□ -0.29
DDB1-216ENST00000539739 WDR38Q5JTN6 314 aa13.25□□□□□ -0.29
DDB1-216ENST00000539739 MBNL2Q5VZF2 373 aaKnown RBP13.25□□□□□ -0.29
DDB1-216ENST00000539739 FBXW12Q6X9E4 464 aa13.25□□□□□ -0.29
DDB1-216ENST00000539739 FBXL14Q8N1E6 418 aa13.25□□□□□ -0.29
DDB1-216ENST00000539739 OR13F1Q8NGS4 319 aa13.25□□□□□ -0.29
DDB1-216ENST00000539739 OR2AE1Q8NHA4 323 aa13.25□□□□□ -0.29
DDB1-216ENST00000539739 MRPL24Q96A35 216 aaKnown RBP13.25□□□□□ -0.29
DDB1-216ENST00000539739 RNF166Q96A37 237 aaPredicted RBP13.25□□□□□ -0.29
DDB1-216ENST00000539739 SGK3Q96BR1 496 aa13.25□□□□□ -0.29
DDB1-216ENST00000539739 CMBLQ96DG6 245 aa13.25□□□□□ -0.29
DDB1-216ENST00000539739 OR5M11Q96RB7 305 aa13.25□□□□□ -0.29
DDB1-216ENST00000539739 TRAF4Q9BUZ4 470 aaPredicted RBP13.25□□□□□ -0.29
DDB1-216ENST00000539739 COMMD4Q9H0A8 199 aa13.25□□□□□ -0.29
DDB1-216ENST00000539739 POFUT1Q9H488 388 aa13.25□□□□□ -0.29
DDB1-216ENST00000539739 PLK3Q9H4B4 646 aa13.25□□□□□ -0.29
DDB1-216ENST00000539739 UBTD1Q9HAC8 227 aa13.25□□□□□ -0.29
DDB1-216ENST00000539739 ACOT13Q9NPJ3 140 aa13.25□□□□□ -0.29
DDB1-216ENST00000539739 ZNF319Q9P2F9 582 aa13.25□□□□□ -0.29
DDB1-216ENST00000539739 DUSP13Q9UII6 198 aa13.25□□□□□ -0.29
DDB1-216ENST00000539739 LSM2Q9Y333 95 aaKnown RBP13.25□□□□□ -0.29
DDB1-216ENST00000539739 A0A1W2PPR1 153 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 TMEM212A6NML5 194 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 TTRP02766 147 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 UBCP0CG48 685 aaKnown RBP13.24□□□□□ -0.29
DDB1-216ENST00000539739 HSMCR30P0CW71 290 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 SELEP16581 610 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 SERPINF1P36955 418 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 KLF3P57682 345 aaPredicted RBP13.24□□□□□ -0.29
DDB1-216ENST00000539739 NANOS3P60323 173 aaKnown RBP13.24□□□□□ -0.29
DDB1-216ENST00000539739 ZNF92Q03936 586 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 ACSM1Q08AH1 577 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 GK2Q14410 553 aaPredicted RBP13.24□□□□□ -0.29
DDB1-216ENST00000539739 HLXQ14774 488 aaPredicted RBP13.24□□□□□ -0.29
DDB1-216ENST00000539739 CDK5R1Q15078 307 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 ODF4Q2M2E3 257 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 TMEM244Q5VVB8 128 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 ZNF367Q7RTV3 350 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 LINC00518Q8N0U6 118 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 PRSS35Q8N3Z0 413 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 ZNF676Q8N7Q3 588 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 OR51E1Q8TCB6 317 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 FCGR1BQ92637 280 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 PPP1R14AQ96A00 147 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 SPSB4Q96A44 273 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 REPIN1Q9BWE0 567 aaKnown RBP13.24□□□□□ -0.29
DDB1-216ENST00000539739 FZR1Q9UM11 496 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 C5orf63A6NC05 138 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 OGG1O15527 345 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 LALBAP00709 142 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 ANOS1P23352 680 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 DDOSTP39656 456 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 NR4A2P43354 598 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 KIR3DL2P43630 455 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 POLR2GP62487 172 aaKnown RBP eCLIP13.24□□□□□ -0.29
DDB1-216ENST00000539739 MRPS15P82914 257 aaKnown RBP13.24□□□□□ -0.29
DDB1-216ENST00000539739 GPR107Q5VW38 600 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 ZNF787Q6DD87 383 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 HIST2H2BCQ6DN03 193 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 MUC15Q8N387 334 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 ZNF611Q8N823 705 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 OR5AK2Q8NH90 309 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 HAVCR1Q96D42 359 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 ISYNA1Q9NPH2 558 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 GPR84Q9NQS5 396 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 ST6GALNAC2Q9UJ37 374 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 GPR160Q9UJ42 338 aa13.24□□□□□ -0.29
DDB1-216ENST00000539739 A0A1B0GVI7 797 aa13.23□□□□□ -0.29
DDB1-216ENST00000539739 GGT3PA6NGU5 568 aa13.23□□□□□ -0.29
DDB1-216ENST00000539739 OR4C45A6NMZ5 311 aa13.23□□□□□ -0.29
DDB1-216ENST00000539739 B9A039 149 aa13.23□□□□□ -0.29
DDB1-216ENST00000539739 P2RY10O00398 339 aa13.23□□□□□ -0.29
DDB1-216ENST00000539739 PCMT1P22061 227 aa13.23□□□□□ -0.29
DDB1-216ENST00000539739 MPV17P39210 176 aa13.23□□□□□ -0.29
DDB1-216ENST00000539739 EVX1P49640 407 aa13.23□□□□□ -0.29
DDB1-216ENST00000539739 SSTP61278 116 aa13.23□□□□□ -0.29
DDB1-216ENST00000539739 PSG7Q13046 419 aa13.23□□□□□ -0.29
DDB1-216ENST00000539739 IKZF1Q13422 519 aa13.23□□□□□ -0.29
DDB1-216ENST00000539739 AGAP6Q5VW22 663 aa13.23□□□□□ -0.29
DDB1-216ENST00000539739 XAF1Q6GPH4 301 aa13.23□□□□□ -0.29
DDB1-216ENST00000539739 SMIM19Q96E16 107 aa13.23□□□□□ -0.29
DDB1-216ENST00000539739 SYT3Q9BQG1 590 aa13.23□□□□□ -0.29
DDB1-216ENST00000539739 MRPL37Q9BZE1 423 aaKnown RBP13.23□□□□□ -0.29
DDB1-216ENST00000539739 IGLV3-9A0A075B6K5 115 aa13.22□□□□□ -0.29
DDB1-216ENST00000539739 PNMA8CA0A1B0GUJ8 204 aa13.22□□□□□ -0.29
DDB1-216ENST00000539739 SYT7O43581 403 aa13.22□□□□□ -0.29
DDB1-216ENST00000539739 TIMM8AO60220 97 aaPredicted RBP13.22□□□□□ -0.29
DDB1-216ENST00000539739 CCNKO75909 580 aa13.22□□□□□ -0.29
DDB1-216ENST00000539739 IGHV3-13P01766 116 aa13.22□□□□□ -0.29
DDB1-216ENST00000539739 ISG15P05161 165 aa13.22□□□□□ -0.29
DDB1-216ENST00000539739 CELP19835 753 aa13.22□□□□□ -0.29
DDB1-216ENST00000539739 KITLGP21583 273 aa13.22□□□□□ -0.29
DDB1-216ENST00000539739 PPP5CP53041 499 aa13.22□□□□□ -0.29
DDB1-216ENST00000539739 FAM3AP98173 230 aa13.22□□□□□ -0.29
DDB1-216ENST00000539739 SLC3A1Q07837 685 aa13.22□□□□□ -0.29
DDB1-216ENST00000539739 MLLT11Q13015 90 aaPredicted RBP13.22□□□□□ -0.29
DDB1-216ENST00000539739 MSMPQ1L6U9 139 aa13.22□□□□□ -0.29
DDB1-216ENST00000539739 YIF1BQ5BJH7 314 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms