RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 CARTPTQ16568 116 aa11.04□□□□□ -0.64
CHFR-216ENST00000538235 ZNF826PQ6ZT77 177 aa11.04□□□□□ -0.64
CHFR-216ENST00000538235 C11orf53Q8IXP5 236 aa11.04□□□□□ -0.64
CHFR-216ENST00000538235 ZFP41Q8N8Y5 198 aa11.04□□□□□ -0.64
CHFR-216ENST00000538235 OR13C5Q8NGS8 318 aa11.04□□□□□ -0.64
CHFR-216ENST00000538235 FAM168AQ92567 244 aa11.04□□□□□ -0.64
CHFR-216ENST00000538235 ITPKCQ96DU7 683 aa11.04□□□□□ -0.64
CHFR-216ENST00000538235 ZNF184Q99676 751 aaPredicted RBP11.04□□□□□ -0.64
CHFR-216ENST00000538235 GSX1Q9H4S2 264 aaPredicted RBP11.04□□□□□ -0.64
CHFR-216ENST00000538235 MOB1AQ9H8S9 216 aa11.04□□□□□ -0.64
CHFR-216ENST00000538235 GCM1Q9NP62 436 aa11.04□□□□□ -0.64
CHFR-216ENST00000538235 CNOT2Q9NZN8 540 aaKnown RBP11.04□□□□□ -0.64
CHFR-216ENST00000538235 MRPL15Q9P015 296 aaKnown RBP11.04□□□□□ -0.64
CHFR-216ENST00000538235 RAB26Q9ULW5 256 aa11.04□□□□□ -0.64
CHFR-216ENST00000538235 LSM2Q9Y333 95 aaKnown RBP11.04□□□□□ -0.64
CHFR-216ENST00000538235 IGHV1-69-2A0A0G2JMI3 117 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 LRP5LA4QPB2 252 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 ACOD1A6NK06 481 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 ZNF850A8MQ14 1090 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 SMAD7O15105 426 aaKnown RBP11.03□□□□□ -0.64
CHFR-216ENST00000538235 DHRS3O75911 302 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 ZFPL1O95159 310 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 MT-ND2P03891 347 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 CDK1P06493 297 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 BMP4P12644 408 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 EGR1P18146 543 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 CRHBPP24387 322 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 DCKP27707 260 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 CD200P41217 278 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 NR4A2P43354 598 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 PDLIM4P50479 330 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 PRDX4Q13162 271 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 BLMHQ13867 455 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 C11orf91Q3C1V1 193 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 PCGF3Q3KNV8 242 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 KLHL22Q53GT1 634 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 TMEM42Q69YG0 159 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 CRIP3Q6Q6R5 217 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 CLEC2AQ6UVW9 174 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 MOGAT3Q86VF5 341 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 KLBQ86Z14 1044 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 C19orf18Q8NEA5 215 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 OR13G1Q8NGZ3 307 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 RDH5Q92781 318 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 ADAT3Q96EY9 351 aaPredicted RBP11.03□□□□□ -0.64
CHFR-216ENST00000538235 TMEM80Q96HE8 168 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 OR5M11Q96RB7 305 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 PDCD1LG2Q9BQ51 273 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 PAPOLGQ9BWT3 736 aaKnown RBP11.03□□□□□ -0.64
CHFR-216ENST00000538235 REG4Q9BYZ8 158 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 VCX3BQ9H321 246 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 RGCCQ9H4X1 137 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 DUSP21Q9H596 190 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 OPA3Q9H6K4 179 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 INPP5EQ9NRR6 644 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 CYSLTR2Q9NS75 346 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 TMEM100Q9NV29 134 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 ZDHHC8Q9ULC8 765 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 PCDHGB1Q9Y5G3 927 aa11.03□□□□□ -0.64
CHFR-216ENST00000538235 NSD1Q96L73 2696 aaPredicted RBP11.02□□□□□ -0.64
CHFR-216ENST00000538235 SNTNA6NMZ2 147 aa11.02□□□□□ -0.65
CHFR-216ENST00000538235 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.02□□□□□ -0.65
CHFR-216ENST00000538235 FCN3O75636 299 aa11.02□□□□□ -0.65
CHFR-216ENST00000538235 ZNF205O95201 554 aa11.02□□□□□ -0.65
CHFR-216ENST00000538235 CYB5R3P00387 301 aaPredicted RBP11.02□□□□□ -0.65
CHFR-216ENST00000538235 CST4P01036 141 aa11.02□□□□□ -0.65
CHFR-216ENST00000538235 ACHEP22303 614 aa11.02□□□□□ -0.65
CHFR-216ENST00000538235 LIPAP38571 399 aa11.02□□□□□ -0.65
CHFR-216ENST00000538235 ACTA2P62736 377 aa11.02□□□□□ -0.65
CHFR-216ENST00000538235 ACTG2P63267 376 aa11.02□□□□□ -0.65
CHFR-216ENST00000538235 ALKBH1Q13686 389 aaKnown RBP11.02□□□□□ -0.65
CHFR-216ENST00000538235 CDK5R1Q15078 307 aa11.02□□□□□ -0.65
CHFR-216ENST00000538235 OR8G1Q15617 311 aa11.02□□□□□ -0.65
CHFR-216ENST00000538235 CEP78Q5JTW2 689 aa11.02□□□□□ -0.65
CHFR-216ENST00000538235 FAM220AQ7Z4H9 259 aa11.02□□□□□ -0.65
CHFR-216ENST00000538235 ORAI1Q96D31 301 aa11.02□□□□□ -0.65
CHFR-216ENST00000538235 PGLYRP3Q96LB9 341 aa11.02□□□□□ -0.65
CHFR-216ENST00000538235 NARFLQ9H6Q4 476 aa11.02□□□□□ -0.65
CHFR-216ENST00000538235 METTL17Q9H7H0 456 aaPredicted RBP11.02□□□□□ -0.65
CHFR-216ENST00000538235 CHODLQ9H9P2 273 aa11.02□□□□□ -0.65
CHFR-216ENST00000538235 GPR173Q9NS66 373 aa11.02□□□□□ -0.65
CHFR-216ENST00000538235 UFSP2Q9NUQ7 469 aa11.02□□□□□ -0.65
CHFR-216ENST00000538235 IL19Q9UHD0 177 aa11.02□□□□□ -0.65
CHFR-216ENST00000538235 PIGLQ9Y2B2 252 aa11.02□□□□□ -0.65
CHFR-216ENST00000538235 EXOSC1Q9Y3B2 195 aaKnown RBP11.02□□□□□ -0.65
CHFR-216ENST00000538235 FN1P02751 2386 aaKnown RBP11.01□□□□□ -0.65
CHFR-216ENST00000538235 IGKV1-27A0A075B6S5 117 aa11.01□□□□□ -0.65
CHFR-216ENST00000538235 LOC390937A0A1W2PQ73 354 aa11.01□□□□□ -0.65
CHFR-216ENST00000538235 EFCAB10A6NFE3 127 aa11.01□□□□□ -0.65
CHFR-216ENST00000538235 PTGES3LE9PB15 166 aa11.01□□□□□ -0.65
CHFR-216ENST00000538235 DENRO43583 198 aaKnown RBP11.01□□□□□ -0.65
CHFR-216ENST00000538235 GATA4P43694 442 aa11.01□□□□□ -0.65
CHFR-216ENST00000538235 HSPA13P48723 471 aa11.01□□□□□ -0.65
CHFR-216ENST00000538235 MRPS11P82912 194 aaKnown RBP11.01□□□□□ -0.65
CHFR-216ENST00000538235 ZNF154Q13106 437 aa11.01□□□□□ -0.65
CHFR-216ENST00000538235 DYNC1I2Q13409 638 aaKnown RBP11.01□□□□□ -0.65
CHFR-216ENST00000538235 ZMYND11Q15326 602 aa11.01□□□□□ -0.65
CHFR-216ENST00000538235 ZMAT1Q5H9K5 638 aa11.01□□□□□ -0.65
CHFR-216ENST00000538235 COMMD2Q86X83 199 aa11.01□□□□□ -0.65
CHFR-216ENST00000538235 LURAP1LQ8IV03 231 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms