RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 WDFY1Q8IWB7 410 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 OR8B12Q8NGG6 310 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 RHOXF1Q8NHV9 184 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 OTOSQ8NHW6 89 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 GCDHQ92947 438 aaPredicted RBP6.26□□□□□ -1.41
MSH6-209ENST00000538136 POP5Q969H6 163 aaKnown RBP6.26□□□□□ -1.41
MSH6-209ENST00000538136 COG8Q96MW5 612 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 MBOAT4Q96T53 435 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 PLEKHJ1Q9NW61 149 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 RNF150Q9ULK6 438 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 MUC22E2RYF6 1773 aaPredicted RBP6.26□□□□□ -1.41
MSH6-209ENST00000538136 ASH1LQ9NR48 2969 aaKnown RBP6.26□□□□□ -1.41
MSH6-209ENST00000538136 ZAR1LA6NP61 321 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 CEACAM4O75871 244 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 OR2T7P0C7T2 308 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 SDC2P34741 201 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 GNG10P50151 68 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 ADARB1P78563 741 aaKnown RBP6.26□□□□□ -1.41
MSH6-209ENST00000538136 PYDC2Q56P42 97 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 WDR38Q5JTN6 314 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 OGFRL1Q5TC84 451 aaPredicted RBP6.26□□□□□ -1.41
MSH6-209ENST00000538136 TMEM244Q5VVB8 128 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 IGF2-ASQ6U949 168 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 FIP1L1Q6UN15 594 aaKnown RBP6.26□□□□□ -1.41
MSH6-209ENST00000538136 SIAH3Q8IW03 269 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 OR51A2Q8NGJ7 313 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 OR2T27Q8NH04 317 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 OR4K15Q8NH41 348 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 FNDC8Q8TC99 324 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 NAA50Q9GZZ1 169 aaKnown RBP6.26□□□□□ -1.41
MSH6-209ENST00000538136 ABCB10Q9NRK6 738 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 TRAPPC2LQ9UL33 140 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 PCDHGB1Q9Y5G3 927 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 PEX16Q9Y5Y5 336 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 TRAV18A0A075B6X5 111 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 IGHG3P01860 377 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 IFNA6P05013 189 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 RPS4Y1P22090 263 aaKnown RBP6.26□□□□□ -1.41
MSH6-209ENST00000538136 HTR1FP30939 366 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 ACTA2P62736 377 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 ACTG2P63267 376 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 PRDX4Q13162 271 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 BCL2A1Q16548 175 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 MICBQ29980 383 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 PAN3Q58A45 887 aaKnown RBP6.26□□□□□ -1.41
MSH6-209ENST00000538136 ZBTB8BQ8NAP8 495 aaPredicted RBP6.26□□□□□ -1.41
MSH6-209ENST00000538136 TFAP2CQ92754 450 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 MRPL37Q9BZE1 423 aaKnown RBP6.26□□□□□ -1.41
MSH6-209ENST00000538136 MS4A5Q9H3V2 200 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 ANKRD19PQ9H560 264 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 MRPL22Q9NWU5 206 aaKnown RBP6.26□□□□□ -1.41
MSH6-209ENST00000538136 ERVK13-1Q9NX77 482 aa6.26□□□□□ -1.41
MSH6-209ENST00000538136 LOC100289279A0A1B0GTE1 492 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 ZFPL1O95159 310 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 SNRPBP14678 240 aaKnown RBP6.25□□□□□ -1.41
MSH6-209ENST00000538136 TIMP3P35625 211 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 ZNF93P35789 620 aaPredicted RBP6.25□□□□□ -1.41
MSH6-209ENST00000538136 ATP1B3P54709 279 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 TIMM23BQ5SRD1 257 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 PCSK4Q6UW60 755 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 FOXRED2Q8IWF2 684 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 OR2G2Q8NGZ5 317 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 NINJ1Q92982 152 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 KCNK17Q96T54 332 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 PRDM14Q9GZV8 571 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 WNT5BQ9H1J7 359 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 CLCF1Q9UBD9 225 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 KCNN3Q9UGI6 736 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 LHFPL6Q9Y693 200 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 FAM25EA8MYX2 175 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 PNPP00491 289 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 ADRA2CP18825 462 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 MRPS34P82930 218 aaKnown RBP6.25□□□□□ -1.41
MSH6-209ENST00000538136 ALKBH1Q13686 389 aaKnown RBP6.25□□□□□ -1.41
MSH6-209ENST00000538136 GK2Q14410 553 aaPredicted RBP6.25□□□□□ -1.41
MSH6-209ENST00000538136 TMEM44Q2T9K0 475 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 NLRC3Q7RTR2 1065 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 OR10V1Q8NGI7 309 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 TBC1D15Q8TC07 691 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 KCTD7Q96MP8 289 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 GINS4Q9BRT9 223 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 BARX1Q9HBU1 254 aaPredicted RBP6.25□□□□□ -1.41
MSH6-209ENST00000538136 GFOD1Q9NXC2 390 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 SPATA2Q9UM82 520 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 EXOSC1Q9Y3B2 195 aaKnown RBP6.25□□□□□ -1.41
MSH6-209ENST00000538136 IGHV2OR16-5A0A0B4J2B6 119 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 A0A1W2PP11 408 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 ZNF503-AS2A6NEH8 195 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 ZNF879B4DU55 563 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 ARPC3O15145 178 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 SLC16A6O15403 523 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 HPXP02790 462 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 SELLP14151 372 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 TNFRSF1AP19438 455 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 GRK5P34947 590 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 FXYD6P3P58550 94 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 SPATS1Q496A3 300 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 RIPPLY2Q5TAB7 128 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 GLT8D1Q68CQ7 371 aa6.25□□□□□ -1.41
MSH6-209ENST00000538136 ZDHHC23Q8IYP9 409 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms