RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 ZNF774Q6NX45 483 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 UXS1Q8NBZ7 420 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 ZNF845Q96IR2 970 aaPredicted RBP13.71□□□□□ -0.21
MKS1-204ENST00000537529 FOXB1Q99853 325 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 TMPRSS13Q9BYE2 586 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 CLEC4MQ9H2X3 399 aaPredicted RBP13.71□□□□□ -0.21
MKS1-204ENST00000537529 BANF2Q9H503 90 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 GPR35Q9HC97 309 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 ZNF224Q9NZL3 707 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 WDR87Q6ZQQ6 2873 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 DHRS7CA6NNS2 312 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 CXADRP78310 365 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 UBE2V2Q15819 145 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 CEACAM16Q2WEN9 425 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 SNAI3Q3KNW1 292 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 SLC22A6Q4U2R8 563 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 TEX261Q6UWH6 196 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 GVQW1Q8N7I0 195 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 OR13C8Q8NGS7 320 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 NPRL2Q8WTW4 380 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 HEXA-AS1Q9H8Q6 139 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 TIMM10BQ9Y5J6 103 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 U3KQ87 197 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 ANKRD34BA5PLL1 514 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 OR14I1A6ND48 311 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 OR6C6A6NF89 314 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 STMND1H3BQB6 276 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 RGS11O94810 467 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 ZNF35P13682 527 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 ZNF32P17041 273 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 SSTR2P30874 369 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 RPS27AP62979 156 aaKnown RBP13.7□□□□□ -0.22
MKS1-204ENST00000537529 C6orf183Q5T699 404 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 C11orf88Q6PI97 169 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 CD163Q86VB7 1156 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 C12orf45Q8N5I9 185 aaPredicted RBP13.7□□□□□ -0.22
MKS1-204ENST00000537529 ZDHHC22Q8N966 263 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 SEMA6DQ8NFY4 1073 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 ABHD3Q8WU67 409 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 SGK3Q96BR1 496 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 OPN4Q9UHM6 478 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 ANAPC10Q9UM13 185 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 KCNK7Q9Y2U2 307 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 A0A0C4DFX4 3053 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 IGKV3D-15A0A087WSY6 115 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 SOCS1O15524 211 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 IFNA6P05013 189 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 NAT2P11245 290 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 FCGR2AP12318 317 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 HRH1P35367 487 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 HTR5AP47898 357 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 LHX2P50458 406 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 UBE2MP61081 183 aaKnown RBP13.7□□□□□ -0.22
MKS1-204ENST00000537529 ACTBL2Q562R1 376 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 PLAC9Q5JTB6 97 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 OR52W1Q6IF63 320 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 SLC16A14Q7RTX9 510 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 SULF2Q8IWU5 870 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 STEAP2Q8NFT2 490 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 HAS2Q92819 552 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 REEP6Q96HR9 211 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 FER1L6-AS2Q96M78 137 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 S100A13Q99584 98 aa13.7□□□□□ -0.22
MKS1-204ENST00000537529 NCKAP5O14513 1909 aa13.69□□□□□ -0.22
MKS1-204ENST00000537529 PLSCR5A0PG75 271 aa13.69□□□□□ -0.22
MKS1-204ENST00000537529 ERVH48-1M5A8F1 160 aa13.69□□□□□ -0.22
MKS1-204ENST00000537529 SYNGR4O95473 234 aa13.69□□□□□ -0.22
MKS1-204ENST00000537529 SIX6O95475 246 aa13.69□□□□□ -0.22
MKS1-204ENST00000537529 RFC3P40938 356 aa13.69□□□□□ -0.22
MKS1-204ENST00000537529 CBX5P45973 191 aa13.69□□□□□ -0.22
MKS1-204ENST00000537529 H2BFSP57053 126 aa13.69□□□□□ -0.22
MKS1-204ENST00000537529 C2orf68Q2NKX9 166 aa13.69□□□□□ -0.22
MKS1-204ENST00000537529 KRTAP27-1Q3LI81 207 aa13.69□□□□□ -0.22
MKS1-204ENST00000537529 SFRP5Q5T4F7 317 aa13.69□□□□□ -0.22
MKS1-204ENST00000537529 LINC00696Q6ZRV3 163 aa13.69□□□□□ -0.22
MKS1-204ENST00000537529 ZNF680Q8NEM1 530 aa13.69□□□□□ -0.22
MKS1-204ENST00000537529 OR51T1Q8NGJ9 327 aa13.69□□□□□ -0.22
MKS1-204ENST00000537529 OR5D18Q8NGL1 313 aa13.69□□□□□ -0.22
MKS1-204ENST00000537529 CPNE2Q96FN4 548 aaPredicted RBP13.69□□□□□ -0.22
MKS1-204ENST00000537529 HES7Q9BYE0 225 aa13.69□□□□□ -0.22
MKS1-204ENST00000537529 TTTY12Q9BZ98 90 aa13.69□□□□□ -0.22
MKS1-204ENST00000537529 OR2H1Q9GZK4 316 aa13.69□□□□□ -0.22
MKS1-204ENST00000537529 B3GNT2Q9NY97 397 aa13.69□□□□□ -0.22
MKS1-204ENST00000537529 IL17BQ9UHF5 180 aa13.69□□□□□ -0.22
MKS1-204ENST00000537529 ZNF391Q9UJN7 358 aa13.69□□□□□ -0.22
MKS1-204ENST00000537529 VSIG4Q9Y279 399 aa13.69□□□□□ -0.22
MKS1-204ENST00000537529 NOSIPQ9Y314 301 aaKnown RBP13.69□□□□□ -0.22
MKS1-204ENST00000537529 A0A1W2PP11 408 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 MFNGO00587 321 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 SLC22A5O76082 557 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 FARS2O95363 451 aaKnown RBP13.68□□□□□ -0.22
MKS1-204ENST00000537529 IFNA7P01567 189 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 LCATP04180 440 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 MGMTP16455 207 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 ZNF24P17028 368 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 NAT1P18440 290 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 PLGLB1Q02325 96 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 RIPPLY1Q0D2K3 151 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 CRIP3Q6Q6R5 217 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 RTN4RL2Q86UN3 420 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms