RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 HLA-GP17693 338 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 POU3F2P20265 443 aaPredicted RBP8.14□□□□□ -1.11
UBE3B-207ENST00000537063 HGFACQ04756 655 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 SNAI3Q3KNW1 292 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 DCAF12L2Q5VW00 463 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 ZNF101Q8IZC7 436 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 SELENOIQ9C0D9 397 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 CRLF2Q9HC73 371 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 F5H5K5 113 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 SGCEO43556 437 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 FCER2P06734 321 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 DBHP09172 617 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 ZNF35P13682 527 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 ZBTB25P24278 435 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 GDF1P27539 372 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 DLSTP36957 453 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 PTGFRP43088 359 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 SCRN3Q0VDG4 424 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 GK2Q14410 553 aaPredicted RBP8.14□□□□□ -1.11
UBE3B-207ENST00000537063 SLC22A6Q4U2R8 563 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 VAX1Q5SQQ9 334 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 AAED1Q7RTV5 226 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 OR56B1Q8NGI3 324 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 SLC39A7Q92504 469 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 HAS2Q92819 552 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 SGK3Q96BR1 496 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 RAB3CQ96E17 227 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 OR10A2Q9H208 303 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 PLEK2Q9NYT0 353 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 LRFN1Q9P244 771 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 PLEKHA6Q9Y2H5 1048 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 MCRIP1C9JLW8 97 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 GOSR2O14653 212 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 SOCS1O15524 211 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 CA11O75493 328 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 MTRF1O75570 445 aaKnown RBP8.14□□□□□ -1.11
UBE3B-207ENST00000537063 RAD51DO75771 328 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 TOXO94900 526 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 MT-CO3P00414 261 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 CD8AP01732 235 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 SSTR2P30874 369 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 STARP49675 285 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 LHX2P50458 406 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 DHRS2Q13268 280 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 GRK1Q15835 563 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 HYAL4Q2M3T9 481 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 C4orf46Q504U0 113 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 LPCAT3Q6P1A2 487 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 CHMP1BQ7LBR1 199 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 SULF2Q8IWU5 870 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 C12orf45Q8N5I9 185 aaPredicted RBP8.14□□□□□ -1.11
UBE3B-207ENST00000537063 OR1F12Q8NHA8 337 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 ROBO4Q8WZ75 1007 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 GPR35Q9HC97 309 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 CDK2AP1O14519 115 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 MPIG6BO95866 241 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 FAHP16930 419 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 HRH1P35367 487 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 SLC6A9P48067 706 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 EXOSC2Q13868 293 aaKnown RBP8.13□□□□□ -1.11
UBE3B-207ENST00000537063 GFOD2Q3B7J2 385 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 ACTBL2Q562R1 376 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 TMEM42Q69YG0 159 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 OR52W1Q6IF63 320 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 ZNF100Q8IYN0 542 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 PNLDC1Q8NA58 520 aaKnown RBP8.13□□□□□ -1.11
UBE3B-207ENST00000537063 CHST4Q8NCG5 386 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 ST8SIA4Q92187 359 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 SIGLEC12Q96PQ1 595 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 LINC00470Q9BZP3 86 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 FN3KRPQ9HA64 309 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 IFT46Q9NQC8 304 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 ATPIF1Q9UII2 106 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 ZNF391Q9UJN7 358 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 PIGLQ9Y2B2 252 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 A0A1W2PP11 408 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 TUBAL3A6NHL2 446 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 TSC22D2O75157 780 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 IFNA7P01567 189 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 C4BPBP20851 252 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 NFYAP23511 347 aaPredicted RBP8.13□□□□□ -1.11
UBE3B-207ENST00000537063 CBX5P45973 191 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 CLDN18P56856 261 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 UBE2MP61081 183 aaKnown RBP8.13□□□□□ -1.11
UBE3B-207ENST00000537063 SEC61A1P61619 476 aaKnown RBP8.13□□□□□ -1.11
UBE3B-207ENST00000537063 OPCMLQ14982 345 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 DCAF10Q5QP82 559 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 CLVS2Q5SYC1 327 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 SPINK14Q6IE38 97 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 C1QL2Q7Z5L3 287 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 HOGA1Q86XE5 327 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 OR5M8Q8NGP6 311 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 TNFAIP8L1Q8WVP5 186 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 CDC6Q99741 560 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 FOXB1Q99853 325 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 URM1Q9BTM9 101 aaKnown RBP8.13□□□□□ -1.11
UBE3B-207ENST00000537063 CST11Q9H112 138 aa8.13□□□□□ -1.11
UBE3B-207ENST00000537063 OR2AT4A6NND4 320 aa8.12□□□□□ -1.11
UBE3B-207ENST00000537063 SIX6O95475 246 aa8.12□□□□□ -1.11
UBE3B-207ENST00000537063 MMP7P09237 267 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms