RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 OR9A2Q8NGT5 310 aa3.25□□□□□ -1.89
PRKDC-208ENST00000536710 CIRBP-AS1Q8TBR5 109 aa3.25□□□□□ -1.89
PRKDC-208ENST00000536710 DCAKDQ8WVC6 231 aa3.25□□□□□ -1.89
PRKDC-208ENST00000536710 RNF170Q96K19 258 aa3.25□□□□□ -1.89
PRKDC-208ENST00000536710 KCNS1Q96KK3 526 aa3.25□□□□□ -1.89
PRKDC-208ENST00000536710 RDH12Q96NR8 316 aa3.25□□□□□ -1.89
PRKDC-208ENST00000536710 TM6SF2Q9BZW4 377 aa3.25□□□□□ -1.89
PRKDC-208ENST00000536710 ZNF442Q9H7R0 627 aa3.25□□□□□ -1.89
PRKDC-208ENST00000536710 RBFOX1Q9NWB1 397 aaKnown RBP3.25□□□□□ -1.89
PRKDC-208ENST00000536710 ZNF257Q9Y2Q1 563 aa3.25□□□□□ -1.89
PRKDC-208ENST00000536710 TNS2Q63HR2 1409 aa3.25□□□□□ -1.89
PRKDC-208ENST00000536710 LRP4O75096 1905 aa3.25□□□□□ -1.89
PRKDC-208ENST00000536710 SYNRGQ9UMZ2 1314 aa3.24□□□□□ -1.89
PRKDC-208ENST00000536710 A0A0B4J2E0 115 aa3.24□□□□□ -1.89
PRKDC-208ENST00000536710 TMEM150BA6NC51 233 aa3.24□□□□□ -1.89
PRKDC-208ENST00000536710 KDELR3O43731 214 aa3.24□□□□□ -1.89
PRKDC-208ENST00000536710 TTC4O95801 387 aa3.24□□□□□ -1.89
PRKDC-208ENST00000536710 CCNE2O96020 404 aa3.24□□□□□ -1.89
PRKDC-208ENST00000536710 MT-ND4P03905 459 aa3.24□□□□□ -1.89
PRKDC-208ENST00000536710 CCDC172P0C7W6 258 aa3.24□□□□□ -1.89
PRKDC-208ENST00000536710 TAS2R39P59534 338 aa3.24□□□□□ -1.89
PRKDC-208ENST00000536710 SLC35B1P78383 322 aa3.24□□□□□ -1.89
PRKDC-208ENST00000536710 RPL18AQ02543 176 aaKnown RBP3.24□□□□□ -1.89
PRKDC-208ENST00000536710 YIF1BQ5BJH7 314 aa3.24□□□□□ -1.89
PRKDC-208ENST00000536710 RNASE13Q5GAN3 156 aaKnown RBP3.24□□□□□ -1.89
PRKDC-208ENST00000536710 SHISA6Q6ZSJ9 500 aa3.24□□□□□ -1.89
PRKDC-208ENST00000536710 DOK1Q99704 481 aa3.24□□□□□ -1.89
PRKDC-208ENST00000536710 GABRG3Q99928 467 aa3.24□□□□□ -1.89
PRKDC-208ENST00000536710 TMEM175Q9BSA9 504 aa3.24□□□□□ -1.89
PRKDC-208ENST00000536710 EMC6Q9BV81 110 aa3.24□□□□□ -1.89
PRKDC-208ENST00000536710 CHID1Q9BWS9 393 aa3.24□□□□□ -1.89
PRKDC-208ENST00000536710 EXOSC4Q9NPD3 245 aaKnown RBP3.24□□□□□ -1.89
PRKDC-208ENST00000536710 TMEM100Q9NV29 134 aa3.24□□□□□ -1.89
PRKDC-208ENST00000536710 NDRG2Q9UN36 371 aaKnown RBP3.24□□□□□ -1.89
PRKDC-208ENST00000536710 IGHV7-4-1A0A0J9YVY3 117 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 BOLA2-SMG1P6H3BVE0 249 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 M0R1X1 148 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 MANBAO00462 879 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 MYL12BO14950 172 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 UPK1BO75841 260 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 GATBO75879 557 aaKnown RBP3.23□□□□□ -1.89
PRKDC-208ENST00000536710 SMC2O95347 1197 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 IGLV3-25P01717 112 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 SLC35A1P78382 337 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 ST3GAL4Q11206 333 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 CDC20Q12834 499 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 COX19Q49B96 90 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 C6orf99Q4VX62 202 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 TET2Q6N021 2002 aaPredicted RBP3.23□□□□□ -1.89
PRKDC-208ENST00000536710 GUSBP11Q6P575 273 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 ASCL4Q6XD76 172 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 FAM58AQ8N1B3 248 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 LINC00469Q8N7U9 141 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 OR13G1Q8NGZ3 307 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 OR1S1Q8NH92 325 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 SLC25A46Q96AG3 418 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 CENPNQ96H22 339 aaPredicted RBP3.23□□□□□ -1.89
PRKDC-208ENST00000536710 LINC00477Q96M19 166 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 Q96MT0 163 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 OR4K3Q96R72 315 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 SPIN2AQ99865 258 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 RNF5Q99942 180 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 SPIN2BQ9BPZ2 258 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 SIKE1Q9BRV8 207 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 ARV1Q9H2C2 271 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 TREX1Q9NSU2 369 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 OPN4Q9UHM6 478 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 GGA2Q9UJY4 613 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 FARSAQ9Y285 508 aaKnown RBP3.23□□□□□ -1.89
PRKDC-208ENST00000536710 SBNO1A3KN83 1393 aa3.23□□□□□ -1.89
PRKDC-208ENST00000536710 PTPRTO14522 1441 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 A0A0A6YYD5 115 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 IGHV3-72A0A0B4J1Y9 119 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 H7C2Y5 167 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 NDUFS8O00217 210 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 MPZL1O95297 269 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 TRBV12-3P01733 135 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 IL4P05112 153 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 S100A9P06702 114 aaKnown RBP3.22□□□□□ -1.89
PRKDC-208ENST00000536710 TPM1P09493 284 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 HCCSP53701 268 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 DMC1Q14565 340 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 SLC25A35Q3KQZ1 300 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 TEX30Q5JUR7 227 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 CPTPQ5TA50 214 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 DUPD1Q68J44 220 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 ZNF880Q6PDB4 577 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 BHLHA15Q7RTS1 189 aaPredicted RBP3.22□□□□□ -1.89
PRKDC-208ENST00000536710 DAW1Q8N136 415 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 PDCL2Q8N4E4 241 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 NECAP1Q8NC96 275 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 OR4M1Q8NGD0 313 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 OR10Z1Q8NGY1 313 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 TMEM234Q8WY98 164 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 ESR2Q92731 530 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 SULT4A1Q9BR01 284 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 NUDT9Q9BW91 350 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 SFXN3Q9BWM7 321 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 SIGLEC7Q9Y286 467 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 ZNF835Q9Y2P0 537 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms