RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 DOK2O60496 412 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 VSIG10L2P0DP72 767 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 CXCL2P19875 107 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 HTR2CP28335 458 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 C1orf100Q5SVJ3 147 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 ZNF704Q6ZNC4 412 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 OVCH2Q7RTZ1 564 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 CDH26Q8IXH8 852 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 TMEM229BQ8NBD8 167 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 OR9K2Q8NGE7 335 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 ASB13Q8WXK3 278 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 WDYHV1Q96HA8 205 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 OXGR1Q96P68 337 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 CHIAQ9BZP6 476 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 SLCO5A1Q9H2Y9 848 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 SCPEP1Q9HB40 452 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 CA10Q9NS85 328 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 ZNF69Q9UC07 566 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 SESN1Q9Y6P5 492 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 ZNF716A6NP11 495 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 NPIPA2E9PIF3 369 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 NPIPA3F8WFD2 350 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 LINC01387J3KSC0 135 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 L7N2F9 121 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 EIF1BO60739 113 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 RGS11O94810 467 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 KDM4BO94953 1096 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 ACTL6AO96019 429 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 ZNF823P16415 610 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 ZNF43P17038 809 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 NTF4P34130 210 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 NUP62P37198 522 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 CAPZA1P52907 286 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 CLDN17P56750 224 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 ACTBP60709 375 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 ACTG1P63261 375 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 MPPED2Q15777 294 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 TMEM244Q5VVB8 128 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 CPNE4Q96A23 557 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 ELMOD3Q96FG2 381 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 GINS4Q9BRT9 223 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 OR52A1Q9UKL2 312 aa11.37□□□□□ -0.59
CDK5RAP3-202ENST00000536708 UBE2QL1A1L167 161 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 HMSDA8MTL9 139 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 ATP6V1G2-DDX39BF2Z307 99 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 MPZL1O95297 269 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 GTF2F2P13984 249 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 MMP16P51512 607 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 STEAP1BQ6NZ63 245 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 ZIC4Q8N9L1 334 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 PLPP7Q8NBV4 271 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 OR5M9Q8NGP3 310 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 RNF133Q8WVZ7 376 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 ST8SIA4Q92187 359 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 FOXRED1Q96CU9 486 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 SLC25A44Q96H78 314 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 CXorf58Q96LI9 332 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 ATG5Q9H1Y0 275 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 C1orf198Q9H425 327 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 MYOZ1Q9NP98 299 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 TAS2R4Q9NYW5 299 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 RHBDD3Q9Y3P4 386 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 H3BSH0 61 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 DNPH1O43598 174 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 B3GALNT1O75752 331 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 LPLP06858 475 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 UBCP0CG48 685 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 PGA4P0DJD7 388 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 PGA3P0DJD8 388 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 TAS2R19P59542 299 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 GUCA2AQ02747 115 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 RGS7BPQ6MZT1 257 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 DCXRQ7Z4W1 244 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 NKAIN3Q8N8D7 197 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 NOXO1Q8NFA2 376 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 PNPLA2Q96AD5 504 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 SEH1LQ96EE3 360 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 NAA11Q9BSU3 229 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 C1QTNF6Q9BXI9 259 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 PLSCR2Q9NRY7 297 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 FLVCR1Q9Y5Y0 555 aa11.36□□□□□ -0.59
CDK5RAP3-202ENST00000536708 EPG5Q9HCE0 2579 aa11.35□□□□□ -0.59
CDK5RAP3-202ENST00000536708 NBASA2RRP1 2371 aa11.35□□□□□ -0.59
CDK5RAP3-202ENST00000536708 INTS1Q8N201 2190 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-202ENST00000536708 NCOA6Q14686 2063 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-202ENST00000536708 ZFYVE26Q68DK2 2539 aa11.35□□□□□ -0.59
CDK5RAP3-202ENST00000536708 LOC107986453A0A1B0GWG9 222 aa11.35□□□□□ -0.59
CDK5RAP3-202ENST00000536708 MCRIP1C9JLW8 97 aa11.35□□□□□ -0.59
CDK5RAP3-202ENST00000536708 RAB6AP20340 208 aa11.35□□□□□ -0.59
CDK5RAP3-202ENST00000536708 NFYAP23511 347 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-202ENST00000536708 PHYHD1Q5SRE7 291 aa11.35□□□□□ -0.59
CDK5RAP3-202ENST00000536708 GLYATL3Q5SZD4 288 aa11.35□□□□□ -0.59
CDK5RAP3-202ENST00000536708 ADGRE4PQ86SQ3 457 aa11.35□□□□□ -0.59
CDK5RAP3-202ENST00000536708 GABRG1Q8N1C3 465 aa11.35□□□□□ -0.59
CDK5RAP3-202ENST00000536708 OR4D10Q8NGI6 311 aa11.35□□□□□ -0.59
CDK5RAP3-202ENST00000536708 OPN4Q9UHM6 478 aa11.35□□□□□ -0.59
CDK5RAP3-202ENST00000536708 GTF2A1LQ9UNN4 478 aa11.35□□□□□ -0.59
CDK5RAP3-202ENST00000536708 EMC9Q9Y3B6 208 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms