RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 ARMCX4Q5H9R4 360 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 DCST2Q5T1A1 773 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 HHATQ5VTY9 493 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 SAXO2Q658L1 398 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 CCBE1Q6UXH8 406 aaPredicted RBP4.15□□□□□ -1.75
CLIP1-207ENST00000536634 C3orf62Q6ZUJ4 267 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 C5orf24Q7Z6I8 188 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 NRARPQ7Z6K4 114 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 MDP1Q86V88 176 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 KLHL7Q8IXQ5 586 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 OR9K2Q8NGE7 335 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 OR10G7Q8NGN6 311 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 MRAPQ8TCY5 172 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 NPRL2Q8WTW4 380 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 ST8SIA1Q92185 356 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 NSMAFQ92636 917 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 RAB39BQ96DA2 213 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 ZHX1-C8orf76Q96EF9 292 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 TSPAN32Q96QS1 320 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 ZNF416Q9BWM5 594 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 RSPO3Q9BXY4 272 aaPredicted RBP4.15□□□□□ -1.75
CLIP1-207ENST00000536634 CRLF2Q9HC73 371 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 ACER3Q9NUN7 267 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 CHRNA9Q9UGM1 479 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 LEF1Q9UJU2 399 aaPredicted RBP4.15□□□□□ -1.75
CLIP1-207ENST00000536634 SNX24Q9Y343 169 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 HDGFL3Q9Y3E1 203 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 TIMM22Q9Y584 194 aa4.15□□□□□ -1.75
CLIP1-207ENST00000536634 V9GYY5 206 aaPredicted RBP4.15□□□□□ -1.75
CLIP1-207ENST00000536634 TANC2Q9HCD6 1990 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 TET2Q6N021 2002 aaPredicted RBP4.14□□□□□ -1.75
CLIP1-207ENST00000536634 DOCK11Q5JSL3 2073 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 IGHV3-38A0A0C4DH36 116 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 A0A1B0GUS0 222 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 TMEM72A0PK05 275 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 CLPSL1A2RUU4 121 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 TRAPPC2LH3BP13 241 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 CCDC188H7C350 402 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 TRAF3IP2O43734 574 aaPredicted RBP4.14□□□□□ -1.75
CLIP1-207ENST00000536634 SMIM24O75264 130 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 HSPA4LO95757 839 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 KRT6AP02538 564 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 KRT6BP04259 564 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 CBR1P16152 277 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 ATP6V1C1P21283 382 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 HMOX2P30519 316 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 FRKP42685 505 aaPredicted RBP4.14□□□□□ -1.75
CLIP1-207ENST00000536634 KRT6CP48668 564 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 P2RY4P51582 365 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 RAD23AP54725 363 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 CCL8P80075 99 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 DR1Q01658 176 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 ZNF154Q13106 437 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 ZNF273Q14593 569 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 MAPK14Q16539 360 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 TAF9Q16594 264 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 MS4A18Q3C1V0 323 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 FAM106AQ4KMX7 169 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 UNC50Q53HI1 259 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 FGD3Q5JSP0 725 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 TEX35Q5T0J7 233 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 EMBQ6PCB8 327 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 ZCCHC12Q6PEW1 402 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 CYS1Q717R9 158 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 AAED1Q7RTV5 226 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 HMGN2P46Q86SG4 172 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 OR8H2Q8N162 312 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 TMEM99Q8N816 258 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 FAM71CQ8NEG0 241 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 OR5D16Q8NGK9 328 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 OR4F5Q8NH21 305 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 MAGEE2Q8TD90 523 aaPredicted RBP4.14□□□□□ -1.75
CLIP1-207ENST00000536634 RAB8BQ92930 207 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 POP5Q969H6 163 aaKnown RBP4.14□□□□□ -1.75
CLIP1-207ENST00000536634 CHMP6Q96FZ7 201 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 TMEM237Q96Q45 408 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 ZNF382Q96SR6 550 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 STACQ99469 402 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 GPA33Q99795 319 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 PIGUQ9H490 435 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 TUBB1Q9H4B7 451 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 BEX1Q9HBH7 125 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 GPN1Q9HCN4 374 aaPredicted RBP4.14□□□□□ -1.75
CLIP1-207ENST00000536634 TNFRSF19Q9NS68 423 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 TRAPPC4Q9Y296 219 aa4.14□□□□□ -1.75
CLIP1-207ENST00000536634 IGLV4-3A0A075B6K6 122 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 IGHV1-69-2A0A0G2JMI3 117 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 CLDN24A6NM45 220 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 A8MVM7 634 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 H0YL77 283 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 FCMRO60667 390 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 UGT2B17O75795 530 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 AKR7A3O95154 331 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 NDUFA7O95182 113 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 CSTAP01040 98 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 RBP1P09455 135 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 ZNF35P13682 527 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 FOLR2P14207 255 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 GLRXP35754 106 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 MAGEA12P43365 314 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms