RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 LRRC18Q8N456 261 aa11.59□□□□□ -0.55
LDLR-203ENST00000535915 KCNRGQ8N5I3 272 aa11.59□□□□□ -0.55
LDLR-203ENST00000535915 OR14K1Q8NGZ2 314 aa11.59□□□□□ -0.55
LDLR-203ENST00000535915 NPRL2Q8WTW4 380 aa11.59□□□□□ -0.55
LDLR-203ENST00000535915 FAHD2AQ96GK7 314 aa11.59□□□□□ -0.55
LDLR-203ENST00000535915 VRK1Q99986 396 aaPredicted RBP11.59□□□□□ -0.55
LDLR-203ENST00000535915 NELFAQ9H3P2 528 aa11.59□□□□□ -0.55
LDLR-203ENST00000535915 LDAHQ9H6V9 325 aa11.59□□□□□ -0.55
LDLR-203ENST00000535915 FN3KRPQ9HA64 309 aa11.59□□□□□ -0.55
LDLR-203ENST00000535915 ZNF160Q9HCG1 818 aa11.59□□□□□ -0.55
LDLR-203ENST00000535915 IGKV1-9A0A0C4DH69 117 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 C5orf63A6NC05 138 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 NPIPA2E9PIF3 369 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 NPIPA3F8WFD2 350 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 OR2F2O95006 317 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 UMODP07911 640 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 SLC25A4P12235 298 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 HLA-GP17693 338 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 DLSTP36957 453 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 TMEM50BP56557 158 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 LSM6P62312 80 aaKnown RBP11.58□□□□□ -0.56
LDLR-203ENST00000535915 H3F3AP84243 136 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 OR2F1Q13607 317 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 ZNF345Q14585 488 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 PHYHD1Q5SRE7 291 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 JMJD6Q6NYC1 403 aaPredicted RBP11.58□□□□□ -0.56
LDLR-203ENST00000535915 OR56B1Q8NGI3 324 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 OR5D18Q8NGL1 313 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 LIN37Q96GY3 246 aaPredicted RBP11.58□□□□□ -0.56
LDLR-203ENST00000535915 ARHGAP5-AS1Q96IT6 56 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 URM1Q9BTM9 101 aaKnown RBP11.58□□□□□ -0.56
LDLR-203ENST00000535915 PRELID3BQ9Y3B1 194 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 FREM2Q5SZK8 3169 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 TMEM265A0A087WTH1 108 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 EEF1E1-BLOC1S5C9J1V9 151 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 KRBOX1C9JBD0 128 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 LGALS8O00214 317 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 DUS4LO95620 317 aaKnown RBP11.58□□□□□ -0.56
LDLR-203ENST00000535915 PLATP00750 562 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 COX6A1P12074 109 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 RPL35P42766 123 aaKnown RBP11.58□□□□□ -0.56
LDLR-203ENST00000535915 ARFRP1Q13795 201 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 HOGA1Q86XE5 327 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 PNLDC1Q8NA58 520 aaKnown RBP11.58□□□□□ -0.56
LDLR-203ENST00000535915 GJC3Q8NFK1 279 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 CYYR1Q96J86 154 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 IMMP1LQ96LU5 166 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 ZNF385AQ96PM9 386 aaKnown RBP11.58□□□□□ -0.56
LDLR-203ENST00000535915 HPF1Q9NWY4 346 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 DKKL1Q9UK85 242 aa11.58□□□□□ -0.56
LDLR-203ENST00000535915 OR5H15A6NDH6 313 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 A8MXK9 166 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 RAD51DO75771 328 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 SSR4P51571 173 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 SCRN3Q0VDG4 424 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 FAM189A2Q15884 450 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 EXT1Q16394 746 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 TMEM156Q8N614 296 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 TERB2Q8NHR7 220 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 THAP6Q8TBB0 222 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 LYZL4Q96KX0 146 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 UCN2Q96RP3 112 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 RBM24Q9BX46 236 aaKnown RBP11.57□□□□□ -0.56
LDLR-203ENST00000535915 WDR13Q9H1Z4 485 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 SLC25A32Q9H2D1 315 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 C13orf42A0A1B0GVH6 325 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 C5orf51A6NDU8 294 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 C9J4A7 227 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 BCL2L11O43521 198 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 EIF1BO60739 113 aaKnown RBP11.57□□□□□ -0.56
LDLR-203ENST00000535915 CCL4P13236 92 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 LIFP15018 202 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 LUMP51884 338 aaPredicted RBP11.57□□□□□ -0.56
LDLR-203ENST00000535915 DSCR4P56555 118 aaPredicted RBP11.57□□□□□ -0.56
LDLR-203ENST00000535915 TAS2R31P59538 309 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 ZNF169Q14929 603 aaPredicted RBP11.57□□□□□ -0.56
LDLR-203ENST00000535915 KISS1Q15726 138 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 FAM74A1Q5RGS3 127 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 ACOT7LQ6ZUV0 252 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 OR51T1Q8NGJ9 327 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 ZNF471Q9BX82 626 aaPredicted RBP11.57□□□□□ -0.56
LDLR-203ENST00000535915 ANGPTL4Q9BY76 406 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 ZNF700Q9H0M5 742 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 OR10A2Q9H208 303 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 COL6A3P12111 3177 aa11.57□□□□□ -0.56
LDLR-203ENST00000535915 RNF222A6NCQ9 220 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 D6RAR5 112 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 HPP00738 406 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 FGF2P09038 288 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 STARP49675 285 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 NPY4RP50391 375 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 ECH1Q13011 328 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 ENDOGQ14249 297 aaKnown RBP11.56□□□□□ -0.56
LDLR-203ENST00000535915 PNLIPRP3Q17RR3 467 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 C10orf128Q5T292 105 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 ARMC10Q8N2F6 343 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 BVESQ8NE79 360 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 PXT1Q8NFP0 134 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 SSC4DQ8WTU2 575 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 TMEM54Q969K7 222 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms