RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 RAB13P51153 203 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 RAP1BP61224 184 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 LCN6P62502 163 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 RAP1AP62834 184 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 ZNF91Q05481 1191 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 CR1LQ2VPA4 569 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 SPATA46Q5T0L3 261 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 THEM4Q5T1C6 240 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 CD276Q5ZPR3 534 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 MBOAT2Q6ZWT7 520 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 CYP4Z1Q86W10 505 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 PHC2Q8IXK0 858 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 RNF113BQ8IZP6 322 aaKnown RBP7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 ZNF431Q8TF32 576 aaPredicted RBP7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 TMEM158Q8WZ71 300 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 AP3S1Q92572 193 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 SOSTQ9BQB4 213 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 REPIN1Q9BWE0 567 aaKnown RBP7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 MMP28Q9H239 520 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 PPIL3Q9H2H8 161 aaKnown RBP7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 HINT3Q9NQE9 182 aaKnown RBP7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 SLCO1C1Q9NYB5 712 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 COA4Q9NYJ1 87 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 U3KQV3 271 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 CUBNO60494 3623 aa7.3□□□□□ -1.24
SFSWAP-202ENST00000535202 IGLV3-9A0A075B6K5 115 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 A0A1B0GW55 424 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 C7orf66A4D0T2 115 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 C5orf49A4QMS7 147 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 ZNF670-ZNF695F2Z2N8 137 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 XKRYO14609 159 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 CDC42EP2O14613 210 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 PLA2G10O15496 165 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 PPIHO43447 177 aaKnown RBP7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 MPZL2O60487 215 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 CDC14BO60729 498 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 CST2P09228 141 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 DUX4L2P0CJ85 424 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 DUX4L3P0CJ86 424 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 DUX4L4P0CJ87 422 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 DUX4L5P0CJ88 424 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 DUX4L6P0CJ89 424 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 DUX4L7P0CJ90 424 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 SMIM6P0DI80 62 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 ARSBP15848 533 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 MSR1P21757 451 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 GCH1P30793 250 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 WNT5AP41221 380 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 GUCA1AP43080 201 aaPredicted RBP7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 MEOX2P50222 304 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 RAG2P55895 527 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 CCL8P80075 99 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 PSG4Q00888 419 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 SRSF2Q01130 221 aaKnown RBP7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 FHL1Q13642 323 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 TSTQ16762 297 aaKnown RBP7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 Q3ZCU0 254 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 DDI2Q5TDH0 399 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 FAM27BQ5VT28 67 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 CFAP77Q6ZQR2 320 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 HSD17B13Q7Z5P4 300 aaPredicted RBP7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 ZNF101Q8IZC7 436 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 UXS1Q8NBZ7 420 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 OR4D10Q8NGI6 311 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 OR6M1Q8NGM8 313 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 CLDND2Q8NHS1 167 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 ABHD4Q8TB40 342 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 GTF3AQ92664 365 aaKnown RBP7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 FAM46AQ96IP4 442 aaKnown RBP7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 POM121L2Q96KW2 1035 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 Q96MT0 163 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 C12orf57Q99622 126 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 ZNF436Q9C0F3 470 aaPredicted RBP7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 OR2H1Q9GZK4 316 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 WNT5BQ9H1J7 359 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 FN3KQ9H479 309 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 NMNAT1Q9HAN9 279 aaPredicted RBP7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 GRHPRQ9UBQ7 328 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 DUX4Q9UBX2 424 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 RPS6KA6Q9UK32 745 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 ADAM18Q9Y3Q7 739 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 ENPP4Q9Y6X5 453 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 V9GYQ6 96 aa7.29□□□□□ -1.24
SFSWAP-202ENST00000535202 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.29□□□□□ -1.242e-20■□□□□ 11.3
SFSWAP-202ENST00000535202 LOC100509620A0A075B734 347 aa7.28□□□□□ -1.24
SFSWAP-202ENST00000535202 A0A0A6YYJ9 748 aa7.28□□□□□ -1.24
SFSWAP-202ENST00000535202 LOC100506127A0A0U1RQW1 187 aa7.28□□□□□ -1.24
SFSWAP-202ENST00000535202 FAM240BA0A1B0GVZ2 78 aa7.28□□□□□ -1.24
SFSWAP-202ENST00000535202 B4DSR2 109 aa7.28□□□□□ -1.24
SFSWAP-202ENST00000535202 WNT9BO14905 357 aa7.28□□□□□ -1.24
SFSWAP-202ENST00000535202 SPRY3O43610 288 aa7.28□□□□□ -1.24
SFSWAP-202ENST00000535202 SSX5O60225 188 aa7.28□□□□□ -1.24
SFSWAP-202ENST00000535202 RP2O75695 350 aa7.28□□□□□ -1.24
SFSWAP-202ENST00000535202 MT-ND5P03915 603 aa7.28□□□□□ -1.24
SFSWAP-202ENST00000535202 SCG5P05408 212 aa7.28□□□□□ -1.24
SFSWAP-202ENST00000535202 H1F0P07305 194 aaKnown RBP7.28□□□□□ -1.24
SFSWAP-202ENST00000535202 CD14P08571 375 aa7.28□□□□□ -1.24
SFSWAP-202ENST00000535202 ACSM4P0C7M7 580 aa7.28□□□□□ -1.24
SFSWAP-202ENST00000535202 ANXA3P12429 323 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms