RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 GSK3BP49841 420 aa12.17□□□□□ -0.46
CTSB-230ENST00000534149 SLC7A2P52569 658 aa12.17□□□□□ -0.46
CTSB-230ENST00000534149 SLC35F1Q5T1Q4 408 aa12.17□□□□□ -0.46
CTSB-230ENST00000534149 NCR3LG1Q68D85 454 aa12.17□□□□□ -0.46
CTSB-230ENST00000534149 DCXRQ7Z4W1 244 aa12.17□□□□□ -0.46
CTSB-230ENST00000534149 ZDHHC21Q8IVQ6 265 aa12.17□□□□□ -0.46
CTSB-230ENST00000534149 OR51G2Q8NGK0 314 aa12.17□□□□□ -0.46
CTSB-230ENST00000534149 OR9Q1Q8NGQ5 310 aa12.17□□□□□ -0.46
CTSB-230ENST00000534149 PHF21AQ96BD5 680 aa12.17□□□□□ -0.46
CTSB-230ENST00000534149 C12orf43Q96C57 262 aaKnown RBP12.17□□□□□ -0.46
CTSB-230ENST00000534149 DHRS1Q96LJ7 313 aa12.17□□□□□ -0.46
CTSB-230ENST00000534149 FUZQ9BT04 418 aa12.17□□□□□ -0.46
CTSB-230ENST00000534149 MMP28Q9H239 520 aa12.17□□□□□ -0.46
CTSB-230ENST00000534149 METTL8Q9H825 291 aaKnown RBP12.17□□□□□ -0.46
CTSB-230ENST00000534149 ZNF391Q9UJN7 358 aa12.17□□□□□ -0.46
CTSB-230ENST00000534149 CAPN7Q9Y6W3 813 aa12.17□□□□□ -0.46
CTSB-230ENST00000534149 A0A1W2PQ09 198 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 NKX6-3A6NJ46 265 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 M0R1W7 72 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 CDIPTO14735 213 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 DDOSTP39656 456 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 NAA10P41227 235 aaPredicted RBP12.16□□□□□ -0.46
CTSB-230ENST00000534149 FAM3AP98173 230 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.16□□□□□ -0.46
CTSB-230ENST00000534149 TAF13Q15543 124 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 LRRC75BQ2VPJ9 315 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 VAX1Q5SQQ9 334 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 ATPAF1Q5TC12 328 aaPredicted RBP12.16□□□□□ -0.46
CTSB-230ENST00000534149 HCP5Q6MZN7 132 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 PGBD2Q6P3X8 592 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 CRIP3Q6Q6R5 217 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 SLC16A9Q7RTY1 509 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 CYB561A3Q8NBI2 242 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 PROKR2Q8NFJ6 384 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 OR4S1Q8NGB4 309 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 OR51L1Q8NGJ5 315 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 OR4C15Q8NGM1 316 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 ZNRF4Q8WWF5 429 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 SPSB4Q96A44 273 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 AJUBAQ96IF1 538 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 C7orf34Q96L11 122 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 GAFA1Q96PS6 74 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 KCNJ15Q99712 375 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 WDR13Q9H1Z4 485 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 RANBP3Q9H6Z4 567 aaPredicted RBP12.16□□□□□ -0.46
CTSB-230ENST00000534149 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.16□□□□□ -0.46
CTSB-230ENST00000534149 CENPMQ9NSP4 180 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 HAO2Q9NYQ3 351 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 SLC25A10Q9UBX3 287 aaPredicted RBP12.16□□□□□ -0.46
CTSB-230ENST00000534149 COMMD3-BMI1R4GMX3 469 aa12.16□□□□□ -0.46
CTSB-230ENST00000534149 HMGB1P1B2RPK0 211 aaPredicted RBP12.15□□□□□ -0.46
CTSB-230ENST00000534149 CHST1O43916 411 aa12.15□□□□□ -0.46
CTSB-230ENST00000534149 FBXO24O75426 580 aa12.15□□□□□ -0.46
CTSB-230ENST00000534149 TIPRLO75663 272 aa12.15□□□□□ -0.46
CTSB-230ENST00000534149 SPARCP09486 303 aa12.15□□□□□ -0.46
CTSB-230ENST00000534149 CD28P10747 220 aa12.15□□□□□ -0.46
CTSB-230ENST00000534149 NDUFB7P17568 137 aa12.15□□□□□ -0.46
CTSB-230ENST00000534149 KRT72Q14CN4 511 aa12.15□□□□□ -0.46
CTSB-230ENST00000534149 DGUOKQ16854 277 aa12.15□□□□□ -0.46
CTSB-230ENST00000534149 ZBTB37Q5TC79 503 aa12.15□□□□□ -0.46
CTSB-230ENST00000534149 FAM86B1Q8N7N1 296 aa12.15□□□□□ -0.46
CTSB-230ENST00000534149 R3HDM4Q96D70 268 aa12.15□□□□□ -0.46
CTSB-230ENST00000534149 SLAMF6Q96DU3 332 aa12.15□□□□□ -0.46
CTSB-230ENST00000534149 DUS3LQ96G46 650 aaKnown RBP12.15□□□□□ -0.46
CTSB-230ENST00000534149 NKX3-1Q99801 234 aaPredicted RBP12.15□□□□□ -0.46
CTSB-230ENST00000534149 KCTD14Q9BQ13 255 aaPredicted RBP12.15□□□□□ -0.46
CTSB-230ENST00000534149 FAM234AQ9H0X4 552 aa12.15□□□□□ -0.46
CTSB-230ENST00000534149 ELL3Q9HB65 397 aaPredicted RBP12.15□□□□□ -0.46
CTSB-230ENST00000534149 RAB18Q9NP72 206 aa12.15□□□□□ -0.46
CTSB-230ENST00000534149 SF3B6Q9Y3B4 125 aaKnown RBP12.15□□□□□ -0.46
CTSB-230ENST00000534149 COL7A1Q02388 2944 aa12.15□□□□□ -0.46
CTSB-230ENST00000534149 MEGF11A6BM72 1044 aa12.14□□□□□ -0.47
CTSB-230ENST00000534149 ANGPTL7O43827 346 aa12.14□□□□□ -0.47
CTSB-230ENST00000534149 IDH3BO43837 385 aa12.14□□□□□ -0.47
CTSB-230ENST00000534149 ANXA2P07355 339 aaKnown RBP12.14□□□□□ -0.47
CTSB-230ENST00000534149 POU1F1P28069 291 aa12.14□□□□□ -0.47
CTSB-230ENST00000534149 SPIBQ01892 262 aa12.14□□□□□ -0.47
CTSB-230ENST00000534149 BLMHQ13867 455 aa12.14□□□□□ -0.47
CTSB-230ENST00000534149 HABP2Q14520 560 aaPredicted RBP12.14□□□□□ -0.47
CTSB-230ENST00000534149 TIGD6Q17RP2 521 aa12.14□□□□□ -0.47
CTSB-230ENST00000534149 FOXB2Q5VYV0 432 aa12.14□□□□□ -0.47
CTSB-230ENST00000534149 CGB2Q6NT52 195 aa12.14□□□□□ -0.47
CTSB-230ENST00000534149 ZNF788Q6ZQV5 615 aa12.14□□□□□ -0.47
CTSB-230ENST00000534149 REEP6Q96HR9 211 aa12.14□□□□□ -0.47
CTSB-230ENST00000534149 RAB3IPQ96QF0 476 aaPredicted RBP12.14□□□□□ -0.47
CTSB-230ENST00000534149 PAPOLGQ9BWT3 736 aaKnown RBP12.14□□□□□ -0.47
CTSB-230ENST00000534149 NPFFR1Q9GZQ6 430 aa12.14□□□□□ -0.47
CTSB-230ENST00000534149 DNTTIP1Q9H147 329 aa12.14□□□□□ -0.47
CTSB-230ENST00000534149 TLNRD1Q9H1K6 362 aa12.14□□□□□ -0.47
CTSB-230ENST00000534149 hCG_38984A0A1B0GV85 526 aa12.13□□□□□ -0.47
CTSB-230ENST00000534149 ZNF878C9JN71 531 aa12.13□□□□□ -0.47
CTSB-230ENST00000534149 H0YAE9 185 aa12.13□□□□□ -0.47
CTSB-230ENST00000534149 AKR7A2O43488 359 aa12.13□□□□□ -0.47
CTSB-230ENST00000534149 GADD45GO95257 159 aa12.13□□□□□ -0.47
CTSB-230ENST00000534149 MPIG6BO95866 241 aa12.13□□□□□ -0.47
CTSB-230ENST00000534149 GNALP38405 381 aa12.13□□□□□ -0.47
CTSB-230ENST00000534149 CX3CR1P49238 355 aa12.13□□□□□ -0.47
CTSB-230ENST00000534149 BMXP51813 675 aa12.13□□□□□ -0.47
CTSB-230ENST00000534149 MXRA7P84157 204 aa12.13□□□□□ -0.47
CTSB-230ENST00000534149 GFOD2Q3B7J2 385 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms