RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 C8orf46Q8TAG6 207 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 MIPOL1Q8TD10 442 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 SLC26A7Q8TE54 656 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 ADAMTS16Q8TE57 1224 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 NSMAFQ92636 917 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 TNFRSF14Q92956 283 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 MCHR2Q969V1 340 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 SEH1LQ96EE3 360 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 PLEKHA8Q96JA3 519 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 SLC35G5Q96KT7 338 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 LRR1Q96L50 414 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 FCRL1Q96LA6 429 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 C4orf45Q96LM5 186 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 CNBD2Q96M20 576 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 C3orf30Q96M34 536 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 DUX3Q96PT4 197 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 ZNF347Q96SE7 839 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 CCT7Q99832 543 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 ECSITQ9BQ95 431 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 WFDC6Q9BQY6 131 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 BTBD10Q9BSF8 475 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 MECRQ9BV79 373 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 TMEM109Q9BVC6 243 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 CDCA4Q9BXL8 241 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 DPY30Q9C005 99 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 WNT5BQ9H1J7 359 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 SLC38A1Q9H2H9 487 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 VCX3BQ9H321 246 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 MMADHCQ9H3L0 296 aaPredicted RBP2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 MUC13Q9H3R2 512 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 MEAF6Q9HAF1 191 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 VCX3AQ9NNX9 186 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 UFSP2Q9NUQ7 469 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 RHBDL2Q9NX52 303 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 GLTPQ9NZD2 209 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 ONECUT1Q9UBC0 465 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 EIF3KQ9UBQ5 218 aaKnown RBP2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 EMCNQ9ULC0 261 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 TMCO1Q9UM00 188 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 MAB21L2Q9Y586 359 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 DNAH5Q8TE73 4624 aa2.37□□□□□ -2.03
CHMP4A-208ENST00000534106 DNAH6Q9C0G6 4158 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 APOBP04114 4563 aaKnown RBP2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 LOC102725191A0A1B0GVB3 256 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 FAM90A20PA6NIJ5 464 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 A6NLC8 198 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 DUXAA6NLW8 204 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 SLC28A1O00337 649 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 FAAHO00519 579 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 DVL1O14640 695 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 AIM2O14862 343 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 MLNRO43193 412 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 ADAM20O43506 726 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 HNRNPCL1O60812 293 aaKnown RBP2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 PFDN1O60925 122 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 NOL3O60936 208 aaKnown RBP2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 GAS8-AS1O95177 125 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 SLC2A10O95528 541 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 PAHP00439 452 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 AK1P00568 194 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 GYPAP02724 150 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 G6PDP11413 515 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 ATP6V1B1P15313 513 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 IL7RP16871 459 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 PRPH2P23942 346 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 HTR2AP28223 471 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 ARRB2P32121 409 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 SAA4P35542 130 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 CHI3L1P36222 383 aaPredicted RBP2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 GDI2P50395 445 aaKnown RBP2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 NUDT2P50583 147 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 LUMP51884 338 aaPredicted RBP2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 COPZ1P61923 177 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 ERVK-25P63136 954 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 MAB21L1Q13394 359 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 DYNC1I2Q13409 638 aaKnown RBP2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 SEC23BQ15437 767 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 BAK1Q16611 211 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 UGT3A2Q3SY77 523 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 SLC36A2Q495M3 483 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 CLEC12AQ5QGZ9 265 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 ATAD3BQ5T9A4 648 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 LPCAT4Q643R3 524 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 HCP5Q6MZN7 132 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 ARL9Q6T311 187 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 ZNF826PQ6ZT77 177 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 SLC35D2Q76EJ3 337 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 ASRGL1Q7L266 308 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 NET1Q7Z628 596 aaPredicted RBP2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 NR2C2APQ86WQ0 139 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 RIMKLAQ8IXN7 391 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 RPP25LQ8N5L8 163 aaKnown RBP2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 C10orf53Q8N6V4 93 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 CLDN22Q8N7P3 220 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 PCYOX1LQ8NBM8 494 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 Q8NFD4 153 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 OR4A15Q8NGL6 344 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 OR52P1PQ8NH57 321 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 OR5R1Q8NH85 324 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 SFXN5Q8TD22 340 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms