RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 MAP2K3P46734 347 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 NPY4RP50391 375 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 CXCR4P61073 352 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 IL5RAQ01344 420 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 PAX2Q02962 417 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 MPPED2Q15777 294 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 KCNJ8Q15842 424 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 ZNF829Q3KNS6 432 aaPredicted RBP8.24□□□□□ -1.09
NUP98-220ENST00000533346 TMEM42Q69YG0 159 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 ZBTB49Q6ZSB9 765 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 KCTD20Q7Z5Y7 419 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 ELMOD2Q8IZ81 293 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 CBR4Q8N4T8 237 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 GCSAMQ8N6F7 178 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 OR4M2Q8NGB6 313 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 OR10Z1Q8NGY1 313 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 DMRTB1Q96MA1 342 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 SLC29A1Q99808 456 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 TMEM246Q9BRR3 403 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 TMPRSS13Q9BYE2 586 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 PBOV1Q9GZY1 135 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 RIBC2Q9H4K1 309 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 NARFLQ9H6Q4 476 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 MRPS18AQ9NVS2 196 aaKnown RBP8.24□□□□□ -1.09
NUP98-220ENST00000533346 DNAJC27Q9NZQ0 273 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 KAAG1Q9UBP8 84 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 MRM2Q9UI43 246 aaKnown RBP8.24□□□□□ -1.09
NUP98-220ENST00000533346 EXOGQ9Y2C4 368 aaKnown RBP8.24□□□□□ -1.09
NUP98-220ENST00000533346 PCDHGB1Q9Y5G3 927 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 SNX5Q9Y5X3 404 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 R4GMQ9 66 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 ARHGAP32A7KAX9 2087 aa8.24□□□□□ -1.09
NUP98-220ENST00000533346 JMJD1CQ15652 2540 aa8.23□□□□□ -1.09
NUP98-220ENST00000533346 A0A0A6YYJ9 748 aa8.23□□□□□ -1.09
NUP98-220ENST00000533346 ZNF816-ZNF321PA0A0X1KG74 233 aa8.23□□□□□ -1.09
NUP98-220ENST00000533346 SNTNA6NMZ2 147 aa8.23□□□□□ -1.09
NUP98-220ENST00000533346 LGALS8O00214 317 aa8.23□□□□□ -1.09
NUP98-220ENST00000533346 MTRF1O75570 445 aaKnown RBP8.23□□□□□ -1.09
NUP98-220ENST00000533346 DHRS3O75911 302 aa8.23□□□□□ -1.09
NUP98-220ENST00000533346 CYB5R3P00387 301 aaPredicted RBP8.23□□□□□ -1.09
NUP98-220ENST00000533346 FSHBP01225 129 aa8.23□□□□□ -1.09
NUP98-220ENST00000533346 MRPL3P09001 348 aaKnown RBP8.23□□□□□ -1.09
NUP98-220ENST00000533346 ZNF12P17014 697 aa8.23□□□□□ -1.09
NUP98-220ENST00000533346 ZFP36P26651 326 aaKnown RBP8.23□□□□□ -1.09
NUP98-220ENST00000533346 PRSS12P56730 875 aa8.23□□□□□ -1.09
NUP98-220ENST00000533346 ZNF154Q13106 437 aa8.23□□□□□ -1.09
NUP98-220ENST00000533346 ZSCAN26Q16670 478 aa8.23□□□□□ -1.09
NUP98-220ENST00000533346 PRAMEF6Q5VXH4 476 aa8.23□□□□□ -1.09
NUP98-220ENST00000533346 FDX2Q6P4F2 183 aa8.23□□□□□ -1.09
NUP98-220ENST00000533346 ZNF841Q6ZN19 808 aa8.23□□□□□ -1.09
NUP98-220ENST00000533346 C1orf229Q6ZS94 237 aaPredicted RBP8.23□□□□□ -1.09
NUP98-220ENST00000533346 WDR86Q86TI4 376 aa8.23□□□□□ -1.09
NUP98-220ENST00000533346 RFLNBQ8N5W9 214 aa8.23□□□□□ -1.09
NUP98-220ENST00000533346 OR1M1Q8NGA1 313 aa8.23□□□□□ -1.09
NUP98-220ENST00000533346 OR51G2Q8NGK0 314 aa8.23□□□□□ -1.09
NUP98-220ENST00000533346 RHOXF1Q8NHV9 184 aa8.23□□□□□ -1.09
NUP98-220ENST00000533346 OR5P3Q8WZ94 311 aa8.23□□□□□ -1.09
NUP98-220ENST00000533346 C12orf43Q96C57 262 aaKnown RBP8.23□□□□□ -1.09
NUP98-220ENST00000533346 NEIL1Q96FI4 390 aaPredicted RBP8.23□□□□□ -1.09
NUP98-220ENST00000533346 MBOAT4Q96T53 435 aa8.23□□□□□ -1.09
NUP98-220ENST00000533346 PCDHB10Q9UN67 800 aa8.23□□□□□ -1.09
NUP98-220ENST00000533346 RHBDD3Q9Y3P4 386 aa8.23□□□□□ -1.09
NUP98-220ENST00000533346 INSIG2Q9Y5U4 225 aa8.23□□□□□ -1.09
NUP98-220ENST00000533346 V9GYS6 101 aa8.23□□□□□ -1.09
NUP98-220ENST00000533346 TRAV38-1A0A0B4J264 116 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 A0A1B0GTI1 187 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 LOC100130705A0A1B0GUX0 176 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 A0A1W2PQL4 384 aaPredicted RBP8.22□□□□□ -1.09
NUP98-220ENST00000533346 ISPDA4D126 451 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 METTL15A6NJ78 407 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 ANXA2P2A6NMY6 339 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 TRAPPC2LH3BP13 241 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 M0R129 80 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 DLGAP1O14490 977 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 AVPP01185 164 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 KRT8P05787 483 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 ACAA1P09110 424 aaPredicted RBP8.22□□□□□ -1.09
NUP98-220ENST00000533346 MUC1P15941 1255 aaPredicted RBP8.22□□□□□ -1.09
NUP98-220ENST00000533346 GNALP38405 381 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 MTNR1AP48039 350 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 ACTC1P68032 377 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 ACTA1P68133 377 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 ZNF85Q03923 595 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 PAX8Q06710 450 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 RIPPLY1Q0D2K3 151 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 SCGB2A2Q13296 93 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 CEACAM21Q3KPI0 293 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 CDONQ4KMG0 1287 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 ESCO2Q56NI9 601 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 ATPAF1Q5TC12 328 aaPredicted RBP8.22□□□□□ -1.09
NUP98-220ENST00000533346 LPCAT4Q643R3 524 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 WDR82Q6UXN9 313 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 PLEKHG7Q6ZR37 379 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 SSX6Q7RTT6 188 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 C1QL2Q7Z5L3 287 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 ENTHD1Q8IYW4 607 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 PACRGLQ8N7B6 248 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 SEMA6DQ8NFY4 1073 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 OR5A2Q8NGI9 324 aa8.22□□□□□ -1.09
NUP98-220ENST00000533346 OR14K1Q8NGZ2 314 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms