RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 CHRM4P08173 479 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 SOD3P08294 240 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 MPC1LP0DKB6 136 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 ESDP10768 282 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 PNMTP11086 282 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 TPT1P13693 172 aaKnown RBP4.85□□□□□ -1.63
CD44-236ENST00000533222 SHC1P29353 583 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 SERPINA4P29622 427 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 MIPP30301 263 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 ADORA1P30542 326 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 DCTP40126 519 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 MDH2P40926 338 aaKnown RBP4.85□□□□□ -1.63
CD44-236ENST00000533222 CRYBB2P43320 205 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 THBS3P49746 956 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 UCNP55089 124 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 HIST1H3AP68431 136 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 BTN3A2P78410 334 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 EFNB1P98172 346 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 GAGE5Q13069 117 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 GAGE6Q13070 117 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 SNAI3Q3KNW1 292 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 VWA2Q5GFL6 755 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 LDLRAD2Q5SZI1 272 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 FAM78BQ5VT40 261 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 LIPMQ5VYY2 423 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 SLC8B1Q6J4K2 584 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 TEX43Q6ZNM6 134 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 COMMD6Q7Z4G1 85 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 LRRTM1Q86UE6 522 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 FBXO16Q8IX29 292 aaPredicted RBP4.85□□□□□ -1.63
CD44-236ENST00000533222 BOD1L2Q8IYS8 172 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 BEST3Q8N1M1 668 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 NPEPL1Q8NDH3 523 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 RDM1Q8NG50 284 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 OR4N2Q8NGD1 307 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 OR4K1Q8NGD4 311 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 OR51A2Q8NGJ7 313 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 OR2A12Q8NGT7 310 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 RHEBL1Q8TAI7 183 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 ZNF519Q8TB69 540 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 ZNF564Q8TBZ8 553 aaPredicted RBP4.85□□□□□ -1.63
CD44-236ENST00000533222 DNASE2BQ8WZ79 361 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 OR4K3Q96R72 315 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 LYSMD1Q96S90 227 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 ARHGDIGQ99819 225 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 TIMM29Q9BSF4 260 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 RAB11FIP5Q9BXF6 653 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 SELENOIQ9C0D9 397 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 SPRTNQ9H040 489 aaPredicted RBP4.85□□□□□ -1.63
CD44-236ENST00000533222 ATG10Q9H0Y0 220 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 SRMSQ9H3Y6 488 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 ELL3Q9HB65 397 aaPredicted RBP4.85□□□□□ -1.63
CD44-236ENST00000533222 HEYLQ9NQ87 328 aaPredicted RBP4.85□□□□□ -1.63
CD44-236ENST00000533222 PARP11Q9NR21 331 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 SLC7A10Q9NS82 523 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 ANKRD10Q9NXR5 420 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 GPR83Q9NYM4 423 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 BET1LQ9NYM9 111 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 AHSPQ9NZD4 102 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 SHPKQ9UHJ6 478 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 FBXW2Q9UKT8 454 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 EXO1Q9UQ84 846 aaKnown RBP4.85□□□□□ -1.63
CD44-236ENST00000533222 C14orf166Q9Y224 244 aaKnown RBP4.85□□□□□ -1.63
CD44-236ENST00000533222 HDGFL3Q9Y3E1 203 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 DOT1LQ8TEK3 1739 aa4.85□□□□□ -1.63
CD44-236ENST00000533222 DLEC1Q9Y238 1755 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 PEAK1Q9H792 1746 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 TRBV24-1A0A075B6N3 115 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 A0A087WV48 116 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.84□□□□□ -1.63
CD44-236ENST00000533222 TRAV38-1A0A0B4J264 116 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 A0A0J9YY10 115 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 hCG_38984A0A1B0GV85 526 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 A0A1B0GX78 115 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 MBLAC1A4D2B0 266 aaPredicted RBP4.84□□□□□ -1.63
CD44-236ENST00000533222 OR2AG2A6NM03 316 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 ZNF814B7Z6K7 855 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 J3QR89 54 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 FXYD1O00168 92 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 TNFRSF13BO14836 293 aaPredicted RBP4.84□□□□□ -1.63
CD44-236ENST00000533222 RAB29O14966 203 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 B4GALT5O43286 388 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 HCRTR1O43613 425 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 DUX1O43812 170 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 KLK8O60259 260 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 FCMRO60667 390 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 S1PR2O95136 353 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 LCATP04180 440 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 FCGR3AP08637 254 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 EBLN1P0CF75 366 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 PSG2P11465 335 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 FABP4P15090 132 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 ATF1P18846 271 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 FUT1P19526 365 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 CTGFP29279 349 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 OR1D2P34982 312 aa4.84□□□□□ -1.63
CD44-236ENST00000533222 FRKP42685 505 aaPredicted RBP4.84□□□□□ -1.63
CD44-236ENST00000533222 RBM34P42696 430 aaKnown RBP4.84□□□□□ -1.63
CD44-236ENST00000533222 RPL29P47914 159 aaKnown RBP4.84□□□□□ -1.63
CD44-236ENST00000533222 PTH2RP49190 550 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms