RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 FCGR1BQ92637 280 aa14.03□□□□□ -0.16
PKP3-209ENST00000533069 LGALS12Q96DT0 336 aa14.03□□□□□ -0.16
PKP3-209ENST00000533069 SIGLEC11Q96RL6 698 aa14.03□□□□□ -0.16
PKP3-209ENST00000533069 REPIN1Q9BWE0 567 aaKnown RBP14.03□□□□□ -0.16
PKP3-209ENST00000533069 AMBNQ9NP70 447 aa14.03□□□□□ -0.16
PKP3-209ENST00000533069 G6PC2Q9NQR9 355 aa14.03□□□□□ -0.16
PKP3-209ENST00000533069 DCAF16Q9NXF7 216 aa14.03□□□□□ -0.16
PKP3-209ENST00000533069 AASSQ9UDR5 926 aa14.03□□□□□ -0.16
PKP3-209ENST00000533069 SCOCQ9UIL1 159 aa14.03□□□□□ -0.16
PKP3-209ENST00000533069 SVEP1Q4LDE5 3571 aa14.03□□□□□ -0.16
PKP3-209ENST00000533069 CD300LBA8K4G0 201 aa14.02□□□□□ -0.17
PKP3-209ENST00000533069 RNF212BA8MTL3 300 aa14.02□□□□□ -0.17
PKP3-209ENST00000533069 F5H5P2 479 aa14.02□□□□□ -0.17
PKP3-209ENST00000533069 H0YL77 283 aa14.02□□□□□ -0.17
PKP3-209ENST00000533069 J3QLI3 93 aa14.02□□□□□ -0.17
PKP3-209ENST00000533069 XRCC2O43543 280 aa14.02□□□□□ -0.17
PKP3-209ENST00000533069 RPSAP08865 295 aaKnown RBP14.02□□□□□ -0.17
PKP3-209ENST00000533069 CPT2P23786 658 aa14.02□□□□□ -0.17
PKP3-209ENST00000533069 HSD11B1P28845 292 aa14.02□□□□□ -0.17
PKP3-209ENST00000533069 MDH2P40926 338 aaKnown RBP14.02□□□□□ -0.17
PKP3-209ENST00000533069 GATA4P43694 442 aa14.02□□□□□ -0.17
PKP3-209ENST00000533069 CX3CR1P49238 355 aa14.02□□□□□ -0.17
PKP3-209ENST00000533069 ZNF92Q03936 586 aa14.02□□□□□ -0.17
PKP3-209ENST00000533069 ZMYND11Q15326 602 aa14.02□□□□□ -0.17
PKP3-209ENST00000533069 GLYATL3Q5SZD4 288 aa14.02□□□□□ -0.17
PKP3-209ENST00000533069 LRRC28Q86X40 367 aaPredicted RBP14.02□□□□□ -0.17
PKP3-209ENST00000533069 SPATA3Q8NHX4 192 aa14.02□□□□□ -0.17
PKP3-209ENST00000533069 ASB17Q8WXJ9 295 aa14.02□□□□□ -0.17
PKP3-209ENST00000533069 ERGIC1Q969X5 290 aa14.02□□□□□ -0.17
PKP3-209ENST00000533069 ZMYND19Q96E35 227 aaPredicted RBP14.02□□□□□ -0.17
PKP3-209ENST00000533069 ABHD6Q9BV23 337 aa14.02□□□□□ -0.17
PKP3-209ENST00000533069 MRPS26Q9BYN8 205 aaKnown RBP14.02□□□□□ -0.17
PKP3-209ENST00000533069 ADGRL4Q9HBW9 690 aa14.02□□□□□ -0.17
PKP3-209ENST00000533069 MRPL15Q9P015 296 aaKnown RBP14.02□□□□□ -0.17
PKP3-209ENST00000533069 PCDHB10Q9UN67 800 aa14.02□□□□□ -0.17
PKP3-209ENST00000533069 ERGIC3Q9Y282 383 aa14.02□□□□□ -0.17
PKP3-209ENST00000533069 CUBNO60494 3623 aa14.02□□□□□ -0.17
PKP3-209ENST00000533069 MALRD1Q5VYJ5 2156 aa14.02□□□□□ -0.17
PKP3-209ENST00000533069 GGT3PA6NGU5 568 aa14.01□□□□□ -0.17
PKP3-209ENST00000533069 ZNF670-ZNF695F2Z2N8 137 aa14.01□□□□□ -0.17
PKP3-209ENST00000533069 J3QRE1 110 aa14.01□□□□□ -0.17
PKP3-209ENST00000533069 GMDSO60547 372 aa14.01□□□□□ -0.17
PKP3-209ENST00000533069 FOXH1O75593 365 aa14.01□□□□□ -0.17
PKP3-209ENST00000533069 FSTL3O95633 263 aa14.01□□□□□ -0.17
PKP3-209ENST00000533069 CD200P41217 278 aa14.01□□□□□ -0.17
PKP3-209ENST00000533069 PRSS12P56730 875 aa14.01□□□□□ -0.17
PKP3-209ENST00000533069 ACTA2P62736 377 aa14.01□□□□□ -0.17
PKP3-209ENST00000533069 ACTG2P63267 376 aa14.01□□□□□ -0.17
PKP3-209ENST00000533069 TBCEQ15813 527 aaPredicted RBP14.01□□□□□ -0.17
PKP3-209ENST00000533069 FAHD2BQ6P2I3 314 aaPredicted RBP14.01□□□□□ -0.17
PKP3-209ENST00000533069 SPATC1Q76KD6 591 aa14.01□□□□□ -0.17
PKP3-209ENST00000533069 C1orf87Q8N0U7 546 aa14.01□□□□□ -0.17
PKP3-209ENST00000533069 RFLNBQ8N5W9 214 aa14.01□□□□□ -0.17
PKP3-209ENST00000533069 OR52I1Q8NGK6 324 aa14.01□□□□□ -0.17
PKP3-209ENST00000533069 OR2AE1Q8NHA4 323 aa14.01□□□□□ -0.17
PKP3-209ENST00000533069 OTOSQ8NHW6 89 aa14.01□□□□□ -0.17
PKP3-209ENST00000533069 SPSB4Q96A44 273 aa14.01□□□□□ -0.17
PKP3-209ENST00000533069 FAHD2AQ96GK7 314 aa14.01□□□□□ -0.17
PKP3-209ENST00000533069 CCDC90BQ9GZT6 254 aa14.01□□□□□ -0.17
PKP3-209ENST00000533069 PATZ1Q9HBE1 687 aaKnown RBP14.01□□□□□ -0.17
PKP3-209ENST00000533069 COL6A5A8TX70 2615 aa14□□□□□ -0.17
PKP3-209ENST00000533069 PPIAL4EA0A075B759 164 aa14□□□□□ -0.17
PKP3-209ENST00000533069 PPIAL4CA0A0B4J2A2 164 aa14□□□□□ -0.17
PKP3-209ENST00000533069 DAPL1A0PJW8 107 aa14□□□□□ -0.17
PKP3-209ENST00000533069 TRIM64CA6NLI5 447 aa14□□□□□ -0.17
PKP3-209ENST00000533069 PPIAL4DF5H284 164 aa14□□□□□ -0.17
PKP3-209ENST00000533069 HLA-DPB1P04440 258 aa14□□□□□ -0.17
PKP3-209ENST00000533069 PPIAL4FP0DN26 164 aa14□□□□□ -0.17
PKP3-209ENST00000533069 SLC2A1P11166 492 aa14□□□□□ -0.17
PKP3-209ENST00000533069 CFL1P23528 166 aaKnown RBP14□□□□□ -0.17
PKP3-209ENST00000533069 DDOSTP39656 456 aa14□□□□□ -0.17
PKP3-209ENST00000533069 OPRL1P41146 370 aa14□□□□□ -0.17
PKP3-209ENST00000533069 MRPL28Q13084 256 aaKnown RBP14□□□□□ -0.17
PKP3-209ENST00000533069 OR8G1Q15617 311 aa14□□□□□ -0.17
PKP3-209ENST00000533069 DCAF12L2Q5VW00 463 aa14□□□□□ -0.17
PKP3-209ENST00000533069 KCTD18Q6PI47 426 aaPredicted RBP14□□□□□ -0.17
PKP3-209ENST00000533069 TMPRSS11AQ6ZMR5 421 aa14□□□□□ -0.17
PKP3-209ENST00000533069 KCTD20Q7Z5Y7 419 aa14□□□□□ -0.17
PKP3-209ENST00000533069 MOGAT3Q86VF5 341 aa14□□□□□ -0.17
PKP3-209ENST00000533069 KLBQ86Z14 1044 aa14□□□□□ -0.17
PKP3-209ENST00000533069 SPERTQ8NA61 448 aa14□□□□□ -0.17
PKP3-209ENST00000533069 OR52H1Q8NGJ2 320 aa14□□□□□ -0.17
PKP3-209ENST00000533069 Q8TCH9 128 aa14□□□□□ -0.17
PKP3-209ENST00000533069 ADAT1Q9BUB4 502 aaKnown RBP14□□□□□ -0.17
PKP3-209ENST00000533069 MND1Q9BWT6 205 aa14□□□□□ -0.17
PKP3-209ENST00000533069 TANC2Q9HCD6 1990 aa14□□□□□ -0.17
PKP3-209ENST00000533069 F5H0A9 414 aaPredicted RBP13.99□□□□□ -0.17
PKP3-209ENST00000533069 MYL12BO14950 172 aa13.99□□□□□ -0.17
PKP3-209ENST00000533069 TBX1O43435 398 aa13.99□□□□□ -0.17
PKP3-209ENST00000533069 ANXA2P07355 339 aaKnown RBP13.99□□□□□ -0.17
PKP3-209ENST00000533069 H2BFMP0C1H6 154 aa13.99□□□□□ -0.17
PKP3-209ENST00000533069 IRF2P14316 349 aa13.99□□□□□ -0.17
PKP3-209ENST00000533069 CA6P23280 308 aa13.99□□□□□ -0.17
PKP3-209ENST00000533069 EGR3Q06889 387 aa13.99□□□□□ -0.17
PKP3-209ENST00000533069 MZT1Q08AG7 82 aa13.99□□□□□ -0.17
PKP3-209ENST00000533069 HNRNPA0Q13151 305 aaKnown RBP13.99□□□□□ -0.17
PKP3-209ENST00000533069 MAB21L1Q13394 359 aa13.99□□□□□ -0.17
PKP3-209ENST00000533069 GALEQ14376 348 aa13.99□□□□□ -0.17
PKP3-209ENST00000533069 TIGD6Q17RP2 521 aa13.99□□□□□ -0.17
PKP3-209ENST00000533069 SLC35F2Q8IXU6 374 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms