RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 UFSP2Q9NUQ7 469 aa15.81■□□□□ 0.12
SSH3-209ENST00000532600 HAO2Q9NYQ3 351 aa15.81■□□□□ 0.12
SSH3-209ENST00000532600 COPS3Q9UNS2 423 aa15.81■□□□□ 0.12
SSH3-209ENST00000532600 PPIAL4AQ9Y536 164 aa15.81■□□□□ 0.12
SSH3-209ENST00000532600 SOX21Q9Y651 276 aaPredicted RBP15.81■□□□□ 0.12
SSH3-209ENST00000532600 TMEM89A2RUT3 159 aa15.8■□□□□ 0.12
SSH3-209ENST00000532600 WBP4O75554 376 aaKnown RBP15.8■□□□□ 0.12
SSH3-209ENST00000532600 RPS2P15880 293 aaKnown RBP15.8■□□□□ 0.12
SSH3-209ENST00000532600 CFPP27918 469 aa15.8■□□□□ 0.12
SSH3-209ENST00000532600 COMPP49747 757 aaPredicted RBP15.8■□□□□ 0.12
SSH3-209ENST00000532600 SHFQ7M4L6 423 aa15.8■□□□□ 0.12
SSH3-209ENST00000532600 PRSS45Q7RTY3 260 aa15.8■□□□□ 0.12
SSH3-209ENST00000532600 BPIFB2Q8N4F0 458 aa15.8■□□□□ 0.12
SSH3-209ENST00000532600 TFAP2CQ92754 450 aa15.8■□□□□ 0.12
SSH3-209ENST00000532600 SPSB4Q96A44 273 aa15.8■□□□□ 0.12
SSH3-209ENST00000532600 C1orf147Q96MC9 270 aaPredicted RBP15.8■□□□□ 0.12
SSH3-209ENST00000532600 ZNF48Q96MX3 618 aaPredicted RBP15.8■□□□□ 0.12
SSH3-209ENST00000532600 CNN2Q99439 309 aaKnown RBP15.8■□□□□ 0.12
SSH3-209ENST00000532600 H2AFY2Q9P0M6 372 aaPredicted RBP15.8■□□□□ 0.12
SSH3-209ENST00000532600 MIOXQ9UGB7 285 aa15.8■□□□□ 0.12
SSH3-209ENST00000532600 OR5V1Q9UGF6 321 aa15.8■□□□□ 0.12
SSH3-209ENST00000532600 WARS2Q9UGM6 360 aaKnown RBP15.8■□□□□ 0.12
SSH3-209ENST00000532600 LRRC30A6NM36 301 aa15.79■□□□□ 0.12
SSH3-209ENST00000532600 ZNF878C9JN71 531 aa15.79■□□□□ 0.12
SSH3-209ENST00000532600 H0YAE9 185 aa15.79■□□□□ 0.12
SSH3-209ENST00000532600 TRIM77I1YAP6 450 aa15.79■□□□□ 0.12
SSH3-209ENST00000532600 HAX1O00165 279 aa15.79■□□□□ 0.12
SSH3-209ENST00000532600 ALOX5APP20292 161 aa15.79■□□□□ 0.12
SSH3-209ENST00000532600 ISL1P61371 349 aa15.79■□□□□ 0.12
SSH3-209ENST00000532600 UBA52P62987 128 aaKnown RBP15.79■□□□□ 0.12
SSH3-209ENST00000532600 OR8G1Q15617 311 aa15.79■□□□□ 0.12
SSH3-209ENST00000532600 SMN1Q16637 294 aaKnown RBP15.79■□□□□ 0.12
SSH3-209ENST00000532600 ARMCX4Q5H9R4 360 aa15.79■□□□□ 0.12
SSH3-209ENST00000532600 TTC23Q5W5X9 447 aa15.79■□□□□ 0.12
SSH3-209ENST00000532600 LAIR2Q6ISS4 152 aa15.79■□□□□ 0.12
SSH3-209ENST00000532600 SIGLECL1Q8N7X8 197 aa15.79■□□□□ 0.12
SSH3-209ENST00000532600 OR56B2PQ8NGI1 322 aa15.79■□□□□ 0.12
SSH3-209ENST00000532600 OR51G2Q8NGK0 314 aa15.79■□□□□ 0.12
SSH3-209ENST00000532600 RNF133Q8WVZ7 376 aa15.79■□□□□ 0.12
SSH3-209ENST00000532600 ERGIC1Q969X5 290 aa15.79■□□□□ 0.12
SSH3-209ENST00000532600 NEIL1Q96FI4 390 aaPredicted RBP15.79■□□□□ 0.12
SSH3-209ENST00000532600 ADAT1Q9BUB4 502 aaKnown RBP15.79■□□□□ 0.12
SSH3-209ENST00000532600 YIPF3Q9GZM5 350 aa15.79■□□□□ 0.12
SSH3-209ENST00000532600 VCXQ9H320 206 aa15.79■□□□□ 0.12
SSH3-209ENST00000532600 MRPL15Q9P015 296 aaKnown RBP15.79■□□□□ 0.12
SSH3-209ENST00000532600 ZNF319Q9P2F9 582 aa15.79■□□□□ 0.12
SSH3-209ENST00000532600 CTSZQ9UBR2 303 aa15.79■□□□□ 0.12
SSH3-209ENST00000532600 NUP50Q9UKX7 468 aa15.79■□□□□ 0.12
SSH3-209ENST00000532600 N6AMT1Q9Y5N5 214 aa15.79■□□□□ 0.12
SSH3-209ENST00000532600 DOCK11Q5JSL3 2073 aa15.79■□□□□ 0.12
SSH3-209ENST00000532600 IGHV2-70DA0A0C4DH43 119 aa15.78■□□□□ 0.12
SSH3-209ENST00000532600 GGT3PA6NGU5 568 aa15.78■□□□□ 0.12
SSH3-209ENST00000532600 H0YJX3 145 aa15.78■□□□□ 0.12
SSH3-209ENST00000532600 TNFRSF13BO14836 293 aaPredicted RBP15.78■□□□□ 0.12
SSH3-209ENST00000532600 GMDSO60547 372 aa15.78■□□□□ 0.12
SSH3-209ENST00000532600 FCN3O75636 299 aa15.78■□□□□ 0.12
SSH3-209ENST00000532600 IGHV4-38-2P0DP08 117 aa15.78■□□□□ 0.12
SSH3-209ENST00000532600 CPT2P23786 658 aa15.78■□□□□ 0.12
SSH3-209ENST00000532600 PSMB10P40306 273 aa15.78■□□□□ 0.12
SSH3-209ENST00000532600 OPRL1P41146 370 aa15.78■□□□□ 0.12
SSH3-209ENST00000532600 IL5RAQ01344 420 aa15.78■□□□□ 0.12
SSH3-209ENST00000532600 C12orf54Q6X4T0 127 aa15.78■□□□□ 0.12
SSH3-209ENST00000532600 DOK3Q7L591 496 aa15.78■□□□□ 0.12
SSH3-209ENST00000532600 WDR86Q86TI4 376 aa15.78■□□□□ 0.12
SSH3-209ENST00000532600 C1orf87Q8N0U7 546 aa15.78■□□□□ 0.12
SSH3-209ENST00000532600 ZNF454Q8N9F8 522 aa15.78■□□□□ 0.12
SSH3-209ENST00000532600 CNIH3Q8TBE1 160 aa15.78■□□□□ 0.12
SSH3-209ENST00000532600 RAB40AQ8WXH6 277 aa15.78■□□□□ 0.12
SSH3-209ENST00000532600 APOL4Q9BPW4 351 aa15.78■□□□□ 0.12
SSH3-209ENST00000532600 MRI1Q9BV20 369 aa15.78■□□□□ 0.12
SSH3-209ENST00000532600 PPP1R3EQ9H7J1 279 aa15.78■□□□□ 0.12
SSH3-209ENST00000532600 C22orf46C9J442 243 aa15.77■□□□□ 0.12
SSH3-209ENST00000532600 J3QRE1 110 aa15.77■□□□□ 0.12
SSH3-209ENST00000532600 LYNP07948 512 aa15.77■□□□□ 0.12
SSH3-209ENST00000532600 FPR2P25090 351 aa15.77■□□□□ 0.12
SSH3-209ENST00000532600 PITPNBP48739 271 aa15.77■□□□□ 0.12
SSH3-209ENST00000532600 CX3CR1P49238 355 aa15.77■□□□□ 0.12
SSH3-209ENST00000532600 GNB2P62879 340 aa15.77■□□□□ 0.12
SSH3-209ENST00000532600 ACTG1P63261 375 aa15.77■□□□□ 0.12
SSH3-209ENST00000532600 ZNF91Q05481 1191 aa15.77■□□□□ 0.12
SSH3-209ENST00000532600 MEDAGQ5VYS4 303 aa15.77■□□□□ 0.12
SSH3-209ENST00000532600 WDR25Q64LD2 544 aaPredicted RBP15.77■□□□□ 0.12
SSH3-209ENST00000532600 IZUMO2Q6UXV1 221 aa15.77■□□□□ 0.12
SSH3-209ENST00000532600 DCDC5Q6ZRR9 648 aa15.77■□□□□ 0.12
SSH3-209ENST00000532600 ZNF826PQ6ZT77 177 aa15.77■□□□□ 0.12
SSH3-209ENST00000532600 SSX6Q7RTT6 188 aa15.77■□□□□ 0.12
SSH3-209ENST00000532600 SLC35F2Q8IXU6 374 aa15.77■□□□□ 0.12
SSH3-209ENST00000532600 OR8B3Q8NGG8 313 aa15.77■□□□□ 0.12
SSH3-209ENST00000532600 THEM6Q8WUY1 208 aa15.77■□□□□ 0.12
SSH3-209ENST00000532600 SGK3Q96BR1 496 aa15.77■□□□□ 0.12
SSH3-209ENST00000532600 RNFT2Q96EX2 444 aa15.77■□□□□ 0.12
SSH3-209ENST00000532600 OR8B2Q96RD0 313 aa15.77■□□□□ 0.12
SSH3-209ENST00000532600 JMJD8Q96S16 334 aa15.77■□□□□ 0.12
SSH3-209ENST00000532600 TTTY10Q9BZA0 68 aa15.77■□□□□ 0.12
SSH3-209ENST00000532600 SLC22A4Q9H015 551 aa15.77■□□□□ 0.12
SSH3-209ENST00000532600 AMBNQ9NP70 447 aa15.77■□□□□ 0.12
SSH3-209ENST00000532600 IGHV3OR16-10A0A075B7F0 116 aa15.76■□□□□ 0.11
SSH3-209ENST00000532600 KIR2DS1A0A191URI9 304 aa15.76■□□□□ 0.11
SSH3-209ENST00000532600 MAGEB4O15481 346 aaPredicted RBP15.76■□□□□ 0.11
SSH3-209ENST00000532600 MPZL2O60487 215 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms