RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 FJX1Q86VR8 437 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 BAGE3Q86Y29 109 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 BAGE2Q86Y30 109 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 KLHDC1Q8N7A1 406 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 GPR32P1Q8NGA4 272 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 LYSMD1Q96S90 227 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 NMNAT2Q9BZQ4 307 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 NRSN2Q9GZP1 204 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 MTHFD2LQ9H903 347 aaPredicted RBP6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 CMC2Q9NRP2 79 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 HEBP2Q9Y5Z4 205 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 CFAP54Q96N23 3096 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 DSPPQ9NZW4 1301 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 CELSR3Q9NYQ7 3312 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 LOC102724200A0A096LPH7 203 aaPredicted RBP6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 C9orf170A2RU37 121 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 DVL2O14641 736 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 NSA2O95478 260 aaKnown RBP6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 NUDT14O95848 222 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 C1QCP02747 245 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 TRGC1P0CF51 173 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 ZNF10P21506 573 aaPredicted RBP6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 S100A7P31151 101 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 SULT1A2P50226 295 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 PCBP3P57721 371 aaKnown RBP6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 SRSF3P84103 164 aaKnown RBP6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 PRAMEF8Q5VWM4 474 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 PRAMEF7Q5VXH5 474 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 OLIG3Q7RTU3 272 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 PRSS35Q8N3Z0 413 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 CSNK1A1LQ8N752 337 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 OR8U1Q8NH10 309 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 IFI44Q8TCB0 444 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 STT3BQ8TCJ2 826 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 TMEM255BQ8WV15 326 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 OR6C1Q96RD1 312 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 ALKBH4Q9NXW9 302 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 BET1LQ9NYM9 111 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 MOKQ9UQ07 419 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 ROS1P08922 2347 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 EPG5Q9HCE0 2579 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 OR6C6A6NF89 314 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 ZNF727A8MUV8 499 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 H3BQ15 152 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 OPN1MWP04001 364 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 CD14P08571 375 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 OPN1MW2P0DN77 364 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 OPN1MW3P0DN78 364 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 ST6GAL1P15907 406 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 OTX2P32243 289 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 CD200P41217 278 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 NPY4RP50391 375 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 DLK1P80370 383 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 IL10RAQ13651 578 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 ISXQ2M1V0 245 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 C2orf68Q2NKX9 166 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 FAM71E1Q6IPT2 247 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 ZNF770Q6IQ21 691 aaPredicted RBP6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 LEG1Q6P5S2 330 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 NXPE4Q6UWF7 544 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 GRINAQ7Z429 371 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 SULF2Q8IWU5 870 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 ZDHHC22Q8N966 263 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 ZNF709Q8N972 641 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 NECAP1Q8NC96 275 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 TMEM104Q8NE00 496 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 ZNF738Q8NE65 137 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 OR10A7Q8NGE5 316 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 GPX8Q8TED1 209 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 OR8D2Q9GZM6 311 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 CENPMQ9NSP4 180 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 ZNF701Q9NV72 531 aaPredicted RBP6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 AK3Q9UIJ7 227 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 CCDC88CQ9P219 2028 aa6.1□□□□□ -1.43
TGFBR3-209ENST00000532540 SCN3AQ9NY46 2000 aa6.09□□□□□ -1.43
TGFBR3-209ENST00000532540 TMEM212A6NML5 194 aa6.09□□□□□ -1.43
TGFBR3-209ENST00000532540 DUS4LO95620 317 aaKnown RBP6.09□□□□□ -1.43
TGFBR3-209ENST00000532540 ITGB2P05107 769 aa6.09□□□□□ -1.43
TGFBR3-209ENST00000532540 GUCA1AP43080 201 aaPredicted RBP6.09□□□□□ -1.43
TGFBR3-209ENST00000532540 LPAR6P43657 344 aa6.09□□□□□ -1.43
TGFBR3-209ENST00000532540 EFNB1P98172 346 aa6.09□□□□□ -1.43
TGFBR3-209ENST00000532540 SQSTM1Q13501 440 aa6.09□□□□□ -1.43
TGFBR3-209ENST00000532540 NR0B2Q15466 257 aa6.09□□□□□ -1.43
TGFBR3-209ENST00000532540 TMEM255AQ5JRV8 349 aa6.09□□□□□ -1.43
TGFBR3-209ENST00000532540 DNLZQ5SXM8 178 aa6.09□□□□□ -1.43
TGFBR3-209ENST00000532540 METRNLQ641Q3 311 aa6.09□□□□□ -1.43
TGFBR3-209ENST00000532540 PMS2CLQ68D20 193 aa6.09□□□□□ -1.43
TGFBR3-209ENST00000532540 DMKNQ6E0U4 476 aaPredicted RBP6.09□□□□□ -1.43
TGFBR3-209ENST00000532540 PRR27Q6MZM9 219 aa6.09□□□□□ -1.43
TGFBR3-209ENST00000532540 FAM199XQ6PEV8 388 aaPredicted RBP6.09□□□□□ -1.43
TGFBR3-209ENST00000532540 FBXW12Q6X9E4 464 aa6.09□□□□□ -1.43
TGFBR3-209ENST00000532540 GDF7Q7Z4P5 450 aa6.09□□□□□ -1.43
TGFBR3-209ENST00000532540 PLXDC1Q8IUK5 500 aa6.09□□□□□ -1.43
TGFBR3-209ENST00000532540 CPEB3Q8NE35 698 aaKnown RBP6.09□□□□□ -1.43
TGFBR3-209ENST00000532540 OR9A4Q8NGU2 314 aa6.09□□□□□ -1.43
TGFBR3-209ENST00000532540 MCHR2Q969V1 340 aa6.09□□□□□ -1.43
TGFBR3-209ENST00000532540 C16orf58Q96GQ5 468 aa6.09□□□□□ -1.43
TGFBR3-209ENST00000532540 TBX15Q96SF7 602 aa6.09□□□□□ -1.43
TGFBR3-209ENST00000532540 PCBD2Q9H0N5 130 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms