RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 OR6V1Q8N148 313 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 SVOPLQ8N434 492 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 C2orf73Q8N5S3 287 aaPredicted RBP2.66□□□□□ -1.98
PTPRK-220ENST00000531466 METTL13Q8N6R0 699 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 Q8N9L7 120 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 NOXO1Q8NFA2 376 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 OR4K2Q8NGD2 314 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 OR8J3Q8NGG0 315 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 OR5L2Q8NGL0 311 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 OR9A2Q8NGT5 310 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 OR2Y1Q8NGV0 311 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 OR13D1Q8NGV5 346 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 OR51F2Q8NH61 342 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 KIR2DL5BQ8NHK3 375 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 C8orf46Q8TAG6 207 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 CXorf40BQ96DE9 158 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 BPIFA2Q96DR5 249 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 MED8Q96G25 268 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 CENPNQ96H22 339 aaPredicted RBP2.66□□□□□ -1.98
PTPRK-220ENST00000531466 TMEM56Q96MV1 263 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 ALKBH3Q96Q83 286 aaPredicted RBP2.66□□□□□ -1.98
PTPRK-220ENST00000531466 OR5M11Q96RB7 305 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 MBOAT4Q96T53 435 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 S1PR3Q99500 378 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 GGACTQ9BVM4 153 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 NXF2Q9GZY0 626 aaKnown RBP2.66□□□□□ -1.98
PTPRK-220ENST00000531466 ARL6Q9H0F7 186 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 TXNIPQ9H3M7 391 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 RNF41Q9H4P4 317 aaPredicted RBP2.66□□□□□ -1.98
PTPRK-220ENST00000531466 FAM96AQ9H5X1 160 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 FNDC4Q9H6D8 234 aaPredicted RBP2.66□□□□□ -1.98
PTPRK-220ENST00000531466 ARMC7Q9H6L4 198 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 PRSS16Q9NQE7 514 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 GLTPQ9NZD2 209 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 GNG12Q9UBI6 72 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 MIOXQ9UGB7 285 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 COPS3Q9UNS2 423 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 ANGPT4Q9Y264 503 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 L3MBTL1Q9Y468 752 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 TMEM56-RWDD3S4R434 201 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 CAMSAP1Q5T5Y3 1602 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 ZNF609O15014 1411 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 WRNQ14191 1432 aaPredicted RBP eCLIP2.66□□□□□ -1.98
PTPRK-220ENST00000531466 ARHGAP31Q2M1Z3 1444 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 ADGRA3Q8IWK6 1321 aa2.66□□□□□ -1.98
PTPRK-220ENST00000531466 EIF4G3O43432 1585 aaKnown RBP2.66□□□□□ -1.98
PTPRK-220ENST00000531466 FGD5Q6ZNL6 1462 aa2.65□□□□□ -1.98
PTPRK-220ENST00000531466 IFT140Q96RY7 1462 aa2.65□□□□□ -1.98
PTPRK-220ENST00000531466 CCDC7Q96M83 1385 aa2.65□□□□□ -1.98
PTPRK-220ENST00000531466 ZNF816-ZNF321PA0A0X1KG74 233 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 RNF212BA8MTL3 300 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 C21orf140B9A014 251 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 TCP10L2B9ZVM9 353 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 C5orf58C9J3I9 102 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 PPP5D1E7EU14 171 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 ANHXE9PGG2 379 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 SLC17A3O00476 420 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 CASKO14936 926 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 PPP1R2P9O14990 202 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 MSH4O15457 936 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 SLC16A7O60669 478 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 GGCTO75223 188 aaKnown RBP2.65□□□□□ -1.99
PTPRK-220ENST00000531466 RP2O75695 350 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 MT-CO2P00403 227 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 ZNF35P13682 527 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 QARSP47897 775 aaKnown RBP2.65□□□□□ -1.99
PTPRK-220ENST00000531466 PSMD8P48556 350 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 SERPINB10P48595 397 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 NOVA1P51513 510 aaKnown RBP2.65□□□□□ -1.99
PTPRK-220ENST00000531466 EFNB2P52799 333 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 CRYBA4P53673 196 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 RAG2P55895 527 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 RAB25P57735 213 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 TCTAP57738 103 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 HMGCS1Q01581 520 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 SLC10A7Q0GE19 358 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 PRPSAP1Q14558 356 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 SPHARQ15513 63 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 GRK1Q15835 563 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 ATP6V1FQ16864 119 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 ARHGAP11BQ3KRB8 267 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 CDNFQ49AH0 187 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 GGTA1PQ4G0N0 100 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 LIN52Q52LA3 116 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 SPIN4Q56A73 249 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 LPCAT3Q6P1A2 487 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 SPNS3Q6ZMD2 512 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 Q6ZVQ6 151 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 TCF24Q7RTU0 167 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 OLIG3Q7RTU3 272 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 C6orf120Q7Z4R8 191 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 WDFY1Q8IWB7 410 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 LRRC18Q8N456 261 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 OR1M1Q8NGA1 313 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 OR6K6Q8NGW6 343 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 OR10K1Q8NGX5 313 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 OR52E5Q8NH55 327 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 OR1F12Q8NHA8 337 aa2.65□□□□□ -1.99
PTPRK-220ENST00000531466 RNASEH2CQ8TDP1 164 aaKnown RBP2.65□□□□□ -1.99
PTPRK-220ENST00000531466 RNF138Q8WVD3 245 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms