RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 CST4P01036 141 aa12.97□□□□□ -0.33
CCS-206ENST00000530961 UBCP0CG48 685 aaKnown RBP12.97□□□□□ -0.33
CCS-206ENST00000530961 CCL1P22362 96 aa12.97□□□□□ -0.33
CCS-206ENST00000530961 GNALP38405 381 aa12.97□□□□□ -0.33
CCS-206ENST00000530961 TGM4P49221 684 aa12.97□□□□□ -0.33
CCS-206ENST00000530961 TNK1Q13470 666 aa12.97□□□□□ -0.33
CCS-206ENST00000530961 OR8G1Q15617 311 aa12.97□□□□□ -0.33
CCS-206ENST00000530961 CCDC58Q4VC31 144 aa12.97□□□□□ -0.33
CCS-206ENST00000530961 WDR38Q5JTN6 314 aa12.97□□□□□ -0.33
CCS-206ENST00000530961 TMEM244Q5VVB8 128 aa12.97□□□□□ -0.33
CCS-206ENST00000530961 RNLSQ5VYX0 342 aa12.97□□□□□ -0.33
CCS-206ENST00000530961 Q6ZSR3 168 aa12.97□□□□□ -0.33
CCS-206ENST00000530961 AHSA2Q719I0 299 aa12.97□□□□□ -0.33
CCS-206ENST00000530961 DOK3Q7L591 496 aa12.97□□□□□ -0.33
CCS-206ENST00000530961 PRSS35Q8N3Z0 413 aa12.97□□□□□ -0.33
CCS-206ENST00000530961 OR52N1Q8NH53 320 aa12.97□□□□□ -0.33
CCS-206ENST00000530961 C10orf105Q8TEF2 133 aa12.97□□□□□ -0.33
CCS-206ENST00000530961 FAM71F1Q96KD3 344 aaPredicted RBP12.97□□□□□ -0.33
CCS-206ENST00000530961 OR2V2Q96R30 315 aa12.97□□□□□ -0.33
CCS-206ENST00000530961 CHODLQ9H9P2 273 aa12.97□□□□□ -0.33
CCS-206ENST00000530961 FRRS1LQ9P0K9 344 aa12.97□□□□□ -0.33
CCS-206ENST00000530961 RHBDD3Q9Y3P4 386 aa12.97□□□□□ -0.33
CCS-206ENST00000530961 MPC1Q9Y5U8 109 aa12.97□□□□□ -0.33
CCS-206ENST00000530961 A0A1B0GTI1 187 aa12.96□□□□□ -0.33
CCS-206ENST00000530961 A0A1B0GVI7 797 aa12.96□□□□□ -0.33
CCS-206ENST00000530961 PTGES3LE9PB15 166 aa12.96□□□□□ -0.33
CCS-206ENST00000530961 P2RY10O00398 339 aa12.96□□□□□ -0.33
CCS-206ENST00000530961 SYT7O43581 403 aa12.96□□□□□ -0.33
CCS-206ENST00000530961 HLA-DPB1P04440 258 aa12.96□□□□□ -0.33
CCS-206ENST00000530961 ISG15P05161 165 aa12.96□□□□□ -0.33
CCS-206ENST00000530961 CDK1P06493 297 aa12.96□□□□□ -0.33
CCS-206ENST00000530961 SLC25A16P16260 332 aa12.96□□□□□ -0.33
CCS-206ENST00000530961 ZNF12P17014 697 aa12.96□□□□□ -0.33
CCS-206ENST00000530961 COL8A2P25067 703 aa12.96□□□□□ -0.33
CCS-206ENST00000530961 ACKR3P25106 362 aa12.96□□□□□ -0.33
CCS-206ENST00000530961 GIFP27352 417 aa12.96□□□□□ -0.33
CCS-206ENST00000530961 C21orf33P30042 268 aaPredicted RBP12.96□□□□□ -0.33
CCS-206ENST00000530961 ALKBH1Q13686 389 aaKnown RBP12.96□□□□□ -0.33
CCS-206ENST00000530961 CARTPTQ16568 116 aa12.96□□□□□ -0.33
CCS-206ENST00000530961 HFEQ30201 348 aa12.96□□□□□ -0.33
CCS-206ENST00000530961 OR10AD1Q8NGE0 317 aa12.96□□□□□ -0.33
CCS-206ENST00000530961 ERGIC1Q969X5 290 aa12.96□□□□□ -0.33
CCS-206ENST00000530961 MEGF10Q96KG7 1140 aa12.96□□□□□ -0.33
CCS-206ENST00000530961 PIMREGQ9BSJ6 248 aa12.96□□□□□ -0.33
CCS-206ENST00000530961 SOX7Q9BT81 388 aa12.96□□□□□ -0.33
CCS-206ENST00000530961 ADAT1Q9BUB4 502 aaKnown RBP12.96□□□□□ -0.33
CCS-206ENST00000530961 PAPOLGQ9BWT3 736 aaKnown RBP12.96□□□□□ -0.33
CCS-206ENST00000530961 DUSP21Q9H596 190 aa12.96□□□□□ -0.33
CCS-206ENST00000530961 C14orf119Q9NWQ9 140 aa12.96□□□□□ -0.33
CCS-206ENST00000530961 BABAM2Q9NXR7 383 aa12.96□□□□□ -0.33
CCS-206ENST00000530961 CLEC2DQ9UHP7 191 aa12.96□□□□□ -0.33
CCS-206ENST00000530961 ENPP5Q9UJA9 477 aa12.96□□□□□ -0.33
CCS-206ENST00000530961 BLOC1S6Q9UL45 172 aa12.96□□□□□ -0.33
CCS-206ENST00000530961 ERGIC3Q9Y282 383 aa12.96□□□□□ -0.33
CCS-206ENST00000530961 HRNRQ86YZ3 2850 aaPredicted RBP12.96□□□□□ -0.34
CCS-206ENST00000530961 AKAP6Q13023 2319 aa12.96□□□□□ -0.34
CCS-206ENST00000530961 ZNF816-ZNF321PA0A0X1KG74 233 aa12.95□□□□□ -0.34
CCS-206ENST00000530961 ANXA2P2A6NMY6 339 aa12.95□□□□□ -0.34
CCS-206ENST00000530961 F5H5P2 479 aa12.95□□□□□ -0.34
CCS-206ENST00000530961 H0YL77 283 aa12.95□□□□□ -0.34
CCS-206ENST00000530961 IFNL4K9M1U5 179 aa12.95□□□□□ -0.34
CCS-206ENST00000530961 CDC14BO60729 498 aa12.95□□□□□ -0.34
CCS-206ENST00000530961 RP2O75695 350 aa12.95□□□□□ -0.34
CCS-206ENST00000530961 PTBP3O95758 552 aaKnown RBP12.95□□□□□ -0.34
CCS-206ENST00000530961 CRHBPP24387 322 aa12.95□□□□□ -0.34
CCS-206ENST00000530961 CD200P41217 278 aa12.95□□□□□ -0.34
CCS-206ENST00000530961 KIR3DL2P43630 455 aa12.95□□□□□ -0.34
CCS-206ENST00000530961 GATA4P43694 442 aa12.95□□□□□ -0.34
CCS-206ENST00000530961 NANOS3P60323 173 aaKnown RBP12.95□□□□□ -0.34
CCS-206ENST00000530961 SLC35A2P78381 396 aa12.95□□□□□ -0.34
CCS-206ENST00000530961 MVKQ03426 396 aa12.95□□□□□ -0.34
CCS-206ENST00000530961 SLC3A1Q07837 685 aa12.95□□□□□ -0.34
CCS-206ENST00000530961 RIN1Q13671 783 aa12.95□□□□□ -0.34
CCS-206ENST00000530961 RBM48Q5RL73 367 aaKnown RBP12.95□□□□□ -0.34
CCS-206ENST00000530961 OR2G6Q5TZ20 316 aa12.95□□□□□ -0.34
CCS-206ENST00000530961 RPL22L1Q6P5R6 122 aaKnown RBP12.95□□□□□ -0.34
CCS-206ENST00000530961 OR14K1Q8NGZ2 314 aa12.95□□□□□ -0.34
CCS-206ENST00000530961 OR8S1Q8NH09 359 aa12.95□□□□□ -0.34
CCS-206ENST00000530961 ITLN1Q8WWA0 313 aa12.95□□□□□ -0.34
CCS-206ENST00000530961 CCL17Q92583 94 aa12.95□□□□□ -0.34
CCS-206ENST00000530961 YIPF5Q969M3 257 aa12.95□□□□□ -0.34
CCS-206ENST00000530961 C10orf35Q96D05 121 aa12.95□□□□□ -0.34
CCS-206ENST00000530961 CDCA4Q9BXL8 241 aa12.95□□□□□ -0.34
CCS-206ENST00000530961 PPP1R3CQ9UQK1 317 aa12.95□□□□□ -0.34
CCS-206ENST00000530961 PCDHGB5Q9Y5G0 923 aa12.95□□□□□ -0.34
CCS-206ENST00000530961 V9GYS6 101 aa12.95□□□□□ -0.34
CCS-206ENST00000530961 FLNAP21333 2647 aaKnown RBP12.95□□□□□ -0.34
CCS-206ENST00000530961 ZNF469Q96JG9 3925 aaPredicted RBP12.94□□□□□ -0.34
CCS-206ENST00000530961 IGHV4-30-2A0A087WSY4 118 aa12.94□□□□□ -0.34
CCS-206ENST00000530961 TRIM64A6NGJ6 449 aa12.94□□□□□ -0.34
CCS-206ENST00000530961 TRIM64BA6NI03 449 aa12.94□□□□□ -0.34
CCS-206ENST00000530961 TMEM212A6NML5 194 aa12.94□□□□□ -0.34
CCS-206ENST00000530961 OR4C45A6NMZ5 311 aa12.94□□□□□ -0.34
CCS-206ENST00000530961 LYNX1G3V0Z9 82 aa12.94□□□□□ -0.34
CCS-206ENST00000530961 LYNX1P0DP58 116 aa12.94□□□□□ -0.34
CCS-206ENST00000530961 NR4A2P43354 598 aa12.94□□□□□ -0.34
CCS-206ENST00000530961 MAB21L1Q13394 359 aa12.94□□□□□ -0.34
CCS-206ENST00000530961 ODF4Q2M2E3 257 aa12.94□□□□□ -0.34
CCS-206ENST00000530961 ZNF676Q8N7Q3 588 aa12.94□□□□□ -0.34
CCS-206ENST00000530961 GATAD2BQ8WXI9 593 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms