RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 REEP5Q00765 189 aa7.23□□□□□ -1.25
CSDE1-214ENST00000530886 COL10A1Q03692 680 aa7.23□□□□□ -1.25
CSDE1-214ENST00000530886 ZNF117Q03924 483 aa7.23□□□□□ -1.25
CSDE1-214ENST00000530886 OR5I1Q13606 314 aa7.23□□□□□ -1.25
CSDE1-214ENST00000530886 COL9A2Q14055 689 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-214ENST00000530886 ICAM4Q14773 271 aa7.23□□□□□ -1.25
CSDE1-214ENST00000530886 Q7L0L9 218 aa7.23□□□□□ -1.25
CSDE1-214ENST00000530886 HS6ST3Q8IZP7 471 aa7.23□□□□□ -1.25
CSDE1-214ENST00000530886 NUP43Q8NFH3 380 aa7.23□□□□□ -1.25
CSDE1-214ENST00000530886 OR4K13Q8NH42 304 aa7.23□□□□□ -1.25
CSDE1-214ENST00000530886 OR51A7Q8NH64 312 aa7.23□□□□□ -1.25
CSDE1-214ENST00000530886 MARCH1Q8TCQ1 289 aa7.23□□□□□ -1.25
CSDE1-214ENST00000530886 ZNF689Q96CS4 500 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-214ENST00000530886 SLC35A4Q96G79 324 aa7.23□□□□□ -1.25
CSDE1-214ENST00000530886 GPX7Q96SL4 187 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-214ENST00000530886 IMMP2LQ96T52 175 aa7.23□□□□□ -1.25
CSDE1-214ENST00000530886 SERINC1Q9NRX5 453 aa7.23□□□□□ -1.25
CSDE1-214ENST00000530886 P4HTMQ9NXG6 502 aa7.23□□□□□ -1.25
CSDE1-214ENST00000530886 FKBP11Q9NYL4 201 aa7.23□□□□□ -1.25
CSDE1-214ENST00000530886 CLEC4EQ9ULY5 219 aa7.23□□□□□ -1.25
CSDE1-214ENST00000530886 XKRY2A2RUG3 117 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 XKRYO14609 159 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 SCAF4O95104 1147 aaKnown RBP7.22□□□□□ -1.25
CSDE1-214ENST00000530886 RPL4P36578 427 aaKnown RBP7.22□□□□□ -1.25
CSDE1-214ENST00000530886 RAB7AP51149 207 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 PRKAG1P54619 331 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 RND3P61587 244 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 BTG2P78543 158 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 RUNX2Q13950 521 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 PCK2Q16822 640 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 ATP6V1FQ16864 119 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 PRAMEF14Q5SWL7 426 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 LINC00114Q6XXX2 140 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 FAM185AQ8N0U4 392 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 TMEM156Q8N614 296 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 TMEM104Q8NE00 496 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 CORO2AQ92828 525 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 FGGYQ96C11 551 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 C4orf45Q96LM5 186 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 HIST1H2AAQ96QV6 131 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 NKX3-1Q99801 234 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-214ENST00000530886 NAGKQ9UJ70 344 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 CES1P1Q9UKY3 287 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 RAB22AQ9UL26 194 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 A0A0B4J2E0 115 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 CENPVL1A0A0U1RR11 272 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 A0A1B0GX12 115 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 ZNF860A6NHJ4 632 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 GPR137BO60478 399 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 DDNO94850 711 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-214ENST00000530886 DBIP07108 87 aaKnown RBP7.22□□□□□ -1.25
CSDE1-214ENST00000530886 EPHA8P29322 1005 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-214ENST00000530886 ENPP2Q13822 863 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 CLLU1OSQ5K130 101 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 C16orf54Q6UWD8 224 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 TEX43Q6ZNM6 134 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 RTN4RL1Q86UN2 441 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-214ENST00000530886 LHFPL1Q86WI0 220 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 C11orf42Q8N5U0 333 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 OR5T1Q8NG75 326 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 THOC3Q96J01 351 aaKnown RBP7.22□□□□□ -1.25
CSDE1-214ENST00000530886 AIF1LQ9BQI0 150 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 CD84Q9UIB8 345 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 A0A087WV62 115 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 A0A1W2PS29 197 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 MEGF11A6BM72 1044 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 A6NIZ1 184 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 SLC38A8A6NNN8 435 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 E5RGE8 158 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 CCL25O15444 150 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 FHITP49789 147 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 NOVA1P51513 510 aaKnown RBP7.22□□□□□ -1.25
CSDE1-214ENST00000530886 PRPS1P60891 318 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 ETFRF1Q6IPR1 90 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 CENPVQ7Z7K6 275 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-214ENST00000530886 ZNF676Q8N7Q3 588 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 OR13C9Q8NGT0 318 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 OVCA2Q8WZ82 227 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 CNRIP1Q96F85 164 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-214ENST00000530886 SLC22A12Q96S37 553 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 RTBDNQ9BSG5 229 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-214ENST00000530886 GRHPRQ9UBQ7 328 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 CYP8B1Q9UNU6 501 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 KLHDC2Q9Y2U9 406 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 NSG2Q9Y328 171 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 COLEC10Q9Y6Z7 277 aa7.22□□□□□ -1.25
CSDE1-214ENST00000530886 YPEL1O60688 119 aa7.21□□□□□ -1.25
CSDE1-214ENST00000530886 IFNA6P05013 189 aa7.21□□□□□ -1.25
CSDE1-214ENST00000530886 CSN2P05814 226 aa7.21□□□□□ -1.25
CSDE1-214ENST00000530886 NID1P14543 1247 aa7.21□□□□□ -1.25
CSDE1-214ENST00000530886 APOBEC3AP31941 199 aaPredicted RBP7.21□□□□□ -1.25
CSDE1-214ENST00000530886 S100A10P60903 97 aa7.21□□□□□ -1.25
CSDE1-214ENST00000530886 C4orf17Q53FE4 359 aa7.21□□□□□ -1.25
CSDE1-214ENST00000530886 TMEM225Q6GV28 225 aa7.21□□□□□ -1.25
CSDE1-214ENST00000530886 OGFOD3Q6PK18 319 aa7.21□□□□□ -1.25
CSDE1-214ENST00000530886 OR51A4Q8NGJ6 313 aa7.21□□□□□ -1.25
CSDE1-214ENST00000530886 OR10AC1Q8NH08 325 aa7.21□□□□□ -1.25
CSDE1-214ENST00000530886 ERGIC1Q969X5 290 aa7.21□□□□□ -1.25
CSDE1-214ENST00000530886 RBMXL1Q96E39 390 aaKnown RBP7.21□□□□□ -1.25
CSDE1-214ENST00000530886 SLC35E1Q96K37 410 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms