RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 PLPP7Q8NBV4 271 aa11.9□□□□□ -0.5
USF1-209ENST00000529476 CSNK2A3Q8NEV1 391 aa11.9□□□□□ -0.5
USF1-209ENST00000529476 SEMA6DQ8NFY4 1073 aa11.9□□□□□ -0.5
USF1-209ENST00000529476 HAVCR2Q8TDQ0 301 aa11.9□□□□□ -0.5
USF1-209ENST00000529476 NEU4Q8WWR8 484 aaPredicted RBP11.9□□□□□ -0.5
USF1-209ENST00000529476 FOXC2Q99958 501 aa11.9□□□□□ -0.5
USF1-209ENST00000529476 MND1Q9BWT6 205 aa11.9□□□□□ -0.5
USF1-209ENST00000529476 YTHDF1Q9BYJ9 559 aaKnown RBP11.9□□□□□ -0.5
USF1-209ENST00000529476 TRIM36Q9NQ86 728 aa11.9□□□□□ -0.5
USF1-209ENST00000529476 NKIRAS2Q9NYR9 191 aa11.9□□□□□ -0.5
USF1-209ENST00000529476 LSM2Q9Y333 95 aaKnown RBP11.9□□□□□ -0.5
USF1-209ENST00000529476 ACANP16112 2415 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 TRBV2A0A0J9YWF9 115 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 A0A1B0GWJ7 208 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 F5H5P2 479 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 OGG1O15527 345 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 TPD52L2O43399 206 aaKnown RBP11.89□□□□□ -0.51
USF1-209ENST00000529476 SYT7O43581 403 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 SSX4O60224 188 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 LMX1BO60663 402 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 MTRF1O75570 445 aaKnown RBP11.89□□□□□ -0.51
USF1-209ENST00000529476 ZFPL1O95159 310 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 ATP6V1B1P15313 513 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 FAHP16930 419 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 MAP2K4P45985 399 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 CDH15P55291 814 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 TNFAIP6P98066 277 aaPredicted RBP11.89□□□□□ -0.51
USF1-209ENST00000529476 CDK5R1Q15078 307 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 OR8G1Q15617 311 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 CCDC58Q4VC31 144 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 TMEM244Q5VVB8 128 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 Q6ZSR3 168 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 OR14K1Q8NGZ2 314 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 OR10AC1Q8NH08 325 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 OR5AK2Q8NH90 309 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 RPS4Y2Q8TD47 263 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 OR5M11Q96RB7 305 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 DIRC2Q96SL1 478 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 PDCD1LG2Q9BQ51 273 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 ADAT1Q9BUB4 502 aaKnown RBP11.89□□□□□ -0.51
USF1-209ENST00000529476 PAPOLGQ9BWT3 736 aaKnown RBP11.89□□□□□ -0.51
USF1-209ENST00000529476 BARX1Q9HBU1 254 aaPredicted RBP11.89□□□□□ -0.51
USF1-209ENST00000529476 DECR2Q9NUI1 292 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 PIGLQ9Y2B2 252 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 V9GYS6 101 aa11.89□□□□□ -0.51
USF1-209ENST00000529476 IGHV3-64DA0A0J9YX35 117 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 ZNF816-ZNF321PA0A0X1KG74 233 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 A6NIN4 97 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 TMEM212A6NML5 194 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 LYNX1G3V0Z9 82 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 CST4P01036 141 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 ISG15P05161 165 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 CD55P08174 381 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 LYNX1P0DP58 116 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 DAOP14920 347 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 ACHEP22303 614 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 TNFSF4P23510 183 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 RIPPLY1Q0D2K3 151 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 SPHARQ15513 63 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 MED22Q15528 200 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 FAM209AQ5JX71 171 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 Q5PR19 223 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 KRTAP1-3Q8IUG1 177 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 ZNF525Q8N782 197 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 OR51A4Q8NGJ6 313 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 ITLN1Q8WWA0 313 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 PIGCQ92535 297 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 OR2V2Q96R30 315 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 SLC22A4Q9H015 551 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 CXXC4Q9H2H0 198 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 SAP30LQ9HAJ7 183 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 HHLA2Q9UM44 414 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 LRCH1Q9Y2L9 728 aa11.88□□□□□ -0.51
USF1-209ENST00000529476 TANC2Q9HCD6 1990 aa11.87□□□□□ -0.51
USF1-209ENST00000529476 PNMA8CA0A1B0GUJ8 204 aa11.87□□□□□ -0.51
USF1-209ENST00000529476 ZNF850A8MQ14 1090 aa11.87□□□□□ -0.51
USF1-209ENST00000529476 GMDSO60547 372 aa11.87□□□□□ -0.51
USF1-209ENST00000529476 CDC14BO60729 498 aa11.87□□□□□ -0.51
USF1-209ENST00000529476 GNALP38405 381 aa11.87□□□□□ -0.51
USF1-209ENST00000529476 TAS2R43P59537 309 aa11.87□□□□□ -0.51
USF1-209ENST00000529476 SLC3A1Q07837 685 aa11.87□□□□□ -0.51
USF1-209ENST00000529476 HNRNPA0Q13151 305 aaKnown RBP11.87□□□□□ -0.51
USF1-209ENST00000529476 PRDX4Q13162 271 aa11.87□□□□□ -0.51
USF1-209ENST00000529476 ZBTB37Q5TC79 503 aa11.87□□□□□ -0.51
USF1-209ENST00000529476 DMKNQ6E0U4 476 aaPredicted RBP11.87□□□□□ -0.51
USF1-209ENST00000529476 TGIF2LYQ8IUE0 185 aa11.87□□□□□ -0.51
USF1-209ENST00000529476 FTMTQ8N4E7 242 aa11.87□□□□□ -0.51
USF1-209ENST00000529476 UBASH3BQ8TF42 649 aa11.87□□□□□ -0.51
USF1-209ENST00000529476 RGP1Q92546 391 aaPredicted RBP11.87□□□□□ -0.51
USF1-209ENST00000529476 ITFG2Q969R8 447 aa11.87□□□□□ -0.51
USF1-209ENST00000529476 SMIM19Q96E16 107 aa11.87□□□□□ -0.51
USF1-209ENST00000529476 MEGF10Q96KG7 1140 aa11.87□□□□□ -0.51
USF1-209ENST00000529476 EGLN1Q9GZT9 426 aa11.87□□□□□ -0.51
USF1-209ENST00000529476 COMMD4Q9H0A8 199 aa11.87□□□□□ -0.51
USF1-209ENST00000529476 IL19Q9UHD0 177 aa11.87□□□□□ -0.51
USF1-209ENST00000529476 ENPP5Q9UJA9 477 aa11.87□□□□□ -0.51
USF1-209ENST00000529476 DYSFO75923 2080 aa11.87□□□□□ -0.51
USF1-209ENST00000529476 DHRS7CA6NNS2 312 aa11.86□□□□□ -0.51
USF1-209ENST00000529476 COL8A2P25067 703 aa11.86□□□□□ -0.51
USF1-209ENST00000529476 RBMXP38159 391 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms