RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 TMEM236Q5W0B7 351 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 RUSC1-AS1Q66K80 236 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 FAHD1Q6P587 224 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 DCDC5Q6ZRR9 648 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 OR5AS1Q8N127 324 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 LINC01356Q8N9X3 169 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 ATG16L2Q8NAA4 619 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 OR8G5Q8NG78 346 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 OR6K6Q8NGW6 343 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 OR5K1Q8NHB7 308 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 ST7LQ8TDW4 575 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 CCL17Q92583 94 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 SLAMF6Q96DU3 332 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 SUCNR1Q9BXA5 334 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 EGLN1Q9GZT9 426 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 NARFLQ9H6Q4 476 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 SLC25A19Q9HC21 320 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 MBNL3Q9NUK0 354 aaKnown RBP7.11□□□□□ -1.27
SSBP3-212ENST00000528930 DCAF16Q9NXF7 216 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 IL19Q9UHD0 177 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 WIPI2Q9Y4P8 454 aa7.11□□□□□ -1.27
SSBP3-212ENST00000528930 CLDN25C9JDP6 229 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 H0YL77 283 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 M0R135 149 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 SULT1C4O75897 302 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 LCATP04180 440 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 HMGN1P05114 100 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 SPARCP09486 303 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 SLC2A5P22732 501 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 CRISP1P54107 249 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 TMBIM6P55061 237 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 ATP6AP1Q15904 470 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 SNAI3Q3KNW1 292 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 PLBD1Q6P4A8 553 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 DPY19L4Q7Z388 723 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 GPR141Q7Z602 305 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 TIGD4Q8IY51 512 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 PARP8Q8N3A8 854 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 ZNF283Q8N7M2 679 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 OR2Z1Q8NG97 314 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 ITLN1Q8WWA0 313 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 LRTOMTQ8WZ04 291 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 SPTSSAQ969W0 71 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 ZNF799Q96GE5 643 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 PLEKHA8Q96JA3 519 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 AMELYQ99218 206 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 KCNJ15Q99712 375 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 NEURL2Q9BR09 285 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 SLC30A2Q9BRI3 323 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 OR51V1Q9H2C8 321 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 ZNF556Q9HAH1 456 aa7.1□□□□□ -1.27
SSBP3-212ENST00000528930 CCDC160A6NGH7 325 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 B4DSR2 109 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 ZNF878C9JN71 531 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 PRR23D1E9PI22 279 aaPredicted RBP7.09□□□□□ -1.27
SSBP3-212ENST00000528930 IGHV2-5P01817 119 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 OCM2P0CE71 109 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 OCMP0CE72 109 aaPredicted RBP7.09□□□□□ -1.27
SSBP3-212ENST00000528930 PRR23D2P0DMB1 279 aaPredicted RBP7.09□□□□□ -1.27
SSBP3-212ENST00000528930 TNFRSF1AP19438 455 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 FASP25445 335 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 PRKXP51817 358 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 EFNB1P98172 346 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 ZNF92Q03936 586 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 SLC3A1Q07837 685 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 SRSF4Q08170 494 aaKnown RBP7.09□□□□□ -1.27
SSBP3-212ENST00000528930 EIF2B1Q14232 305 aaKnown RBP7.09□□□□□ -1.27
SSBP3-212ENST00000528930 PTGES3Q15185 160 aaKnown RBP7.09□□□□□ -1.27
SSBP3-212ENST00000528930 KDM4DQ6B0I6 523 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 DRAM2Q6UX65 266 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 SPATC1Q76KD6 591 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 AMIGO2Q86SJ2 522 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 CPOQ8IVL8 374 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 BBS1Q8NFJ9 593 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 OR13G1Q8NGZ3 307 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 OR2AE1Q8NHA4 323 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 RNF133Q8WVZ7 376 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 TFAP2CQ92754 450 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 RAB1CQ92928 201 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 OTULINQ96BN8 352 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 ZNF582Q96NG8 517 aaPredicted RBP7.09□□□□□ -1.27
SSBP3-212ENST00000528930 OR2V2Q96R30 315 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 SIGLEC11Q96RL6 698 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 INTS14Q96SY0 518 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 CITED1Q99966 193 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 RBM4BQ9BQ04 359 aaKnown RBP7.09□□□□□ -1.27
SSBP3-212ENST00000528930 ABHD6Q9BV23 337 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 KRTAP4-5Q9BYR2 181 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 GABARAPL1Q9H0R8 117 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 ZNF665Q9H7R5 613 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 GCM1Q9NP62 436 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 CENPMQ9NSP4 180 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 TMEM106BQ9NUM4 274 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 ERGIC3Q9Y282 383 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 NPTNQ9Y639 398 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 U3KQE9 123 aa7.09□□□□□ -1.27
SSBP3-212ENST00000528930 LYSTQ99698 3801 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 DNAH9Q9NYC9 4486 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.08□□□□□ -1.28
SSBP3-212ENST00000528930 F5H5P2 479 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms