RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 LPAR5Q9H1C0 372 aa12.9□□□□□ -0.34
ECHDC1-220ENST00000528402 MYOZ1Q9NP98 299 aaPredicted RBP12.9□□□□□ -0.34
ECHDC1-220ENST00000528402 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.9□□□□□ -0.345e-12■■■■■ 43.9
ECHDC1-220ENST00000528402 SLC7A10Q9NS82 523 aa12.9□□□□□ -0.34
ECHDC1-220ENST00000528402 OTOGLQ3ZCN5 2332 aa12.89□□□□□ -0.35
ECHDC1-220ENST00000528402 MEIKINA0A087WXM9 373 aa12.89□□□□□ -0.35
ECHDC1-220ENST00000528402 UBE2QL1A1L167 161 aa12.89□□□□□ -0.35
ECHDC1-220ENST00000528402 ZNF891A8MT65 544 aaPredicted RBP12.89□□□□□ -0.35
ECHDC1-220ENST00000528402 E9PLN8 166 aa12.89□□□□□ -0.35
ECHDC1-220ENST00000528402 CA11O75493 328 aa12.89□□□□□ -0.35
ECHDC1-220ENST00000528402 CD3DP04234 171 aa12.89□□□□□ -0.35
ECHDC1-220ENST00000528402 DBHP09172 617 aa12.89□□□□□ -0.35
ECHDC1-220ENST00000528402 ARF1P84077 181 aaKnown RBP12.89□□□□□ -0.35
ECHDC1-220ENST00000528402 FAM89BQ8N5H3 189 aa12.89□□□□□ -0.35
ECHDC1-220ENST00000528402 FNDC9Q8TBE3 224 aa12.89□□□□□ -0.35
ECHDC1-220ENST00000528402 ZFAND1Q8TCF1 268 aa12.89□□□□□ -0.35
ECHDC1-220ENST00000528402 ASB13Q8WXK3 278 aa12.89□□□□□ -0.35
ECHDC1-220ENST00000528402 WDYHV1Q96HA8 205 aa12.89□□□□□ -0.35
ECHDC1-220ENST00000528402 C1orf147Q96MC9 270 aaPredicted RBP12.89□□□□□ -0.35
ECHDC1-220ENST00000528402 PRRT1Q99946 306 aa12.89□□□□□ -0.35
ECHDC1-220ENST00000528402 C1QTNF5Q9BXJ0 243 aa12.89□□□□□ -0.35
ECHDC1-220ENST00000528402 GON7Q9BXV9 100 aa12.89□□□□□ -0.35
ECHDC1-220ENST00000528402 BEX2Q9BXY8 128 aa12.89□□□□□ -0.35
ECHDC1-220ENST00000528402 SLA2Q9H6Q3 261 aa12.89□□□□□ -0.35
ECHDC1-220ENST00000528402 CALHM2Q9HA72 323 aa12.89□□□□□ -0.35
ECHDC1-220ENST00000528402 PCDHB16Q9NRJ7 776 aa12.89□□□□□ -0.35
ECHDC1-220ENST00000528402 SLC2A8Q9NY64 477 aa12.89□□□□□ -0.35
ECHDC1-220ENST00000528402 ZNF222Q9UK12 451 aa12.89□□□□□ -0.35
ECHDC1-220ENST00000528402 PLEKHA6Q9Y2H5 1048 aa12.89□□□□□ -0.35
ECHDC1-220ENST00000528402 NPTNQ9Y639 398 aa12.89□□□□□ -0.35
ECHDC1-220ENST00000528402 PTPRBP23467 1997 aa12.89□□□□□ -0.35
ECHDC1-220ENST00000528402 TRAV17A0A0B4J275 112 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 ZNF780AO75290 641 aaPredicted RBP12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 MPIG6BO95866 241 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 OR3A4PP47883 348 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 VEGFCP49767 419 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 RTP5Q14D33 572 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 UBE2V2Q15819 145 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 MOGAT2Q3SYC2 334 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 ACTBL2Q562R1 376 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 CLVS2Q5SYC1 327 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 ATP1A1-AS1Q5TC04 95 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 ZNF626Q68DY1 528 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 TMEM42Q69YG0 159 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 TMEM53Q6P2H8 277 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 FJX1Q86VR8 437 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 PRSS33Q8NF86 280 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 AKR7LQ8NHP1 331 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 SPSB4Q96A44 273 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 RAB3CQ96E17 227 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 TM2D1Q9BX74 207 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 SELENOIQ9C0D9 397 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 MYEF2Q9P2K5 600 aaKnown RBP12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 FLVCR2Q9UPI3 526 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 TMEM235A6NFC5 223 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 NKX2-8O15522 239 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 IGHG3P01860 377 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 SERPINA5P05154 406 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 FAHP16930 419 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 CCL11P51671 97 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 GNG2P59768 71 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 RPS27AP62979 156 aaKnown RBP12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 SNAI3Q3KNW1 292 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 PABPC1L2AQ5JQF8 200 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 COLCA1Q6ZS62 124 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 LHFPL2Q6ZUX7 228 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 NCCRP1Q6ZVX7 275 aaPredicted RBP12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 TRAPPC6BQ86SZ2 158 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 OR11H7Q8NGC8 314 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 OR51S1Q8NGJ8 323 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 DEFB127Q9H1M4 99 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 OPA3Q9H6K4 179 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 IFT46Q9NQC8 304 aa12.88□□□□□ -0.35
ECHDC1-220ENST00000528402 CRTAPO75718 401 aaPredicted RBP12.87□□□□□ -0.35
ECHDC1-220ENST00000528402 HPXP02790 462 aa12.87□□□□□ -0.35
ECHDC1-220ENST00000528402 HIST1H1DP16402 221 aaKnown RBP12.87□□□□□ -0.35
ECHDC1-220ENST00000528402 NAT1P18440 290 aa12.87□□□□□ -0.35
ECHDC1-220ENST00000528402 CPT2P23786 658 aa12.87□□□□□ -0.35
ECHDC1-220ENST00000528402 FUT6P51993 359 aa12.87□□□□□ -0.35
ECHDC1-220ENST00000528402 PLP2Q04941 152 aa12.87□□□□□ -0.35
ECHDC1-220ENST00000528402 RNASE10Q5GAN6 216 aaKnown RBP12.87□□□□□ -0.35
ECHDC1-220ENST00000528402 SLC36A1Q7Z2H8 476 aa12.87□□□□□ -0.35
ECHDC1-220ENST00000528402 OR8S1Q8NH09 359 aa12.87□□□□□ -0.35
ECHDC1-220ENST00000528402 TNFAIP8L1Q8WVP5 186 aa12.87□□□□□ -0.35
ECHDC1-220ENST00000528402 NANOS1Q8WY41 292 aaKnown RBP12.87□□□□□ -0.35
ECHDC1-220ENST00000528402 RADILQ96JH8 1075 aa12.87□□□□□ -0.35
ECHDC1-220ENST00000528402 NKX3-1Q99801 234 aaPredicted RBP12.87□□□□□ -0.35
ECHDC1-220ENST00000528402 GAL3ST1Q99999 423 aa12.87□□□□□ -0.35
ECHDC1-220ENST00000528402 ZNF436Q9C0F3 470 aaPredicted RBP12.87□□□□□ -0.35
ECHDC1-220ENST00000528402 METTL9Q9H1A3 318 aa12.87□□□□□ -0.35
ECHDC1-220ENST00000528402 ANAPC10Q9UM13 185 aa12.87□□□□□ -0.35
ECHDC1-220ENST00000528402 SLC7A11Q9UPY5 501 aa12.87□□□□□ -0.35
ECHDC1-220ENST00000528402 TTC28Q96AY4 2481 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 ZNF816-ZNF321PA0A0X1KG74 233 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 hCG_38984A0A1B0GV85 526 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 C5orf63A6NC05 138 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 SLC22A20A6NK97 555 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 SERPINE3A8MV23 424 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 PYCARD-AS1I3L0S3 204 aa12.86□□□□□ -0.35
ECHDC1-220ENST00000528402 TM4SF5O14894 197 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms