RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 DMRTB1Q96MA1 342 aa8.03□□□□□ -1.12
CHD7-208ENST00000528280 ZMAT3Q9HA38 289 aaKnown RBP8.03□□□□□ -1.12
CHD7-208ENST00000528280 MMP26Q9NRE1 261 aa8.03□□□□□ -1.12
CHD7-208ENST00000528280 KRT84Q9NSB2 600 aa8.03□□□□□ -1.12
CHD7-208ENST00000528280 C1orf123Q9NWV4 160 aa8.03□□□□□ -1.12
CHD7-208ENST00000528280 IGHV2-70DA0A0C4DH43 119 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 IGHV3-64DA0A0J9YX35 117 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 A0A0U1RQV5 110 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 hCG_38984A0A1B0GV85 526 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 TMEM269A0A1B0GVZ9 245 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 hCG_1807616A0A1W2PRN6 198 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 OOEPA6NGQ2 149 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 SLC22A31A6NKX4 558 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 TMEM210A6NLX4 147 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 GPR37O15354 613 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 ENSAO43768 121 aaKnown RBP8.02□□□□□ -1.13
CHD7-208ENST00000528280 SELENOFO60613 162 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 MTRF1O75570 445 aaKnown RBP8.02□□□□□ -1.13
CHD7-208ENST00000528280 ZNF205O95201 554 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 VENTXO95231 258 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 CST4P01036 141 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 FSHBP01225 129 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 LHBP01229 141 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 PSKH1P11801 424 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 SLC2A5P22732 501 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 CD80P33681 288 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 VHLP40337 213 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 ROM1Q03395 351 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 SLC34A1Q06495 639 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 MICBQ29980 383 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 PRAMEF6Q5VXH4 476 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 WDR25Q64LD2 544 aaPredicted RBP8.02□□□□□ -1.13
CHD7-208ENST00000528280 C12orf54Q6X4T0 127 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 MEPCEQ7L2J0 689 aaKnown RBP8.02□□□□□ -1.13
CHD7-208ENST00000528280 ZNF679Q8IYX0 411 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 PNLDC1Q8NA58 520 aaKnown RBP8.02□□□□□ -1.13
CHD7-208ENST00000528280 C12orf43Q96C57 262 aaKnown RBP8.02□□□□□ -1.13
CHD7-208ENST00000528280 CENPNQ96H22 339 aaPredicted RBP8.02□□□□□ -1.13
CHD7-208ENST00000528280 RTL8AQ9BWD3 113 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 MS4A7Q9GZW8 240 aaPredicted RBP8.02□□□□□ -1.13
CHD7-208ENST00000528280 BRD7Q9NPI1 651 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 HAO2Q9NYQ3 351 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 DNAJC27Q9NZQ0 273 aa8.02□□□□□ -1.13
CHD7-208ENST00000528280 TNFRSF13BO14836 293 aaPredicted RBP8.01□□□□□ -1.13
CHD7-208ENST00000528280 RIDAP52758 137 aaKnown RBP8.01□□□□□ -1.13
CHD7-208ENST00000528280 PRSS12P56730 875 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 PSMA6P60900 246 aaKnown RBP8.01□□□□□ -1.13
CHD7-208ENST00000528280 SEC61A1P61619 476 aaKnown RBP8.01□□□□□ -1.13
CHD7-208ENST00000528280 EFNB1P98172 346 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 PAX2Q02962 417 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 TMED1Q13445 227 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 ZNF829Q3KNS6 432 aaPredicted RBP8.01□□□□□ -1.13
CHD7-208ENST00000528280 ZBTB37Q5TC79 503 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 SLX4IPQ5VYV7 408 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 NXNL2Q5VZ03 156 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 TEX36Q5VZQ5 186 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 KDM4DQ6B0I6 523 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 KRT74Q7RTS7 529 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 SLC36A1Q7Z2H8 476 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 GID4Q8IVV7 300 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 BOLLQ8N9W6 283 aaKnown RBP8.01□□□□□ -1.13
CHD7-208ENST00000528280 SEMA6DQ8NFY4 1073 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 OR1M1Q8NGA1 313 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 OR10Z1Q8NGY1 313 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 ZNF671Q8TAW3 534 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 FAM81AQ8TBF8 368 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 TMEM163Q8TC26 289 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 GCDHQ92947 438 aaPredicted RBP8.01□□□□□ -1.13
CHD7-208ENST00000528280 DVL3Q92997 716 aaPredicted RBP8.01□□□□□ -1.13
CHD7-208ENST00000528280 UPRTQ96BW1 309 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 RNF170Q96K19 258 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 AMELYQ99218 206 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 CNN2Q99439 309 aaKnown RBP8.01□□□□□ -1.13
CHD7-208ENST00000528280 NUDT16L1Q9BRJ7 211 aaKnown RBP8.01□□□□□ -1.13
CHD7-208ENST00000528280 PAPOLGQ9BWT3 736 aaKnown RBP8.01□□□□□ -1.13
CHD7-208ENST00000528280 GABARAPL1Q9H0R8 117 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 DNTTIP1Q9H147 329 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 VCX3BQ9H321 246 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 KAAG1Q9UBP8 84 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 RHBDD3Q9Y3P4 386 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 LRP12Q9Y561 859 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 WNK2Q9Y3S1 2297 aa8.01□□□□□ -1.13
CHD7-208ENST00000528280 C5orf63A6NC05 138 aa8□□□□□ -1.13
CHD7-208ENST00000528280 ZAR1LA6NP61 321 aa8□□□□□ -1.13
CHD7-208ENST00000528280 ZNF670-ZNF695F2Z2N8 137 aa8□□□□□ -1.13
CHD7-208ENST00000528280 C3orf80F5H4A9 247 aa8□□□□□ -1.13
CHD7-208ENST00000528280 P2RY10O00398 339 aa8□□□□□ -1.13
CHD7-208ENST00000528280 ADAM20O43506 726 aa8□□□□□ -1.13
CHD7-208ENST00000528280 COMPP49747 757 aaPredicted RBP8□□□□□ -1.13
CHD7-208ENST00000528280 EGR3Q06889 387 aa8□□□□□ -1.13
CHD7-208ENST00000528280 RIPPLY1Q0D2K3 151 aa8□□□□□ -1.13
CHD7-208ENST00000528280 POU4F2Q12837 409 aa8□□□□□ -1.13
CHD7-208ENST00000528280 GFOD2Q3B7J2 385 aa8□□□□□ -1.13
CHD7-208ENST00000528280 FAM76BQ5HYJ3 339 aa8□□□□□ -1.13
CHD7-208ENST00000528280 FAM201AQ5SY85 155 aa8□□□□□ -1.13
CHD7-208ENST00000528280 SFRP4Q6FHJ7 346 aaPredicted RBP8□□□□□ -1.13
CHD7-208ENST00000528280 ZFP1Q6P2D0 407 aa8□□□□□ -1.13
CHD7-208ENST00000528280 LYPD2Q6UXB3 125 aa8□□□□□ -1.13
CHD7-208ENST00000528280 ZNF841Q6ZN19 808 aa8□□□□□ -1.13
CHD7-208ENST00000528280 C9orf139Q6ZV77 190 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms