RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 COPS3Q9UNS2 423 aa12.97□□□□□ -0.33
CAPN1-213ENST00000527897 POLR3KQ9Y2Y1 108 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-213ENST00000527897 IGHV3OR16-10A0A075B7F0 116 aa12.96□□□□□ -0.33
CAPN1-213ENST00000527897 A0A0A6YYJ9 748 aa12.96□□□□□ -0.33
CAPN1-213ENST00000527897 TRAV38-1A0A0B4J264 116 aa12.96□□□□□ -0.33
CAPN1-213ENST00000527897 IGHV2-70DA0A0C4DH43 119 aa12.96□□□□□ -0.33
CAPN1-213ENST00000527897 TMEM269A0A1B0GVZ9 245 aa12.96□□□□□ -0.33
CAPN1-213ENST00000527897 OOEPA6NGQ2 149 aa12.96□□□□□ -0.33
CAPN1-213ENST00000527897 ANXA2P2A6NMY6 339 aa12.96□□□□□ -0.33
CAPN1-213ENST00000527897 ZNF850A8MQ14 1090 aa12.96□□□□□ -0.33
CAPN1-213ENST00000527897 FPR2P25090 351 aa12.96□□□□□ -0.33
CAPN1-213ENST00000527897 ACKR3P25106 362 aa12.96□□□□□ -0.33
CAPN1-213ENST00000527897 PRDX4Q13162 271 aa12.96□□□□□ -0.33
CAPN1-213ENST00000527897 SNCBQ16143 134 aa12.96□□□□□ -0.33
CAPN1-213ENST00000527897 WDR25Q64LD2 544 aaPredicted RBP12.96□□□□□ -0.33
CAPN1-213ENST00000527897 C12orf73Q69YU5 71 aa12.96□□□□□ -0.33
CAPN1-213ENST00000527897 WDR86Q86TI4 376 aa12.96□□□□□ -0.33
CAPN1-213ENST00000527897 SEMA6DQ8NFY4 1073 aa12.96□□□□□ -0.33
CAPN1-213ENST00000527897 OR1M1Q8NGA1 313 aa12.96□□□□□ -0.33
CAPN1-213ENST00000527897 TMEM163Q8TC26 289 aa12.96□□□□□ -0.33
CAPN1-213ENST00000527897 LRRC29Q8WV35 223 aa12.96□□□□□ -0.33
CAPN1-213ENST00000527897 RAB40AQ8WXH6 277 aa12.96□□□□□ -0.33
CAPN1-213ENST00000527897 DUS3LQ96G46 650 aaKnown RBP12.96□□□□□ -0.33
CAPN1-213ENST00000527897 CENPNQ96H22 339 aaPredicted RBP12.96□□□□□ -0.33
CAPN1-213ENST00000527897 MICU1Q9BPX6 476 aa12.96□□□□□ -0.33
CAPN1-213ENST00000527897 GABARAPL1Q9H0R8 117 aa12.96□□□□□ -0.33
CAPN1-213ENST00000527897 ERVK-18Q9QC07 812 aa12.96□□□□□ -0.33
CAPN1-213ENST00000527897 ENOPH1Q9UHY7 261 aa12.96□□□□□ -0.33
CAPN1-213ENST00000527897 TMEM14AQ9Y6G1 99 aa12.96□□□□□ -0.33
CAPN1-213ENST00000527897 SLC22A31A6NKX4 558 aa12.95□□□□□ -0.34
CAPN1-213ENST00000527897 PRR32B1ATL7 298 aa12.95□□□□□ -0.34
CAPN1-213ENST00000527897 PHYHO14832 338 aa12.95□□□□□ -0.34
CAPN1-213ENST00000527897 FSTL3O95633 263 aa12.95□□□□□ -0.34
CAPN1-213ENST00000527897 PTBP3O95758 552 aaKnown RBP12.95□□□□□ -0.34
CAPN1-213ENST00000527897 EGR1P18146 543 aa12.95□□□□□ -0.34
CAPN1-213ENST00000527897 CPT2P23786 658 aa12.95□□□□□ -0.34
CAPN1-213ENST00000527897 POLR2IP36954 125 aaKnown RBP12.95□□□□□ -0.34
CAPN1-213ENST00000527897 RIDAP52758 137 aaKnown RBP12.95□□□□□ -0.34
CAPN1-213ENST00000527897 CXCR4P61073 352 aa12.95□□□□□ -0.34
CAPN1-213ENST00000527897 ACTG1P63261 375 aa12.95□□□□□ -0.34
CAPN1-213ENST00000527897 IL5RAQ01344 420 aa12.95□□□□□ -0.34
CAPN1-213ENST00000527897 SLC35F2Q8IXU6 374 aa12.95□□□□□ -0.34
CAPN1-213ENST00000527897 GCSAMQ8N6F7 178 aa12.95□□□□□ -0.34
CAPN1-213ENST00000527897 ASB17Q8WXJ9 295 aa12.95□□□□□ -0.34
CAPN1-213ENST00000527897 FAM71F1Q96KD3 344 aaPredicted RBP12.95□□□□□ -0.34
CAPN1-213ENST00000527897 OR8B4Q96RC9 309 aa12.95□□□□□ -0.34
CAPN1-213ENST00000527897 JMJD8Q96S16 334 aa12.95□□□□□ -0.34
CAPN1-213ENST00000527897 TBX5Q99593 518 aa12.95□□□□□ -0.34
CAPN1-213ENST00000527897 NUDT16L1Q9BRJ7 211 aaKnown RBP12.95□□□□□ -0.34
CAPN1-213ENST00000527897 RTL8AQ9BWD3 113 aa12.95□□□□□ -0.34
CAPN1-213ENST00000527897 RASSF4Q9H2L5 321 aa12.95□□□□□ -0.34
CAPN1-213ENST00000527897 TRIM36Q9NQ86 728 aa12.95□□□□□ -0.34
CAPN1-213ENST00000527897 CTSZQ9UBR2 303 aa12.95□□□□□ -0.34
CAPN1-213ENST00000527897 NUP50Q9UKX7 468 aa12.95□□□□□ -0.34
CAPN1-213ENST00000527897 ZNF670-ZNF695F2Z2N8 137 aa12.94□□□□□ -0.34
CAPN1-213ENST00000527897 CDIPTO14735 213 aa12.94□□□□□ -0.34
CAPN1-213ENST00000527897 MAGEB4O15481 346 aaPredicted RBP12.94□□□□□ -0.34
CAPN1-213ENST00000527897 APOL3O95236 402 aa12.94□□□□□ -0.34
CAPN1-213ENST00000527897 FSHBP01225 129 aa12.94□□□□□ -0.34
CAPN1-213ENST00000527897 HILS1P60008 231 aa12.94□□□□□ -0.34
CAPN1-213ENST00000527897 PAX8Q06710 450 aa12.94□□□□□ -0.34
CAPN1-213ENST00000527897 KPNB1Q14974 876 aaKnown RBP12.94□□□□□ -0.34
CAPN1-213ENST00000527897 ZNF829Q3KNS6 432 aaPredicted RBP12.94□□□□□ -0.34
CAPN1-213ENST00000527897 KLF17Q5JT82 389 aaPredicted RBP12.94□□□□□ -0.34
CAPN1-213ENST00000527897 AADACL4Q5VUY2 407 aa12.94□□□□□ -0.34
CAPN1-213ENST00000527897 NXNL2Q5VZ03 156 aa12.94□□□□□ -0.34
CAPN1-213ENST00000527897 DEGS2Q6QHC5 323 aa12.94□□□□□ -0.34
CAPN1-213ENST00000527897 ZNF322Q6U7Q0 402 aaPredicted RBP12.94□□□□□ -0.34
CAPN1-213ENST00000527897 RBMS3Q6XE24 437 aaKnown RBP12.94□□□□□ -0.34
CAPN1-213ENST00000527897 PLEKHG7Q6ZR37 379 aa12.94□□□□□ -0.34
CAPN1-213ENST00000527897 ASRGL1Q7L266 308 aa12.94□□□□□ -0.34
CAPN1-213ENST00000527897 FAM90A1Q86YD7 464 aa12.94□□□□□ -0.34
CAPN1-213ENST00000527897 GID4Q8IVV7 300 aa12.94□□□□□ -0.34
CAPN1-213ENST00000527897 ZNF679Q8IYX0 411 aa12.94□□□□□ -0.34
CAPN1-213ENST00000527897 OR51G2Q8NGK0 314 aa12.94□□□□□ -0.34
CAPN1-213ENST00000527897 RNF170Q96K19 258 aa12.94□□□□□ -0.34
CAPN1-213ENST00000527897 HIST1H2AAQ96QV6 131 aa12.94□□□□□ -0.34
CAPN1-213ENST00000527897 PKP2Q99959 881 aa12.94□□□□□ -0.34
CAPN1-213ENST00000527897 APOL4Q9BPW4 351 aa12.94□□□□□ -0.34
CAPN1-213ENST00000527897 MS4A7Q9GZW8 240 aaPredicted RBP12.94□□□□□ -0.34
CAPN1-213ENST00000527897 PBOV1Q9GZY1 135 aa12.94□□□□□ -0.34
CAPN1-213ENST00000527897 FAM206AQ9NX38 181 aa12.94□□□□□ -0.34
CAPN1-213ENST00000527897 ZNF69Q9UC07 566 aa12.94□□□□□ -0.34
CAPN1-213ENST00000527897 MPC1Q9Y5U8 109 aa12.94□□□□□ -0.34
CAPN1-213ENST00000527897 TRAV40A0A0B4J280 105 aa12.93□□□□□ -0.34
CAPN1-213ENST00000527897 C22orf46C9J442 243 aa12.93□□□□□ -0.34
CAPN1-213ENST00000527897 TRIM77I1YAP6 450 aa12.93□□□□□ -0.34
CAPN1-213ENST00000527897 PSMB10P40306 273 aa12.93□□□□□ -0.34
CAPN1-213ENST00000527897 MAP2K3P46734 347 aa12.93□□□□□ -0.34
CAPN1-213ENST00000527897 ELF3P78545 371 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-213ENST00000527897 PAX2Q02962 417 aa12.93□□□□□ -0.34
CAPN1-213ENST00000527897 MFGE8Q08431 387 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-213ENST00000527897 MICBQ29980 383 aa12.93□□□□□ -0.34
CAPN1-213ENST00000527897 DMRTC1Q5HYR2 192 aa12.93□□□□□ -0.34
CAPN1-213ENST00000527897 CEP78Q5JTW2 689 aa12.93□□□□□ -0.34
CAPN1-213ENST00000527897 WDR82Q6UXN9 313 aa12.93□□□□□ -0.34
CAPN1-213ENST00000527897 ZNF841Q6ZN19 808 aa12.93□□□□□ -0.34
CAPN1-213ENST00000527897 USP43Q70EL4 1123 aa12.93□□□□□ -0.34
CAPN1-213ENST00000527897 THAP5Q7Z6K1 395 aa12.93□□□□□ -0.34
CAPN1-213ENST00000527897 C11orf53Q8IXP5 236 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms