RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 SMIM19Q96E16 107 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 APIPQ96GX9 242 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 IL17FQ96PD4 163 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 HIST1H2AAQ96QV6 131 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 ZNF607Q96SK3 696 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 LRFN3Q9BTN0 628 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 VAMP8Q9BV40 100 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 COA1Q9GZY4 146 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 TXNRD2Q9NNW7 524 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 LANCL2Q9NS86 450 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 ZCCHC3Q9NUD5 404 aaKnown RBP5.18□□□□□ -1.58
CD44-225ENST00000527326 P4HTMQ9NXG6 502 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 ELOVL5Q9NYP7 299 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 OR5V1Q9UGF6 321 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 ST6GALNAC2Q9UJ37 374 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 TBX21Q9UL17 535 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 RAB22AQ9UL26 194 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 SRPK3Q9UPE1 567 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 C14orf166Q9Y224 244 aaKnown RBP5.18□□□□□ -1.58
CD44-225ENST00000527326 FUT9Q9Y231 359 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 MRPS33Q9Y291 106 aaKnown RBP5.18□□□□□ -1.58
CD44-225ENST00000527326 GPR52Q9Y2T5 361 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 SHROOM3Q8TF72 1996 aa5.18□□□□□ -1.58
CD44-225ENST00000527326 NYNRINQ9P2P1 1898 aaKnown RBP5.17□□□□□ -1.58
CD44-225ENST00000527326 PDE4DIPQ5VU43 2346 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 ZNF320A2RRD8 509 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 ZNF503-AS2A6NEH8 195 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 ANTXRLA6NF34 631 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 VSTM2BA6NLU5 285 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 FAM166BA8MTA8 275 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 PRR33A8MZF0 331 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 C17orf105B2RV13 164 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 ZNF814B7Z6K7 855 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 EEF1E1-BLOC1S5C9J1V9 151 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 TRAPPC2LH3BP13 241 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 M0R296 226 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 CORTO00230 105 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 CXCL11O14625 94 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 IRAK2O43187 625 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 FRS3O43559 492 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 ALOX12BO75342 701 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 GPR32O75388 356 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 CLEC3AO75596 197 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 CNMDO75829 334 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 B3GAT3O94766 335 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 HSPB1P04792 205 aaKnown RBP5.17□□□□□ -1.58
CD44-225ENST00000527326 SLC35E2P0CK97 266 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 ZNF10P21506 573 aaPredicted RBP5.17□□□□□ -1.58
CD44-225ENST00000527326 TM4SF1P30408 202 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 PTGER3P43115 390 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 LGALS7P47929 136 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 ELLP55199 621 aaPredicted RBP5.17□□□□□ -1.58
CD44-225ENST00000527326 FAM3BP58499 235 aaPredicted RBP5.17□□□□□ -1.58
CD44-225ENST00000527326 ERVS71-1P61550 626 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 IL13RA1P78552 427 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 HLA-DRB3P79483 266 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 PAX2Q02962 417 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 TGM3Q08188 693 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 NOGQ13253 232 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 NFATC2Q13469 925 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 ENDOGQ14249 297 aaKnown RBP5.17□□□□□ -1.58
CD44-225ENST00000527326 CDK5R1Q15078 307 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 C18orf21Q32NC0 220 aaPredicted RBP5.17□□□□□ -1.58
CD44-225ENST00000527326 SNAI3Q3KNW1 292 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 CTSL3PQ5NE16 218 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 PLEKHS1Q5SXH7 462 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 RPL7L1Q6DKI1 246 aaKnown RBP5.17□□□□□ -1.58
CD44-225ENST00000527326 SBSNQ6UWP8 590 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 S100A7AQ86SG5 101 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 C20orf196Q8IYI0 205 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 TMEM99Q8N816 258 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 MORN4Q8NDC4 146 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 STXBP6Q8NFX7 210 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 OR52E1Q8NGJ3 308 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 FAM222BQ8WU58 562 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 LIN37Q96GY3 246 aaPredicted RBP5.17□□□□□ -1.58
CD44-225ENST00000527326 BTF3L4Q96K17 158 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 C4orf36Q96KX1 117 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 PRRC1Q96M27 445 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 DERL3Q96Q80 235 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 TAAR6Q96RI8 345 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 ATP6V0BQ99437 205 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 TIMP4Q99727 224 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 KLHDC3Q9BQ90 382 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 PYGO2Q9BRQ0 406 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 ALG12Q9BV10 488 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 GPR174Q9BXC1 333 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 HDAC8Q9BY41 377 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 PLA2G12AQ9BZM1 189 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 KATNBL1Q9H079 304 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 SLC32A1Q9H598 525 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 EGLN3Q9H6Z9 239 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 RAB18Q9NP72 206 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 NOX4Q9NPH5 578 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 SLC35D1Q9NTN3 355 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 VPS29Q9UBQ0 182 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 KCNK6Q9Y257 313 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 LAMTOR2Q9Y2Q5 125 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 LRP12Q9Y561 859 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 INSL6Q9Y581 213 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms