RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 OR9Q2Q8NGE9 314 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 OR5T2Q8NGG2 359 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 OR4K13Q8NH42 304 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 OR2AE1Q8NHA4 323 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 FANK1Q8TC84 345 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 DYRK2Q92630 601 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 EME1Q96AY2 570 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 ERMAPQ96PL5 475 aaPredicted RBP5.43□□□□□ -1.54
CD44-221ENST00000526000 NMNAT3Q96T66 252 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 FEVQ99581 238 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 SIRPDQ9H106 197 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 CNTD2Q9H8S5 307 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 FN3KRPQ9HA64 309 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 PAPOLBQ9NRJ5 636 aaKnown RBP5.43□□□□□ -1.54
CD44-221ENST00000526000 VNN3Q9NY84 501 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 DUX4Q9UBX2 424 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 OAZ3Q9UMX2 235 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 B9D1Q9UPM9 204 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 FOXJ3Q9UPW0 622 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 SIGLEC7Q9Y286 467 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 ANKRD61A6NGH8 418 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 TVP23AA6NH52 213 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 CD300LBA8K4G0 201 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 CLPXO76031 633 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 TXNDC12O95881 172 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 IFNGP01579 166 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 HMGN1P05114 100 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 ALPLP05186 524 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 SLC2A1P11166 492 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 SDHAP31040 664 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 PYCR1P32322 319 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 PRKXP51817 358 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 ZNF92Q03936 586 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 MALLQ13021 153 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 PDCD1Q15116 288 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 ZNF181Q2M3W8 571 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 SNAI3Q3KNW1 292 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 SLC35F1Q5T1Q4 408 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 OGFRL1Q5TC84 451 aaPredicted RBP5.42□□□□□ -1.54
CD44-221ENST00000526000 DHRS7BQ6IAN0 325 aaPredicted RBP5.42□□□□□ -1.54
CD44-221ENST00000526000 C1orf122Q6ZSJ8 110 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 VMO1Q7Z5L0 202 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 TMEM179BQ7Z7N9 219 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 OR6V1Q8N148 313 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 PNLDC1Q8NA58 520 aaKnown RBP5.42□□□□□ -1.54
CD44-221ENST00000526000 ZSCAN4Q8NAM6 433 aaPredicted RBP5.42□□□□□ -1.54
CD44-221ENST00000526000 OR2T33Q8NG76 320 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 OR2AJ1Q8NGZ0 328 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 TEX47Q8TBZ9 253 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 COQ7Q99807 217 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 WACQ9BTA9 647 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 GABARAPL3Q9BY60 117 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 PPA2Q9H2U2 334 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 OR52D1Q9H346 318 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 TOR3AQ9H497 397 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 PPP1R3EQ9H7J1 279 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 SLC25A19Q9HC21 320 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 NRIP3Q9NQ35 241 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 RPRD1BQ9NQG5 326 aaKnown RBP5.42□□□□□ -1.54
CD44-221ENST00000526000 KRT84Q9NSB2 600 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 SNTG1Q9NSN8 517 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 CENPMQ9NSP4 180 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 POMT1Q9Y6A1 747 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 VWFP04275 2813 aa5.42□□□□□ -1.54
CD44-221ENST00000526000 IGLV1-36A0A0B4J1U3 117 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 TRAV38-1A0A0B4J264 116 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 OOEPA6NGQ2 149 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 SAC3D1A6NKF1 404 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 RENP00797 406 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 LIPFP07098 398 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 SELLP14151 372 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 HIST1H1CP16403 213 aaKnown RBP5.41□□□□□ -1.54
CD44-221ENST00000526000 CPT2P23786 658 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 POU1F1P28069 291 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 GRK5P34947 590 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 CD200P41217 278 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 GATA4P43694 442 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 HSPA13P48723 471 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 DAPP51397 102 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 CRISP1P54107 249 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 TPTEP56180 551 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 FXYD6P3P58550 94 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 BPIFB3P59826 476 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 HIST1H3AP68431 136 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 IKZF1Q13422 519 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 TAF13Q15543 124 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 KCNMB1Q16558 191 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 OCLNQ16625 522 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 NSUN5P1Q3KNT7 163 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 FBLN7Q53RD9 439 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 OXLD1Q5BKU9 147 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 GLYATL3Q5SZD4 288 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 HIST2H3PS2Q5TEC6 136 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 SLC18B1Q6NT16 456 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 LYPD4Q6UWN0 246 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 GDPGP1Q6ZNW5 385 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 COLCA1Q6ZS62 124 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 HIST2H3AQ71DI3 136 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 FAM90A1Q86YD7 464 aa5.41□□□□□ -1.54
CD44-221ENST00000526000 CBR4Q8N4T8 237 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms