RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 GLRA3O75311 464 aa5.32□□□□□ -1.56
NEDD8-203ENST00000524927 KRT36O76013 467 aa5.32□□□□□ -1.56
NEDD8-203ENST00000524927 UBL3O95164 117 aa5.32□□□□□ -1.56
NEDD8-203ENST00000524927 TSPAN8P19075 237 aa5.32□□□□□ -1.56
NEDD8-203ENST00000524927 MAP3K8P41279 467 aa5.32□□□□□ -1.56
NEDD8-203ENST00000524927 TRA2BP62995 288 aaKnown RBP5.32□□□□□ -1.56
NEDD8-203ENST00000524927 TSNQ15631 228 aaKnown RBP5.32□□□□□ -1.56
NEDD8-203ENST00000524927 WDR38Q5JTN6 314 aa5.32□□□□□ -1.56
NEDD8-203ENST00000524927 ISCA2Q86U28 154 aa5.32□□□□□ -1.56
NEDD8-203ENST00000524927 ZNF584Q8IVC4 421 aa5.32□□□□□ -1.56
NEDD8-203ENST00000524927 ZNF614Q8N883 585 aa5.32□□□□□ -1.56
NEDD8-203ENST00000524927 ZNF383Q8NA42 475 aa5.32□□□□□ -1.56
NEDD8-203ENST00000524927 UXS1Q8NBZ7 420 aa5.32□□□□□ -1.56
NEDD8-203ENST00000524927 SLC30A7Q8NEW0 376 aa5.32□□□□□ -1.56
NEDD8-203ENST00000524927 GRK7Q8WTQ7 553 aa5.32□□□□□ -1.56
NEDD8-203ENST00000524927 TECTBQ96PL2 329 aa5.32□□□□□ -1.56
NEDD8-203ENST00000524927 SHCBP1LQ9BZQ2 653 aa5.32□□□□□ -1.56
NEDD8-203ENST00000524927 OR51B6Q9H340 312 aa5.32□□□□□ -1.56
NEDD8-203ENST00000524927 ZNF556Q9HAH1 456 aa5.32□□□□□ -1.56
NEDD8-203ENST00000524927 C20orf96Q9NUD7 363 aaPredicted RBP5.32□□□□□ -1.56
NEDD8-203ENST00000524927 ACER3Q9NUN7 267 aa5.32□□□□□ -1.56
NEDD8-203ENST00000524927 DDX18Q9NVP1 670 aaKnown RBP5.32□□□□□ -1.56
NEDD8-203ENST00000524927 NDE1Q9NXR1 346 aa5.32□□□□□ -1.56
NEDD8-203ENST00000524927 SURF4O15260 269 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 ST8SIA3O43173 380 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 ZNF264O43296 627 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 PRAF2O60831 178 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 KCNK2O95069 426 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 VAMP5O95183 116 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 ECDO95905 644 aaPredicted RBP5.31□□□□□ -1.56
NEDD8-203ENST00000524927 TSHBP01222 138 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 PRSS1P07477 247 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 IFI6P09912 130 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 CA6P23280 308 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 CETN2P41208 172 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 CCR4P51679 360 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 UBE2E1P51965 193 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 RAB25P57735 213 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 TAS2R39P59534 338 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 RPL23AP62750 156 aaKnown RBP5.31□□□□□ -1.56
NEDD8-203ENST00000524927 CHI3L2Q15782 390 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 FBXO48Q5FWF7 155 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 SLC35D3Q5M8T2 416 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 LIPJQ5W064 366 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 OR4A47Q6IF82 309 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 LYPD2Q6UXB3 125 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 RBM43Q6ZSC3 357 aaKnown RBP5.31□□□□□ -1.56
NEDD8-203ENST00000524927 METTL4Q8N3J2 472 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 STPG4Q8N801 248 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 ICA1LQ8NDH6 482 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 PIFOQ8TCI5 191 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 RORBQ92753 470 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 FUT8Q9BYC5 575 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 HOXD1Q9GZZ0 328 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 C1orf198Q9H425 327 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 GOLPH3Q9H4A6 298 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 ERVK-18Q9QC07 812 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 IL19Q9UHD0 177 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 PACSIN2Q9UNF0 486 aaPredicted RBP5.31□□□□□ -1.56
NEDD8-203ENST00000524927 MUC2Q02817 5179 aa5.31□□□□□ -1.56
NEDD8-203ENST00000524927 IGLV1-36A0A0B4J1U3 117 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 A0A1W2PRD5 423 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 A0A1W2PRF3 423 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 A0A1W2PRM7 423 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 FAM172BPA6NC97 362 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 RTL8CO15255 209 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 ATP6V0E1O15342 81 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 IFNB1P01574 187 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 GP9P14770 177 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 BLCAPP62952 87 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 ZNF674Q2M3X9 581 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 SMU1Q2TAY7 513 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 NDUFAF6Q330K2 333 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 HSP90AA5PQ58FG0 334 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 TMEM255AQ5JRV8 349 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 TMEM225Q6GV28 225 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 FAM45BPQ6NSW5 357 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 NOXRED1Q6NXP6 359 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 TMEM107Q6UX40 140 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 OR2W3Q7Z3T1 314 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 COMMD6Q7Z4G1 85 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 LYPD6Q86Y78 171 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 TMEM99Q8N816 258 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 CCDC63Q8NA47 563 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 FAM45AQ8TCE6 357 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 LRRC8CQ8TDW0 803 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 SLC26A7Q8TE54 656 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 EXOSC8Q96B26 276 aaKnown RBP5.3□□□□□ -1.56
NEDD8-203ENST00000524927 ATF6BQ99941 703 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 OR11A1Q9GZK7 315 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 PAK5Q9P286 719 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 TCF19Q9Y242 345 aa5.3□□□□□ -1.56
NEDD8-203ENST00000524927 LRRC30A6NM36 301 aa5.29□□□□□ -1.56
NEDD8-203ENST00000524927 C16orf90A8MZG2 172 aa5.29□□□□□ -1.56
NEDD8-203ENST00000524927 H3BSA7 217 aa5.29□□□□□ -1.56
NEDD8-203ENST00000524927 CCL24O00175 119 aa5.29□□□□□ -1.56
NEDD8-203ENST00000524927 SLC33A1O00400 549 aaPredicted RBP5.29□□□□□ -1.56
NEDD8-203ENST00000524927 PRB4P10163 310 aaPredicted RBP5.29□□□□□ -1.56
NEDD8-203ENST00000524927 MPV17P39210 176 aa5.29□□□□□ -1.56
NEDD8-203ENST00000524927 HERV-K104P61576 105 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms