RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 hCG_38984A0A1B0GV85 526 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 ANKRD30BLA7E2S9 258 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 H7C417 338 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 LDLRAD4O15165 306 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 PLA2G10O15496 165 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 DNAJC13O75165 2243 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 CRTAPO75718 401 aaPredicted RBP8.67□□□□□ -1.02
VPS13B-212ENST00000524330 IL18BPO95998 194 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 LPLP06858 475 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 GSTP1P09211 210 aaKnown RBP8.67□□□□□ -1.02
VPS13B-212ENST00000524330 TRAPPC2P0DI81 140 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 TRAPPC2BP0DI82 140 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 CBR1P16152 277 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 PTGFRP43088 359 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 KIR2DL2P43627 348 aaPredicted RBP8.67□□□□□ -1.02
VPS13B-212ENST00000524330 CBX5P45973 191 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 PTH2RP49190 550 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 CASP6P55212 293 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 RAG2P55895 527 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 MTCP1P56278 107 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 TAS2R19P59542 299 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 FAM3AP98173 230 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 PPA1Q15181 289 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 OR8B8Q15620 311 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 PNLIPRP3Q17RR3 467 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 RNASE12Q5GAN4 147 aaKnown RBP8.67□□□□□ -1.02
VPS13B-212ENST00000524330 PLCXD3Q63HM9 321 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 ASPHD2Q6ICH7 369 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 MOB3CQ70IA8 216 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 MDP1Q86V88 176 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 GCNT2Q8N0V5 402 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 DTX3Q8N9I9 347 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 C9orf106Q8NAJ2 232 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 CPEB3Q8NE35 698 aaKnown RBP8.67□□□□□ -1.02
VPS13B-212ENST00000524330 OR4D6Q8NGJ1 314 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 OR52I2Q8NH67 350 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 FGFBP3Q8TAT2 258 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 PIGCQ92535 297 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 POM121L2Q96KW2 1035 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 CACNG6Q9BXT2 260 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 PIGMQ9H3S5 423 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 AUNIPQ9H7T9 357 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 ELL3Q9HB65 397 aaPredicted RBP8.67□□□□□ -1.02
VPS13B-212ENST00000524330 GPR173Q9NS66 373 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 MTFP1Q9UDX5 166 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 WASF3Q9UPY6 502 aa8.67□□□□□ -1.02
VPS13B-212ENST00000524330 RBMX2Q9Y388 322 aaKnown RBP8.67□□□□□ -1.02
VPS13B-212ENST00000524330 ZFHX2Q9C0A1 2572 aaPredicted RBP8.67□□□□□ -1.02
VPS13B-212ENST00000524330 ZNF407Q9C0G0 2248 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 NCOA6Q14686 2063 aaPredicted RBP8.66□□□□□ -1.02
VPS13B-212ENST00000524330 ANKRD20A5PA0PJZ0 165 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 TMEM14DPA8MWL7 114 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 PRSS44E7EML9 344 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 INMT-MINDY4F8WBC2 141 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 GMDSO60547 372 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 RAD51DO75771 328 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 MPIG6BO95866 241 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 CST4P01036 141 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 AKAIN1P0CW23 69 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 TMEM225BP0DP42 221 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 SFTPCP11686 197 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 COX5AP20674 150 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 IGHV1-2P23083 117 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 CPT2P23786 658 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 IL32P24001 234 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 OPRM1P35372 400 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 KIR2DL3P43628 341 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 RFX2P48378 723 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 GNG2P59768 71 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 MRPS15P82914 257 aaKnown RBP8.66□□□□□ -1.02
VPS13B-212ENST00000524330 KLF9Q13886 244 aaPredicted RBP8.66□□□□□ -1.02
VPS13B-212ENST00000524330 RSU1Q15404 277 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 GABRA6Q16445 453 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 HIKESHIQ53FT3 197 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 AGAP6Q5VW22 663 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 OLFML2AQ68BL7 652 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 PLXDC2Q6UX71 529 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 GFRALQ6UXV0 394 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 AKAP14Q86UN6 197 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 CD163Q86VB7 1156 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 LYPD6Q86Y78 171 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 ZNF584Q8IVC4 421 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 ZDHHC23Q8IYP9 409 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 ZSCAN4Q8NAM6 433 aaPredicted RBP8.66□□□□□ -1.02
VPS13B-212ENST00000524330 OR51T1Q8NGJ9 327 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 OR10R2Q8NGX6 335 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 OR2AE1Q8NHA4 323 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 CHAC2Q8WUX2 184 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 SNRNP27Q8WVK2 155 aaKnown RBP8.66□□□□□ -1.02
VPS13B-212ENST00000524330 MRPS24Q96EL2 167 aaKnown RBP8.66□□□□□ -1.02
VPS13B-212ENST00000524330 REPIN1Q9BWE0 567 aaKnown RBP8.66□□□□□ -1.02
VPS13B-212ENST00000524330 IFT46Q9NQC8 304 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 B3GNT2Q9NY97 397 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 ZNF224Q9NZL3 707 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 NLKQ9UBE8 527 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 SPEF1Q9Y4P9 236 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 MPC1Q9Y5U8 109 aa8.66□□□□□ -1.02
VPS13B-212ENST00000524330 PTPRZ1P23471 2315 aaPredicted RBP8.66□□□□□ -1.02
VPS13B-212ENST00000524330 VCANP13611 3396 aa8.65□□□□□ -1.02
VPS13B-212ENST00000524330 LOC100509620A0A075B734 347 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms