RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-223	ENST00000523125	WDR82	Q6UXN9	313 aa		10.27	□□□□□ -0.77
VEGFA-223	ENST00000523125	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	10.27	□□□□□ -0.77
VEGFA-223	ENST00000523125	OR8S1	Q8NH09	359 aa		10.27	□□□□□ -0.77
VEGFA-223	ENST00000523125	ITPKC	Q96DU7	683 aa		10.27	□□□□□ -0.77
VEGFA-223	ENST00000523125	PGAM5	Q96HS1	289 aa		10.27	□□□□□ -0.77
VEGFA-223	ENST00000523125	TECTB	Q96PL2	329 aa		10.27	□□□□□ -0.77
VEGFA-223	ENST00000523125	DUX5	Q96PT3	197 aa		10.27	□□□□□ -0.77
VEGFA-223	ENST00000523125	TEAD3	Q99594	435 aa		10.27	□□□□□ -0.77
VEGFA-223	ENST00000523125	FGF23	Q9GZV9	251 aa	Predicted RBP	10.27	□□□□□ -0.77
VEGFA-223	ENST00000523125	MS4A7	Q9GZW8	240 aa	Predicted RBP	10.27	□□□□□ -0.77
VEGFA-223	ENST00000523125	MMADHC	Q9H3L0	296 aa	Predicted RBP	10.27	□□□□□ -0.77
VEGFA-223	ENST00000523125	RGCC	Q9H4X1	137 aa		10.27	□□□□□ -0.77
VEGFA-223	ENST00000523125	RNPEPL1	Q9HAU8	725 aa		10.27	□□□□□ -0.77
VEGFA-223	ENST00000523125	IGHV3OR15-7	A0A075B7D8	119 aa		10.26	□□□□□ -0.77
VEGFA-223	ENST00000523125	hCG_1807616	A0A1W2PRN6	198 aa		10.26	□□□□□ -0.77
VEGFA-223	ENST00000523125	CCDC182	A6NF36	153 aa		10.26	□□□□□ -0.77
VEGFA-223	ENST00000523125	PRR32	B1ATL7	298 aa		10.26	□□□□□ -0.77
VEGFA-223	ENST00000523125	NDUFA2	O43678	99 aa		10.26	□□□□□ -0.77
VEGFA-223	ENST00000523125	ENSA	O43768	121 aa	Known RBP	10.26	□□□□□ -0.77
VEGFA-223	ENST00000523125	CFHR2	P36980	270 aa		10.26	□□□□□ -0.77
VEGFA-223	ENST00000523125	PSMA6	P60900	246 aa	Known RBP	10.26	□□□□□ -0.77
VEGFA-223	ENST00000523125	ELF3	P78545	371 aa	Predicted RBP	10.26	□□□□□ -0.77
VEGFA-223	ENST00000523125	EFNB1	P98172	346 aa		10.26	□□□□□ -0.77
VEGFA-223	ENST00000523125	PTGES3	Q15185	160 aa	Known RBP	10.26	□□□□□ -0.77
VEGFA-223	ENST00000523125	SNAPC1	Q16533	368 aa		10.26	□□□□□ -0.77
VEGFA-223	ENST00000523125	RBMS3	Q6XE24	437 aa	Known RBP	10.26	□□□□□ -0.77
VEGFA-223	ENST00000523125	CSNK2A3	Q8NEV1	391 aa		10.26	□□□□□ -0.77
VEGFA-223	ENST00000523125	OR8B12	Q8NGG6	310 aa		10.26	□□□□□ -0.77
VEGFA-223	ENST00000523125	LRRC29	Q8WV35	223 aa		10.26	□□□□□ -0.77
VEGFA-223	ENST00000523125	DNAJC9	Q8WXX5	260 aa		10.26	□□□□□ -0.77
VEGFA-223	ENST00000523125	TLNRD1	Q9H1K6	362 aa		10.26	□□□□□ -0.77
VEGFA-223	ENST00000523125	TRIM36	Q9NQ86	728 aa		10.26	□□□□□ -0.77
VEGFA-223	ENST00000523125	PAPOLB	Q9NRJ5	636 aa	Known RBP	10.26	□□□□□ -0.77
VEGFA-223	ENST00000523125	TVP23B	Q9NYZ1	205 aa		10.26	□□□□□ -0.77
VEGFA-223	ENST00000523125	ERVK-18	Q9QC07	812 aa		10.26	□□□□□ -0.77
VEGFA-223	ENST00000523125	KAAG1	Q9UBP8	84 aa		10.26	□□□□□ -0.77
VEGFA-223	ENST00000523125	LRP12	Q9Y561	859 aa		10.26	□□□□□ -0.77
VEGFA-223	ENST00000523125	MDFIC2	A0A1B0GVS7	189 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125		A0A1B0GW55	424 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	DVL1	O14640	695 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	PRKY	O43930	277 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	MITF	O75030	526 aa	Predicted RBP	10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	CST4	P01036	141 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	SFTPB	P07988	381 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	DUX4L2	P0CJ85	424 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	DUX4L3	P0CJ86	424 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	DUX4L4	P0CJ87	422 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	DUX4L5	P0CJ88	424 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	DUX4L6	P0CJ89	424 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	DUX4L7	P0CJ90	424 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	HKR1	P10072	659 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	MMP9	P14780	707 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	EPHA2	P29317	976 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	RPS7	P62081	194 aa	Known RBP	10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	BAMBI	Q13145	260 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	SLC9A3R2	Q15599	337 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	AWAT1	Q58HT5	328 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	CD276	Q5ZPR3	534 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	DUX4L9	Q6RFH8	374 aa	Predicted RBP	10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	BRD3OS	Q6XYD6	125 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	KRT74	Q7RTS7	529 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	KRT77	Q7Z794	578 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	FGFRL1	Q8N441	504 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	GALNT4	Q8N4A0	578 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	OR5K1	Q8NHB7	308 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	OR5P3	Q8WZ94	311 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	SEH1L	Q96EE3	360 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	TBX15	Q96SF7	602 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	PAPOLG	Q9BWT3	736 aa	Known RBP	10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	YIPF3	Q9GZM5	350 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	PRDM13	Q9H4Q3	707 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	NIPAL2	Q9H841	368 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	DUX4	Q9UBX2	424 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	LAMP5	Q9UJQ1	280 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	MPC1	Q9Y5U8	109 aa		10.25	□□□□□ -0.77
VEGFA-223	ENST00000523125	ZNF850	A8MQ14	1090 aa		10.24	□□□□□ -0.77
VEGFA-223	ENST00000523125	ZNF879	B4DU55	563 aa		10.24	□□□□□ -0.77
VEGFA-223	ENST00000523125	CLDN34	H7C241	214 aa		10.24	□□□□□ -0.77
VEGFA-223	ENST00000523125		M0R129	80 aa		10.24	□□□□□ -0.77
VEGFA-223	ENST00000523125	PSMD9	O00233	223 aa		10.24	□□□□□ -0.77
VEGFA-223	ENST00000523125	CDIPT	O14735	213 aa		10.24	□□□□□ -0.77
VEGFA-223	ENST00000523125	LIPF	P07098	398 aa		10.24	□□□□□ -0.77
VEGFA-223	ENST00000523125	RNASE1	P07998	156 aa	Known RBP	10.24	□□□□□ -0.77
VEGFA-223	ENST00000523125	MRPL3	P09001	348 aa	Known RBP	10.24	□□□□□ -0.77
VEGFA-223	ENST00000523125	MUC1	P15941	1255 aa	Predicted RBP	10.24	□□□□□ -0.77
VEGFA-223	ENST00000523125	AMY2B	P19961	511 aa		10.24	□□□□□ -0.77
VEGFA-223	ENST00000523125	DCTD	P32321	178 aa		10.24	□□□□□ -0.77
VEGFA-223	ENST00000523125	GNAL	P38405	381 aa		10.24	□□□□□ -0.77
VEGFA-223	ENST00000523125	ESRRG	P62508	458 aa		10.24	□□□□□ -0.77
VEGFA-223	ENST00000523125	IL5RA	Q01344	420 aa		10.24	□□□□□ -0.77
VEGFA-223	ENST00000523125	ROM1	Q03395	351 aa		10.24	□□□□□ -0.77
VEGFA-223	ENST00000523125	PRDX4	Q13162	271 aa		10.24	□□□□□ -0.77
VEGFA-223	ENST00000523125	ATP6AP1	Q15904	470 aa		10.24	□□□□□ -0.77
VEGFA-223	ENST00000523125	FAM76B	Q5HYJ3	339 aa		10.24	□□□□□ -0.77
VEGFA-223	ENST00000523125	DEGS2	Q6QHC5	323 aa		10.24	□□□□□ -0.77
VEGFA-223	ENST00000523125	BCDIN3D	Q7Z5W3	292 aa	Known RBP	10.24	□□□□□ -0.77
VEGFA-223	ENST00000523125	C3orf56	Q8N813	242 aa		10.24	□□□□□ -0.77
VEGFA-223	ENST00000523125	HPSE2	Q8WWQ2	592 aa		10.24	□□□□□ -0.77
VEGFA-223	ENST00000523125	PKP2	Q99959	881 aa		10.24	□□□□□ -0.77
VEGFA-223	ENST00000523125	PCGF1	Q9BSM1	259 aa		10.24	□□□□□ -0.77

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