RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 OR1M1Q8NGA1 313 aa12.7□□□□□ -0.38
MRPS28-209ENST00000522987 OR4C15Q8NGM1 316 aa12.7□□□□□ -0.38
MRPS28-209ENST00000522987 FAM110DQ8TAY7 271 aaPredicted RBP12.7□□□□□ -0.38
MRPS28-209ENST00000522987 SGK3Q96BR1 496 aa12.7□□□□□ -0.38
MRPS28-209ENST00000522987 AMELYQ99218 206 aa12.7□□□□□ -0.38
MRPS28-209ENST00000522987 PKP2Q99959 881 aa12.7□□□□□ -0.38
MRPS28-209ENST00000522987 PAPOLGQ9BWT3 736 aaKnown RBP12.7□□□□□ -0.38
MRPS28-209ENST00000522987 TRIM36Q9NQ86 728 aa12.7□□□□□ -0.38
MRPS28-209ENST00000522987 ZNF319Q9P2F9 582 aa12.7□□□□□ -0.38
MRPS28-209ENST00000522987 U3KQV3 271 aa12.7□□□□□ -0.38
MRPS28-209ENST00000522987 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.69□□□□□ -0.38
MRPS28-209ENST00000522987 CDIPTO14735 213 aa12.69□□□□□ -0.38
MRPS28-209ENST00000522987 TIMM23O14925 209 aa12.69□□□□□ -0.38
MRPS28-209ENST00000522987 CCNB2O95067 398 aa12.69□□□□□ -0.38
MRPS28-209ENST00000522987 AMY2BP19961 511 aa12.69□□□□□ -0.38
MRPS28-209ENST00000522987 ZNF121P58317 390 aaPredicted RBP12.69□□□□□ -0.38
MRPS28-209ENST00000522987 TAF9Q16594 264 aa12.69□□□□□ -0.38
MRPS28-209ENST00000522987 MICBQ29980 383 aa12.69□□□□□ -0.38
MRPS28-209ENST00000522987 CDONQ4KMG0 1287 aa12.69□□□□□ -0.38
MRPS28-209ENST00000522987 WDR82Q6UXN9 313 aa12.69□□□□□ -0.38
MRPS28-209ENST00000522987 RASSF6Q6ZTQ3 369 aa12.69□□□□□ -0.38
MRPS28-209ENST00000522987 DEFB107AQ8IZN7 70 aa12.69□□□□□ -0.38
MRPS28-209ENST00000522987 IQCF1Q8N6M8 205 aa12.69□□□□□ -0.38
MRPS28-209ENST00000522987 WDR13Q9H1Z4 485 aa12.69□□□□□ -0.38
MRPS28-209ENST00000522987 TCF7L1Q9HCS4 588 aa12.69□□□□□ -0.38
MRPS28-209ENST00000522987 IL20Q9NYY1 176 aa12.69□□□□□ -0.38
MRPS28-209ENST00000522987 RHBDD3Q9Y3P4 386 aa12.69□□□□□ -0.38
MRPS28-209ENST00000522987 hCG_38984A0A1B0GV85 526 aa12.68□□□□□ -0.38
MRPS28-209ENST00000522987 GRK5P34947 590 aa12.68□□□□□ -0.38
MRPS28-209ENST00000522987 GSK3AP49840 483 aa12.68□□□□□ -0.38
MRPS28-209ENST00000522987 PROK1P58294 105 aa12.68□□□□□ -0.38
MRPS28-209ENST00000522987 MZT1Q08AG7 82 aa12.68□□□□□ -0.38
MRPS28-209ENST00000522987 KLHL12Q53G59 568 aa12.68□□□□□ -0.38
MRPS28-209ENST00000522987 ZNF770Q6IQ21 691 aaPredicted RBP12.68□□□□□ -0.38
MRPS28-209ENST00000522987 RPL13AP3Q6NVV1 102 aa12.68□□□□□ -0.38
MRPS28-209ENST00000522987 LDLRAD3Q86YD5 345 aa12.68□□□□□ -0.38
MRPS28-209ENST00000522987 RPL3LQ92901 407 aaKnown RBP12.68□□□□□ -0.38
MRPS28-209ENST00000522987 SPSB4Q96A44 273 aa12.68□□□□□ -0.38
MRPS28-209ENST00000522987 PGAM5Q96HS1 289 aa12.68□□□□□ -0.38
MRPS28-209ENST00000522987 ABHD6Q9BV23 337 aa12.68□□□□□ -0.38
MRPS28-209ENST00000522987 NMNAT2Q9BZQ4 307 aa12.68□□□□□ -0.38
MRPS28-209ENST00000522987 MMP27Q9H306 513 aa12.68□□□□□ -0.38
MRPS28-209ENST00000522987 ELL3Q9HB65 397 aaPredicted RBP12.68□□□□□ -0.38
MRPS28-209ENST00000522987 KAAG1Q9UBP8 84 aa12.68□□□□□ -0.38
MRPS28-209ENST00000522987 ZNF391Q9UJN7 358 aa12.68□□□□□ -0.38
MRPS28-209ENST00000522987 RNASEK-C17orf49H0YIS7 233 aa12.67□□□□□ -0.38
MRPS28-209ENST00000522987 AKR7A2O43488 359 aa12.67□□□□□ -0.38
MRPS28-209ENST00000522987 NDUFB3O43676 98 aa12.67□□□□□ -0.38
MRPS28-209ENST00000522987 SNX3O60493 162 aa12.67□□□□□ -0.38
MRPS28-209ENST00000522987 ECDO95905 644 aaPredicted RBP12.67□□□□□ -0.38
MRPS28-209ENST00000522987 PAX6P26367 422 aa12.67□□□□□ -0.38
MRPS28-209ENST00000522987 GNALP38405 381 aa12.67□□□□□ -0.38
MRPS28-209ENST00000522987 SLC15A1P46059 708 aa12.67□□□□□ -0.38
MRPS28-209ENST00000522987 GRB2P62993 217 aaKnown RBP12.67□□□□□ -0.38
MRPS28-209ENST00000522987 DMRTC1Q5HYR2 192 aa12.67□□□□□ -0.38
MRPS28-209ENST00000522987 LINC01590Q5TEZ4 76 aa12.67□□□□□ -0.38
MRPS28-209ENST00000522987 DHRS7BQ6IAN0 325 aaPredicted RBP12.67□□□□□ -0.38
MRPS28-209ENST00000522987 KCTD8Q6ZWB6 473 aa12.67□□□□□ -0.38
MRPS28-209ENST00000522987 INTS14Q96SY0 518 aa12.67□□□□□ -0.38
MRPS28-209ENST00000522987 OPA3Q9H6K4 179 aa12.67□□□□□ -0.38
MRPS28-209ENST00000522987 RNPEPL1Q9HAU8 725 aa12.67□□□□□ -0.38
MRPS28-209ENST00000522987 TAGLN3Q9UI15 199 aa12.67□□□□□ -0.38
MRPS28-209ENST00000522987 KPTNQ9Y664 436 aa12.67□□□□□ -0.38
MRPS28-209ENST00000522987 A0A1B0GVI7 797 aa12.66□□□□□ -0.38
MRPS28-209ENST00000522987 RIIAD1A6NNX1 92 aa12.66□□□□□ -0.38
MRPS28-209ENST00000522987 ZNF850A8MQ14 1090 aa12.66□□□□□ -0.38
MRPS28-209ENST00000522987 NPFFO15130 113 aa12.66□□□□□ -0.38
MRPS28-209ENST00000522987 PLXNB1O43157 2135 aa12.66□□□□□ -0.38
MRPS28-209ENST00000522987 KRT36O76013 467 aa12.66□□□□□ -0.38
MRPS28-209ENST00000522987 FBP1P09467 338 aa12.66□□□□□ -0.38
MRPS28-209ENST00000522987 MUC1P15941 1255 aaPredicted RBP12.66□□□□□ -0.38
MRPS28-209ENST00000522987 DDOSTP39656 456 aa12.66□□□□□ -0.38
MRPS28-209ENST00000522987 SLC25A1P53007 311 aa12.66□□□□□ -0.38
MRPS28-209ENST00000522987 EGR3Q06889 387 aa12.66□□□□□ -0.38
MRPS28-209ENST00000522987 SLC36A1Q7Z2H8 476 aa12.66□□□□□ -0.38
MRPS28-209ENST00000522987 CPLX4Q7Z7G2 160 aa12.66□□□□□ -0.38
MRPS28-209ENST00000522987 Q8N7P7 452 aa12.66□□□□□ -0.38
MRPS28-209ENST00000522987 LY6G5BQ8NDX9 201 aa12.66□□□□□ -0.38
MRPS28-209ENST00000522987 OR2T33Q8NG76 320 aa12.66□□□□□ -0.38
MRPS28-209ENST00000522987 FGF23Q9GZV9 251 aaPredicted RBP12.66□□□□□ -0.38
MRPS28-209ENST00000522987 OR51V1Q9H2C8 321 aa12.66□□□□□ -0.38
MRPS28-209ENST00000522987 DPAGT1Q9H3H5 408 aa12.66□□□□□ -0.38
MRPS28-209ENST00000522987 MED4Q9NPJ6 270 aa12.66□□□□□ -0.38
MRPS28-209ENST00000522987 ZNRD1Q9P1U0 126 aa12.66□□□□□ -0.38
MRPS28-209ENST00000522987 PRPF19Q9UMS4 504 aaKnown RBP12.66□□□□□ -0.38
MRPS28-209ENST00000522987 SIGLEC9Q9Y336 463 aa12.66□□□□□ -0.38
MRPS28-209ENST00000522987 ZNF816-ZNF321PA0A0X1KG74 233 aa12.65□□□□□ -0.38
MRPS28-209ENST00000522987 MEIOCA2RUB1 952 aa12.65□□□□□ -0.38
MRPS28-209ENST00000522987 BTBD17A6NE02 478 aa12.65□□□□□ -0.38
MRPS28-209ENST00000522987 SLC22A31A6NKX4 558 aa12.65□□□□□ -0.38
MRPS28-209ENST00000522987 SELENOFO60613 162 aa12.65□□□□□ -0.38
MRPS28-209ENST00000522987 CLPXO76031 633 aa12.65□□□□□ -0.38
MRPS28-209ENST00000522987 IFNGP01579 166 aa12.65□□□□□ -0.38
MRPS28-209ENST00000522987 H2BFMP0C1H6 154 aa12.65□□□□□ -0.38
MRPS28-209ENST00000522987 NDUFB7P17568 137 aa12.65□□□□□ -0.38
MRPS28-209ENST00000522987 ACKR3P25106 362 aa12.65□□□□□ -0.38
MRPS28-209ENST00000522987 POU1F1P28069 291 aa12.65□□□□□ -0.38
MRPS28-209ENST00000522987 GSTT1P30711 240 aa12.65□□□□□ -0.38
MRPS28-209ENST00000522987 NAA10P41227 235 aaPredicted RBP12.65□□□□□ -0.38
MRPS28-209ENST00000522987 HMGA2P52926 109 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms