RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 SAC3D1A6NKF1 404 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 F2RL2O00254 374 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 EI24O14681 340 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 MPPED1O15442 326 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 XPNPEP2O43895 674 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 LYPD3O95274 346 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 MT-ND1P03886 318 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 OPN1SWP03999 348 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 CSTBP04080 98 aaKnown RBP5.42□□□□□ -1.54
SDCBP-210ENST00000522843 H1F0P07305 194 aaKnown RBP5.42□□□□□ -1.54
SDCBP-210ENST00000522843 CBLP22681 906 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 MYF6P23409 242 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 RRM2P31350 389 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 IFNA8P32881 189 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 CFHR2P36980 270 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 CAPGP40121 348 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 MDH2P40926 338 aaKnown RBP5.42□□□□□ -1.54
SDCBP-210ENST00000522843 RAD23AP54725 363 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 BPIFB3P59826 476 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 CXCR4P61073 352 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 HPCAP84074 193 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 ST3GAL3Q11203 375 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 C1DQ13901 141 aaKnown RBP5.42□□□□□ -1.54
SDCBP-210ENST00000522843 ENTPD8Q5MY95 495 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 DHRS7BQ6IAN0 325 aaPredicted RBP5.42□□□□□ -1.54
SDCBP-210ENST00000522843 KRTAP5-11Q6L8G4 156 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 C1orf94Q6P1W5 598 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 ZNF613Q6PF04 617 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 ZNF841Q6ZN19 808 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 GDPGP1Q6ZNW5 385 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 Q6ZR03 302 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 C1orf122Q6ZSJ8 110 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 VRK2Q86Y07 508 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 RBM45Q8IUH3 476 aaKnown RBP5.42□□□□□ -1.54
SDCBP-210ENST00000522843 OFCC1Q8IZS5 231 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 CADM2Q8N3J6 435 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 SLC22A24Q8N4F4 322 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 OR1J1Q8NGS3 322 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 SLC25A40Q8TBP6 338 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 SLC7A13Q8TCU3 470 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 TAAR8Q969N4 342 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 PRRC1Q96M27 445 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 ZNF570Q96NI8 536 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 PCGF1Q9BSM1 259 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 ZNF426Q9BUY5 554 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 GABARAPL3Q9BY60 117 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 BCL2L14Q9BZR8 327 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 EGLN1Q9GZT9 426 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 FN3KRPQ9HA64 309 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 C12orf10Q9HB07 376 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 CDH20Q9HBT6 801 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 MAN2C1Q9NTJ4 1040 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 ACOXLQ9NUZ1 547 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 FAM118AQ9NWS6 357 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 ENOPH1Q9UHY7 261 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 FBXL3Q9UKT7 428 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 NDRG4Q9ULP0 352 aaKnown RBP5.42□□□□□ -1.54
SDCBP-210ENST00000522843 V9GYQ6 96 aa5.42□□□□□ -1.54
SDCBP-210ENST00000522843 IGKV1D-42A0A075B6H8 117 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 IGHV1-69DA0A0B4J2H0 117 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 LOC100130705A0A1B0GUX0 176 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 MAGEA13PA6NCF6 341 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 TRIM64CA6NLI5 447 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 TMEM178BH3BS89 294 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 J3KTA2 159 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 E2F6O75461 281 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 GADD45GO95257 159 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 AHSA1O95433 338 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 IGHV1-69P01742 117 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 THY1P04216 161 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 MMP7P09237 267 aaPredicted RBP5.41□□□□□ -1.54
SDCBP-210ENST00000522843 RPS2P15880 293 aaKnown RBP5.41□□□□□ -1.54
SDCBP-210ENST00000522843 TNFRSF1BP20333 461 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 PRKACGP22612 351 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 GRPRP30550 384 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 IFNGR2P38484 337 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 ISL1P61371 349 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 ESRRGP62508 458 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 GNB2P62879 340 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 CSNK2BP67870 215 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 TNFAIP6P98066 277 aaPredicted RBP5.41□□□□□ -1.54
SDCBP-210ENST00000522843 TRAM2Q15035 370 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 MOGQ16653 247 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 NSUN5P1Q3KNT7 163 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 FAM201AQ5SY85 155 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 WBP2NLQ6ICG8 309 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 LYPD2Q6UXB3 125 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 ZNF836Q6ZNA1 936 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 RFPL4BQ6ZWI9 263 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 ZER1Q7Z7L7 766 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 KLHDC1Q8N7A1 406 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 RNF152Q8N8N0 203 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 WFDC9Q8NEX5 89 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 KLF14Q8TD94 323 aaPredicted RBP5.41□□□□□ -1.54
SDCBP-210ENST00000522843 ADAMTS16Q8TE57 1224 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 SLC38A4Q969I6 547 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 TMEM54Q969K7 222 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 SLC41A3Q96GZ6 507 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 MPP4Q96JB8 637 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 FEVQ99581 238 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms